Novosphingobium decolorationis: HT578_21340
Help
Entry
HT578_21340 CDS
T07993
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndr03032
]
HT578_21340
03036 Chromosome and associated proteins [BR:
ndr03036
]
HT578_21340
03400 DNA repair and recombination proteins [BR:
ndr03400
]
HT578_21340
DNA replication proteins [BR:
ndr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HT578_21340
Chromosome and associated proteins [BR:
ndr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HT578_21340
DNA repair and recombination proteins [BR:
ndr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HT578_21340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
GTP_EFTU_D2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QVM85915
UniProt:
A0ABX8EAI2
LinkDB
All DBs
Position
4629090..4629362
Genome browser
AA seq
90 aa
AA seq
DB search
MNKNDLISAVAETSGLTRNDATKAVEGVFDAITGALKKGDEVRLVGFGTFSVAKRKASTG
RNPRTGEPMEIAASSQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgatctcatcagcgctgtcgcggaaaccagcggtctgacccgcaacgat
gcgaccaaggctgtcgaaggcgtgttcgacgccatcaccggcgcgctgaagaagggcgac
gaagtgcgcctcgtcggcttcggcaccttctcggtcgccaagcgcaaggcctcgaccggc
cgcaacccgcgcaccggcgagccgatggaaatcgcggcttcgtcgcagcccaagttcaag
gccggcaagggcctcaaggacgccgtcaactaa
DBGET
integrated database retrieval system
