Natator depressus (flatback sea turtle): 141976752
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Entry
141976752 CDS
T11397
Symbol
HDAC6
Name
(RefSeq) protein deacetylase HDAC6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
nds Natator depressus (flatback sea turtle)
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nds01009
]
141976752 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nds03019
]
141976752 (HDAC6)
04131 Membrane trafficking [BR:
nds04131
]
141976752 (HDAC6)
03036 Chromosome and associated proteins [BR:
nds03036
]
141976752 (HDAC6)
Enzymes [BR:
nds01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
141976752 (HDAC6)
Protein phosphatases and associated proteins [BR:
nds01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141976752 (HDAC6)
Messenger RNA biogenesis [BR:
nds03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
141976752 (HDAC6)
Membrane trafficking [BR:
nds04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
141976752 (HDAC6)
Chromosome and associated proteins [BR:
nds03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
141976752 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141976752
NCBI-ProteinID:
XP_074793990
LinkDB
All DBs
Position
23:complement(22843419..22857726)
Genome browser
AA seq
1028 aa
AA seq
DB search
MKRGGRKGPPPRRSPGLPETKRRGRAQRMNKEAEELESGLRRLDLSVPGAVPVGTGLAFD
ERLTDFHCLWDDSFPERPERLAAVKGKLLQCGLWERCVPVEARLATEEEILLAHSQEYVE
LMKSTEQMSEQELRALSETYDSVFLHPDSYRCARLAGGCVLRLLEKVQSGELRNGLALVR
PPGHHAHRDKMDGYCMFNHLAIGARYAQQKLGVERVLIVDWDVHHGQGTQFLFEEDPSVL
YFSVHRYEQGRFWPHLPASDSPAVGQGRGEGFNVNVPWNAVGMRDGDYLAAFLHVFLPVA
FEFQPQLVLVAAGFDSVLGDPKGEMAVSPACFAHLTHLLMALAGGKMLLSLEGGYNLNSL
AEGVCAALRTLLGDPCPRLEPPVAPCRSALSSVSGTLAIHEKYWRSLQRGETDTPPEDVD
EEPAPVEPPDPPEVPRPLPAARTGLVYDERMTEHYNMWDSQHPELPQRVSRIFQRHGELR
LTERCRRIPARSAEEEELRMCHSPAYVQTVKATASMKPRDLHRQGDRYNSIYICTSSYEC
ARLAAGSAFNAVQAVLEGEVQNAVAIVRPPGHHAESDTACGFCFFNSVALAARFAQRLAG
RPMRVMILDWDVHHGNGTQHMFEEDPSVLYVSLHRYDRGSFFPTSEDADADRVGVGPGRG
FTLNVPWNSPHMGDAEYLAAFHRLVLPVAYQFDPGLVLVSAGFDAARGDPLGGCLVSPEC
YAHMTHLLLGLAGGRVVLVLEGGYNLVSISESMTMCTRTLLGDPLPELGRLRAPHPSALQ
SLARASAVHRKYWTCLRLDVPIQEDSRPQSGQLGPIHEDSPPEAPSGGSQSPPVSEGSVD
DILRLGALCLSGEVGTDSGSPQLSPDSALVGGASPGEAEPPATEESEDPPSLLDEAAALL
PTPSVSLGVEFADTGSLYAVTPLPWCPHLDSLQPLPQAGLDVLAPCEECGSRGENWVCLA
CYQVLCGRYINQHMLAHGSLSGHPLVLSYADLSVWCYACQSYVHHPTLLPAKTLAHRMKF
GADPAAGL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggggtggccggaagggccccccgccccgtcgcagccctgggctccccgaaacc
aagcgccgcggccgagcccagaggatgaacaaagaggcggaggagctggaatcggggctg
cggcgcctggatctgagcgtgccgggggcggtgcccgtggggacgggtctggcctttgac
gagcggctcactgacttccactgcctgtgggatgacagcttccccgagcgcccggagaga
ctcgcggccgtcaagggaaagttgctgcaatgcggcctgtgggagcgctgtgtcccggtg
gaggcccggctggctaccgaggaagagattctgctagcccacagccaggagtacgtggag
ctgatgaagtcgaccgagcagatgagcgagcaggagctcagggccctgtcggagacctac
