KEGG   Natator depressus (flatback sea turtle): 141977433
Entry
141977433         CDS       T11397                                 
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
nds  Natator depressus (flatback sea turtle)
Brite
KEGG Orthology (KO) [BR:nds00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nds04131]
    141977433 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nds04147]
    141977433 (COPA)
Membrane trafficking [BR:nds04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    141977433 (COPA)
Exosome [BR:nds04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   141977433 (COPA)
  Exosomal proteins of bladder cancer cells
   141977433 (COPA)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 141977433
NCBI-ProteinID: XP_074795010
LinkDB
Position
24:complement(3322967..3355678)
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCSQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTQASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAAIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVDAGEGFGDEAFGKGQEEGGGWEVEEDLDLPPELDVPAGLAG
GAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILGGSFETAMRLLHDQVGVTNFGPYKQLFL
QTYARGRTTYQALPCLPAMYGYPHRNWKDAGLKNALPVVGLKLNDLIQRLQVCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEQ
QKRTCEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVSQQ
TRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFRGQI
CRVTMVTEIGKDVIGLRISPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgctgactaagttcgagaccaagtcggcccgggtgaaagggctcagctttcacccgaag
cggccctggatcctaacgagtttgcacaatggagtgatccagctgtgggattaccggatg
tgcacccttattgacaaatttgatgagcatgatggaccagtccgaggtattgatttccac
aaacagcagccactgtttgtctctggaggtgatgactacaaaataaaggtctggaattac
aagctgcgccgctgtctcttcacgctgctcgggcacctggattacattcgcaccaccttc
ttccaccatgaatacccctggatcctgagtgcttctgatgatcagacaatccgggtttgg
aactggcagtccagaacctgtgtttgcgtgctgacaggacacaaccactatgtgatgtgc
tcccagttccatccctctgaggacctggtggtgtctgccagcttggatcagactgtgcgc
gtttgggatatttctggcctaaggaagaagaatctgtctcctggagctgtggagtcagat
gtcaggggaattactggagtggatttgttcgggacgacagatgcggtggtgaaacatgtt
cttgagggacacgatcgtggggtgaactgggctgccttccaccccacaatgcctctcatc
gtgtctggtgctgatgatcggcaggtgaagatctggaggatgaatgaatcaaaggcctgg
gaggttgacacctgccgtggacactacaacaatgtctcctgtgctgtctttcacccacgg
caggagctgatcctcagcaattcagaagataagagcatccgtgtctgggatatgtctaaa
cgcacgggcgtccagaccttccgccgagatcacgatcgcttttgggtgttggctgctcac
cccaacctcaatctctttgctgcaggccacgatggcggcatgatcgtgttcaagctggag
cgtgagcggcctgcctatgcggtgcatggcaacatgctgtattacgtgaaggaccgtttc
ctgcgccaactcgacttcaacagctccaaagacgttgctgtcatgcagctgagaagtggt
tccaagttcccagtgttcaacatgtcgtacaacccagctgagaatgctgtcctgctctgc
acgagagccagtaacctagagaacagcacctatgacctgtacaccatcccaaaggacgca
gactcccagaaccctgatgccccggaagggaagcgttcctctgggctgacagctgtgtgg
gtagctcgcaaccgctttgcagtcctggatcgcatgcattcgatcctaatcaagaacctg
aagaatgagattaccaagaaagtgcaggtcccgaactgtgatgagattttctacgctggc
actgggaacctgttactgagggatgcagactcgatcaccctctttgatgtgcaacagaaa
cgaacccaggcttccgttaagatctccaaggtgaagtatgtcatctggtcagctgacatg
tcccatgtggctctgctggctaagcatgccatcatgatctgcaaccggaagctagagtcc
ctatgtaacatccatgagaatatccgtgtcaagagcggtgcctgggatgagagtggtgtc
ttcatctacaccaccagcaaccacatcaaatacgctgtcaccacaggggatcacggaatc
atccgcactctggacctgcctatctatgtcacccgcgtgaaggggaacaacgtgtactgt
ctagacagggaatgccgacccagggtcctcaccatcgaccccacggagttcaagttcaag
ctggcgctgatcaataggaagtatgatgaggtgttgcacatggtgaggaacgccaagctg
gtgggccagtccatcatcgcctacctgcagaagaagggctaccccgaggtggcgctgcat
ttcgtaaaggatgagaagacccggttcagcctggcactggagtgtggcaatatcgagatc
gctctagaggcagccaaggctctggatgacaagaattgttgggagaagctgggggaggtg
gccttgctgcagggaaaccatcagatcgtggagatgtgctaccagcgcaccaagaacttc
gacaggctctccttcctgtacctcatcacgggcaacctggagaagctccgcaagatgatg
aaaatagctgagatccgtaaagacatgagtggccactatcagaatgccctgtacctcgga
gatgtagcagagagggtgaggatcctgaagaactgcgggcagaagtccctggcctatctc
accgctgcaacccatggcttggatgaagaagccgagagtctgaaggagacgtttgaccca
gaaaaggaaacgattccagacattgaccccaatgcaaagctgctccagccccctgctgcc
atcatgcctctggacactaactggccattgctcactgtctccaagggattctttgaagga
acaattgctagcaaaggcaaaggaggggcgttggctgctgatattgatattgacacggtt
ggcactgaaggctggggagaggatgctgagctgcagctggatgaagatggctttgtggat
gccggggaaggctttggagacgaagcctttggtaaaggacaggaggaaggaggcggatgg
gaagttgaagaggatttggaccttccccctgaactggatgtccctgctggcctggcagga
ggagctgaggatggattctttgtgccacccaccaagggcaccagcccagctcaggtctgg
tgtaacaattcccagctgcctgttgatcacatcctgggtggttcctttgagacagccatg
cggctcctccacgaccaggtgggagtgactaattttggcccctacaagcaactcttcctg
cagacctatgcccggggccgcaccacttaccaagcactgccctgcctccccgccatgtat
ggatacccacatcgcaactggaaggacgccgggttgaagaatgccctccctgtcgtcggc
ctgaagctcaacgacctgatccagcgcctgcaagtctgctaccagctcaccacagctggc
aagttcgaggaggcggtggagaagttccgctccatcctgctgagcgtgccgctgctcgtc
gtggataacaagcaggagatcgctgaggcccagcagctgattgccatctgccgagagtac
atcgtggggctgtcgatggagatcgagaggaagaagctccccaaagagaccctggagcag
cagaaacgcacctgcgagatggcagcctacttcacccactccaacctgcagcccgtccac
atgatccttgtgctgcgcaccgccctcaatctcttctttaagctcaaaaacttcaagaca
gctgccaccttcgctcgccggctcctggagctgggccccaagcccgaagtgtcgcagcag
acgcgcaagatcctgtccgcctgcgagaagaaccccaccgacacctaccagctcaactac
gacatgcacaaccccttcgacatctgcgccgcctcctaccggcccatctaccgcggcaag
ccggtggagaagtgcccgctcagcggtgcctgctactgccctgagttccgggggcagatc
tgccgagtcaccatggtgacagagatcggcaaagacgtcattgggctgcgaatcagccca
ctccagttccgctaa

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