Novosphingobium decolorationis: HT578_21435
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Entry
HT578_21435 CDS
T07993
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr00061
Fatty acid biosynthesis
ndr00071
Fatty acid degradation
ndr01100
Metabolic pathways
ndr01212
Fatty acid metabolism
ndr02024
Quorum sensing
ndr04146
Peroxisome
Module
ndr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HT578_21435
00071 Fatty acid degradation
HT578_21435
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HT578_21435
09145 Cellular community - prokaryotes
02024 Quorum sensing
HT578_21435
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ndr01004
]
HT578_21435
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ndr04147
]
HT578_21435
Enzymes [BR:
ndr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HT578_21435
Lipid biosynthesis proteins [BR:
ndr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HT578_21435
Exosome [BR:
ndr04147
]
Exosomal proteins
Exosomal proteins of breast milk
HT578_21435
Exosomal proteins of breast cancer cells
HT578_21435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
bpX5
Motif
Other DBs
NCBI-ProteinID:
QVM86465
LinkDB
All DBs
Position
unnamed1:6437..8098
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AA seq
553 aa
AA seq
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MPQPAISAFPSIPEPAIPPRLLTDLLDNALNLYPERVAIDFLGRTWTYAQVGQLVRRAAR
GLQDQGLRKGDRFGLCLPNCPYFAILYFAALRVGAIVVNFNPLYTERELEHQIRDSGTRM
MAVPDVRIIHEKVQAVAPRAGLDKIVLCGMRDMLPWLQGLGFALFKRKDHARILDEGLHV
RLKALLAHDAEPDAVERHPDDVAVLQYTGGTTGVPKGAMLTHANLTANSAQMVVHVGGLR
PQQERTLGVLPMFHVFALTTVLNFSVEIGAEIVLLPRFEMKQVLNTMKRKPPTQFFGVPT
IYVALNALPDDEIPDLSAVRACISGGAPLPLEVREEFEARTRARVVEGYGLSETAPIIAC
NPLFGTVKDNSCGPSFPGTIIEIRDPENPSRVLPQGERGEVCARGPQVMKGYWQRPAETS
AVFVDGALRTGDIGYFDEDGYLFLVDRIKDIIFCGGYNVYPRIIEDAAYQHPAVKEAIAI
AIPDAYRGQSPKLFIALHEGSNLTVDELKVFLQDRLSKIEMPKAFAFRDSLPKTLIGKLS
KKDLIEEENKKLA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcccgccatcagcgccttcccgtcgataccggaaccggcaattccgccacgg
ctcctgaccgacctcctcgacaatgcgttgaacctttatcccgaacgcgtcgccatcgac
tttctcgggcgaacctggacttatgcgcaggtggggcaactcgttcgccgtgcagcacgt
ggattgcaggatcaggggctgcgcaagggcgatcggttcggcctgtgcctgccgaactgc
ccctatttcgcgatattgtacttcgcggcgctgcgcgtgggtgcgatcgtggtcaacttc
aacccgctctacacggagcgcgaactggagcatcagatccgggactcgggaacgcgcatg
atggcggtaccggacgtccggataatccacgagaaagtgcaagccgtcgcgccacgtgcc
gggctggacaagatcgtgttgtgcggcatgagggatatgctgccctggctgcaaggcctg
ggctttgcgctattcaagcgaaaagaccacgcgcggatactcgacgaaggccttcatgtc
cggctcaaggcgcttctcgcccatgatgccgaacctgacgcggtagaacgtcaccctgat
gatgtcgcggtccttcaatataccggaggcacaaccggcgtgcccaagggcgcaatgctg
acccacgccaacctcacggcgaacagcgcccagatggtggtgcatgtgggaggacttcgc
ccgcagcaggagagaactctcggcgtcctgcccatgtttcacgtcttcgcactcacgacg
gtgctcaacttctcagtcgaaatcggcgccgaaatcgtcctgctgccacggtttgagatg
aagcaggttctcaacacgatgaagcgcaagccgccgacacagttcttcggcgtgcctacg
atctatgttgccctgaacgcgcttccggacgacgagatacccgatctctcggccgtgcgc
gcctgtatatccggcggcgcaccgctcccgctcgaggtacgcgaggagttcgaggcacgc
acgcgtgccagggtcgtggaaggatatgggctctccgaaaccgccccgatcatcgcctgc
aacccgttgtttgggacggtgaaggacaatagctgcggcccaagtttccccggcaccatc
atcgagatccgagatccggagaatccctcgcgggttcttccccagggagaacgcggagaa
gtgtgcgcccgcggccctcaggtgatgaagggctattggcagcgccctgcagaaaccagt
gctgtcttcgtcgatggcgcgctacgaaccggcgatatcggctattttgatgaggatggc
tatctcttcctcgtcgaccgcatcaaggacatcatcttctgtggcggatataatgtatat
ccccggatcatcgaggatgcggcctaccagcacccggcggtaaaggaggcgatcgcaatc
gcgattcctgacgcctacagaggtcaatctcccaagttgttcatcgcgctgcacgaggga
tcgaacctgaccgtcgatgaactcaaggtctttttgcaggatcgcctcagcaagatcgag
atgcccaaggccttcgcattccgggacagcctgcccaagacgttgatcggcaaactttcg
aagaaggatttgatcgaggaggagaacaaaaagctcgcctga
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