Natator depressus (flatback sea turtle): 141975065
Help
Entry
141975065 CDS
T11397
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds00310
Lysine degradation
nds00514
Other types of O-glycan biosynthesis
nds01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
141975065 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
141975065 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nds01003
]
141975065 (COLGALT1)
Enzymes [BR:
nds01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
141975065 (COLGALT1)
Glycosyltransferases [BR:
nds01003
]
O-Glycan biosynthesis
O-linked Gal type
141975065 (COLGALT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
141975065
NCBI-ProteinID:
XP_074791333
LinkDB
All DBs
Position
20:27509097..27527368
Genome browser
AA seq
607 aa
AA seq
DB search
MAPAAGLWRLLLLLLLAPGGAYFPEERWSPESPLQAPRVLIALLARNAAHALPAVLGALE
RLRHPKERTALWVATDHNTDNTTAVLREWLINVQTLYHYVEWRPMEEPRSYPDEEGLKHW
SNSRYEHVMKLRQAALKSARDMWADYILFVDADNLLTNPDTLGLLMAENKTVVAPMMDSR
AAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLIDLRKEASQDLAFYPP
HPDYTWSFDDIIVFAFACKQAEVQMFVCNKEVYGFLPVPLRAHSTMRDEVESFMHVQLEI
MVKNPPVEPSQYLSVLPKVPDKMSFDEVFMINLKRRADRRERMLRTLYEQQIDCKIIEAV
DGKAMNSSEVEAMGIQMLPGYKDPYHGRPLTKGELGCFLSHYKIWKEIVERGLEKSVVFE
DDLRFEIFFKRRLMNLMYDLEEEGLDWDLIYIGRKRMQVEHPEKSVPHVRNLVEADYSYW
TLAYVISLQGAQKLLGAEPLSKMLPVDEFLPVMFDKHPVSEYMEHFENRNLLAFSVEPLL
VYPTHYTGDDGYISDTETSVVWNNERVKTDWDRAKSQKMKEQQELSKEAKNSDVLQSPLD
STARDEL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggccccggccgccgggctctggcggctgctgctgctgctgctgctggccccgggcggc
gcctacttccccgaggagcggtggagcccggagtcgccgctgcaggcgccccgggtgctg
atcgcgctgctcgcccggaacgcggcgcacgcgctgccggcggtgctgggggccctggag
cggctgcggcacccgaaggagcgaacggcgctgtgggtggcaacagaccacaacactgac
aacacaacggctgtgctacgagaatggctgataaatgtgcagaccttgtatcactatgtg
gagtggaggccgatggaggagcccaggtcctatccggatgaggaaggcctgaagcactgg
tcaaattctcgctatgagcacgtgatgaagctcagacaagcagccttgaaatctgccagg
gacatgtgggctgactacatcttgtttgtggatgcagataatctcctgacaaacccagac
accctgggcctgctgatggcagagaacaagaccgtagtggcacccatgatggactctcgt
gctgcctattctaacttctggtgtggaatgacctcgcagggttattacaaacgcactcct
gcctacattcccattcgaaaacgagatcgccgtggctgctttgctgtccccatggtgcac
tccactttcctgattgacctgcggaaagaggcctcccaggaccttgccttctacccacca
cacccagattacacctggtcttttgatgacatcattgtgtttgcatttgcctgcaagcag
gcagaggtccagatgtttgtatgcaacaaagaggtttatggcttcctgccagtgccactg
agagcccacagcaccatgcgggatgaggtggaaagcttcatgcacgtgcagctggagatt
atggtgaagaaccctccggtggaaccttcacagtacctgtccgtcctgcccaaggtccct
gacaagatgagctttgatgaggttttcatgattaacttaaagcgcagggcagatcgacga
gagcgaatgctgcggacgctgtacgagcagcagatcgactgcaaaatcattgaggctgtg
gatggaaaagccatgaacagcagtgaggtggaagccatggggattcagatgctgccagga
tataaggatccataccacggccgtccactcaccaaaggggagctgggctgcttcctcagt
cactacaagatctggaaggagattgtggagagagggctggagaaatcagtcgtgttcgag
gatgacctgcggtttgaaatattctttaaacgacggctaatgaatctgatgtatgacctg
gaagaagagggtctggactgggacttgatttacattgggaggaagcgaatgcaggtggag
catccagagaagtctgtgcctcacgtgcggaacctggtggaggcagattattcctactgg
actctagcctatgtgatttcactgcagggtgcccagaagctgctgggggctgagccactc
tccaagatgttaccggtggatgaatttcttcctgtcatgtttgacaaacaccctgtctct
gaatacatggaacattttgaaaaccggaatttgctggccttttcagtggaaccactgctg
gtttacccaacacattacactggtgatgatggctacatcagcgacactgagacctctgtg
gtttggaataatgagagagtaaaaactgactgggaccgtgccaaatcccagaaaatgaaa
gaacagcaggagctcagcaaggaggccaagaactcagatgtgctccaatcacctcttgac
agtacagcccgggatgagctatga
DBGET
integrated database retrieval system