gactccgtcttcctgcacccggattcgtaccgttgcgcccggctggctggtggctgcgtt
ctgcggctgctggagaaggtgcagagcggggagctgcgcaacgggctggcgctggtccgg
ccgccaggacaccacgcccaccgagataagatggacggttactgcatgttcaaccacctg
gccatcggggctagatatgcccagcaaaaattgggagtggaacgagtcttgatcgtcgac
tgggacgttcaccacgggcagggcacccagttcctcttcgaggaggatcccagcgttctc
tatttctccgtccatcgctatgagcaggggaggttctggccccacctgccagcgtccgac
agccccgccgtggggcagggccgcggagaggggttcaacgtcaacgtgccgtggaacgcg
gtgggaatgagggatggtgattatctcgcggcatttttacacgtcttcctgccagtggcc
tttgagttccaaccccagctggttctggtggccgccgggttcgactctgtgctcggggac
cccaagggcgagatggctgtgtcgcccgcgtgcttcgctcacctgactcatctgctgatg
gccctggcgggcggcaagatgctactgtctttggagggtggctacaatctgaactccctg
gctgagggggtctgtgcggccctgaggaccctcttgggggacccctgtccccggctggag
ccgcccgttgccccctgtcgcagcgctctgagctccgtgtctgggacgctcgcgatccat
gagaaatactggcggagcctgcagagaggggagaccgacaccccccctgaggatgtggac
gaggagccagcccccgtggaacccccagaccctcctgaggtgccgcgacccctcccggct
gcccgcaccgggctggtgtatgacgaacgcatgacggagcattacaacatgtgggacagc
cagcacccagagctgccccagcgggtctcccgcatcttccagcgccacggggagctccgg
ctcacggaacgatgccgccggatcccggcccgcagcgctgaggaagaggagctgagaatg
tgccacagcccggcgtacgtgcagacggtgaaggccacggccagcatgaagccacgggac
ctgcaccgccagggggaccggtacaactccatctacatctgcaccagctcctacgagtgc
gcccggctggccgccggctcggccttcaacgccgtgcaggccgtgctggagggcgaggtg
cagaacgccgtggccattgtccggccccccgggcatcacgccgagtccgacacggcctgt
ggcttctgcttcttcaattcggtagccctggcagctcgtttcgctcagcgcctggcggga
cggcccatgagggtgatgatcctggactgggatgttcaccacggcaacggtacccagcac
atgtttgaagaagatccgagcgtgctgtacgtctctctgcaccgctacgaccgcggctcc
ttcttccccacctcggaggacgctgacgccgaccgggtgggggtggggccgggccgcggc
ttcaccctcaacgtgccctggaacagcccccacatgggcgacgccgagtacctggccgcc
ttccaccgtctggtgctgcccgttgcctaccagttcgacccggggctggttctggtgtcg
gctgggttcgatgctgcccgcggcgacccactggggggctgcctggtgagccccgagtgt
tacgcccacatgacccacctcctgctggggctggcggggggccgggtcgtgctggtactg
gagggaggctacaacctggtgtctatctccgaatccatgaccatgtgcacccggaccctg
ctgggggaccccctgcccgagctggggcgcctgcgagctccccaccccagcgccctgcag
tcgctggcccgggcgagtgccgtgcaccgcaaatactggacctgcctgcggctggatgtg
ccgatccaggaggactcgaggccccaatccgggcagctgggtcccatccatgaggactcc
ccaccagaggccccctcggggggctcccagagccccccagtctccgagggctccgtcgac
gacatcctgaggctcggagccctctgcctcagcggtgaggtggggaccgactcgggctcc
ccccagctgagccctgactccgccctggtgggcggggcttcccctggagaggcggaacct
ccagctacagaagagtcagaggacccccccagcctcctggacgaagcagccgccctgctc
cccaccccctctgtcagcctgggggtggagttcgcagacacggggtcgctctacgccgtg
acccctctgccctggtgcccccacctggactcgctccagccccttccccaggccgggctg
gacgtgctggcgccctgtgaggaatgcggcagccggggcgagaactgggtctgtctggcc
tgttaccaggtgctctgcgggcgttacatcaatcagcacatgctggctcatggctccctt
tccggccaccccctggtgctgagttacgccgacctgtcggtctggtgctacgcctgtcaa
tcatatgtccatcacccgaccctgctgccagccaagaccctggctcaccgcatgaagttt
ggggcggacccggccgctgggctctga
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integrated database retrieval system
