Novosphingobium decolorationis: HT578_21605
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Entry
HT578_21605 CDS
T07993
Name
(GenBank) RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndr03021
]
HT578_21605
Transcription machinery [BR:
ndr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HT578_21605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_23
HTH_Tnp_ISL3
HTH_28
DUF134
GerE
Xre-like-HTH
HTH_17
HTH_1
HTH_30
HTH_10
HTH_AsnC-type
HTH_29
KORA
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
QVM86409
LinkDB
All DBs
Position
unnamed1:36132..36692
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AA seq
186 aa
AA seq
DB search
MVETGDSSESDLIAQVKSGGRRAFDRLVEPHAPRLLALARRMLASPSEAEEAVQNALASV
WINRQRLDEGRPVGGYLTTTTLNKCRDRLRRRKAASFLGFGRGLGEIIASDDSPGPEETA
LDRRELARVQSEIERLPVRLREALVLVAIDGRSQREAAELLGVSEKTVETRIYRARNRLR
ESLQYS
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtggtggagacaggggacagcagcgaatctgacctgattgctcaggtaaaatcaggcgga
cggcgggcgttcgatcggcttgtcgagcctcacgcgccgcgcctcctcgctctcgcccgg
cggatgctggcatcgccatcggaagccgaggaagccgtgcagaacgcgctggcctcggtc
tggataaatcgccagcgcctggacgaaggtcggccggtcggcggctatctcactacgacc
acgctgaacaagtgccgcgaccgcttgcggcggcgcaaggcggcgagctttcttggattc
ggtcgggggctgggagaaatcatcgcatctgacgactcgcccggccccgaagaaaccgcg
ctggatcgtcgagaactcgcccgtgtacagtccgaaatcgagcgcttgccggttcggctg
cgcgaagcgctggtgcttgttgccatcgatgggcgcagccagcgtgaggcggccgagttg
ctcggcgtgtcggaaaagaccgttgaaacccgcatataccgggcacgcaacaggctgcgc
gaaagtctgcaatattcctga
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