KEGG   Natator depressus (flatback sea turtle): 141976125
Entry
141976125         CDS       T11397                                 
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
nds  Natator depressus (flatback sea turtle)
Pathway
nds04140  Autophagy - animal
nds04142  Lysosome biogenesis
nds04148  Efferocytosis
nds05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:nds00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    141976125 (VPS11)
   04140 Autophagy - animal
    141976125 (VPS11)
   04148 Efferocytosis
    141976125 (VPS11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    141976125 (VPS11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nds04131]
    141976125 (VPS11)
Membrane trafficking [BR:nds04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    141976125 (VPS11)
   Hops complex
    141976125 (VPS11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C VPS18_solenoid_2nd Clathrin zf-C3HC4_2 zf-RING_2 TPR_Vps41 zf-C3HC4 zf-rbx1 Beta-prop_WDR36-Utp21_1st TPR_GEMI5 zf-C3H2C3 zf-RING_5 Beta-prop_WDR3_1st zf-RING_UBOX Beta-prop_IFT122_1st Paralemmin zf-RING_11 zf-ANAPC11 zf_RING_Vps8_fungal zf-C3HC4_3 zf-RING-like DivIC DLP_helical CC_Bre1 IPGA1_CC
Other DBs
NCBI-GeneID: 141976125
NCBI-ProteinID: XP_074793054
LinkDB
Position
22:19431934..19456167
AA seq 932 aa
MAAYLQWRRFVFFDRETVKEPAGPDGGGAGGAKPFALPPGITVCDSGRGSLVFGDMEGQI
WFLPRSLQLSSFQAYKLRVTHLYQLKQHSILASVGEDEEGINPLVKVWNLEKRDGGNPLC
TRIFPAIPGNKPTVVSCITVHETLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYP
VTGLAFRQSGKITHLFVVTTENIQSYMLSVKDYSRLELDTHGCGLRCSTLSDPSQDLQFI
VAGNKCVYLYQPDERGPCFAFEGQKLIVHWYRGYLVIVSKDRKSSPKSEFAGSDPQNSDK
QILNVYDLCNKFIAYSSVFDDVVDVLAEWGSLYVLTRDGKIHALQERDTQTKLEMLFRKN
LFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFL
DAQRIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETA
IKVLRQAGYFSHAVYLAEKHAHHEWFLKIQLEDIKNYQEALQYIGKLPFDQAESNMKRYG
KILMHHVPSETTELLKILCTDYRPTGDREGSGMLEGKKANSEEFIPVFANNSRELKAFLE
HMTEVQSDSPQGVYDTLLELRLQNWAHEQDLQIKEKLHSEAITLLKSGRFRTVFHKALVL
CQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYRKVIEVCELYGDQETCLWEQALSYFAR
KEEDCKEYITAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSRQIEQD
EQRIQKYREETTRIRQEIEELKTSPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFES
YSESDSECPTCMPENRKVTDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNK
LTLITDLPPGKSATTIDAGLQRELLIHTKRST
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggctgcttacctgcagtggcgccgcttcgtgttctttgacagggagacggtgaaggag
ccggctgggcccgacgggggcggagccggcggagcgaagcccttcgcccttccgccgggc
atcaccgtctgcgactcgggcagaggcagcctggtttttggggatatggaaggtcagatc
tggttcttgccacgctcccttcagcttagcagtttccaggcttacaagctgagggtgact
cacctgtaccagctgaagcagcacagcatcttggcttctgttggtgaagatgaagaaggc
attaacccgctggttaaagtctggaacttagagaaacgagatggtgggaatcctctttgc
acaaggattttcccagcaataccgggtaacaaacctacagttgtgtcctgcataactgtc
catgagactcttaacttcatggctatcggctttgcagatggaagcgttgtgcttacaaaa
ggggacatcacacgagaccgacacagtaagacccagatcttacatgaaggcagttaccca
gtcactggccttgccttccgccagtctgggaaaatcacccacctttttgttgtcaccacg
gagaacatccagtcctatatgctgtcggtgaaagattattctcgtctggagctggacacg
catggttgcggtttacgctgctccacgctcagcgacccctcccaggacctccagttcatt
gtggcaggaaacaaatgtgtgtatctgtaccagccagatgagcgtggcccctgctttgcc
tttgagggacagaagttgatcgttcactggtatcggggatacctcgtcatcgtttccaag
gaccggaagagctctccaaaatcagagtttgctgggagcgacccgcagaactccgacaag
caaattttgaatgtctacgacctgtgtaacaagttcatcgcgtacagctcggtcttcgat
gacgtggtggatgtcttagccgagtgggggtctctctacgtgctgactagagatgggaag
atccatgcgcttcaggagagggatactcagaccaaacttgagatgctgttcagaaagaat
ctgtttgaaatggctattaacctggccaagagtcaccacttggatagcgatggcttatca
gagattttcaggcaatatggagatcatctatacaacaaagggaaccatgatggagccatt
cagcagtatatacgaaccattgggaagctagagccatcttatgtgatccggaagttctta
gatgctcagcgtatacacaacctgactgcgtacttgcagacactccacctgcagtccctt
gccaacgcagaccacaccaccctgctgctaaactgctacaccaaactcaaagacagctcc
aaactggaggagttcatcaagaccagtgagagtgaggtccactttgatgtggagacagca
atcaaggtgctccgtcaagcaggttacttttcccatgctgtgtacctggcagagaagcat
gcacaccatgaatggttcctcaaaatccagctggaggacatcaagaattaccaggaggca
ttgcagtacattggcaagctgccatttgaccaggcagaaagtaacatgaagcggtatggc
aaaatcctgatgcaccatgtccccagtgagaccacagaattgctgaagatcctatgcacg
gactaccggcccacaggagaccgtgaaggctctgggatgctggaggggaaaaaagctaat
tctgaagagttcattccagtctttgcaaacaactcccgggagctcaaggcttttctggag
cacatgacagaggtgcagtctgactctccccagggcgtctatgacacactgctggaactt
cgactccagaactgggcacatgaacaggatctgcagatcaaagagaagctgcacagcgaa
gccatcaccctgctgaagagtggaaggttcagaacagttttccataaggctttggtcctg
tgtcagatgcacaacttcaaggatggtgtcctctacctttatgaacagggcaaacttttt
caacagatcatgcattatcacatgcagaatgagcagtacaggaaggtgattgaggtgtgc
gagttgtatggagaccaagagacctgtctctgggaacaggccctcagctattttgcccgg
aaagaagaggactgcaaggaatacatcacagcagtactgaagcatattgaaaacaagaac
ctcatgcctccactgctcgttgtgcagactctggctcataactccacggccacgctgtct
gtgattaaagattatcttgtcaacaagctgcagaagcaaagccgccagattgagcaggat
gagcagaggattcagaaatatcgtgaagagaccacaaggatccgccaggagattgaagag
ctcaaaaccagtcccaagatcttccagaagacaaagtgcagcatctgtacaagtgccctg
gagctgccttcagtccacttcctgtgtggtcattcctttcaccagcactgctttgagagc
tactcagagagcgattcagaatgtcccacctgcatgccagagaaccgaaaggtcacagat
atgatccgagcccaagaacagaagagagatctgcatgatcagtttcagcatcagctcaag
tgctctaatgatggcttctctgttgttgctgattactttggtcgtggggttttcaacaag
ctcactctcattacggatctgcccccaggcaaatcagccacaactattgacgctggcctg
cagagggagctcctcatacacacaaaacgcagcacctag

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