Natator depressus (flatback sea turtle): 141978068
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Entry
141978068 CDS
T11397
Symbol
USP39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141978068 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nds03041
]
141978068 (USP39)
Spliceosome [BR:
nds03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
141978068 (USP39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
141978068
NCBI-ProteinID:
XP_074796014
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Position
26:15146380..15169105
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AA seq
582 aa
AA seq
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MRLLLHMRVGEGKGAGGLRARVRSSGWTRPGMSGRVKREREREARAPPRSSGRVKREPAA
SRGSSRGKREAEPERVRVKREPEDGPPRAKREREAEEEPESEPEPTVRYGRFDPEDRRSR
HCPYLDTINRSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQFSHHV
FLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPG
IVGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRK
LWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKT
IVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLQNDEYQETMVESTFMYLTLDLPTAPLYKD
EKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFF
VEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPTEGSYRIHVLHHGT
GKWYELQDLQVTDILPQMITLSEAYIQIWKRRDEDETNQQGA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgttgctgcatatgcgtgtgggggagggcaaaggcgccgggggcctgcgggcg
cgcgtgcgcagtagcggttggacgcggcccgggatgtccggccgggtgaagcgggagcgg
gagcgggaggcccgggcgcctccgcggagctcgggccgggtgaagcgggagccggcggcg
tcgcgcggctcctcccgagggaagcgcgaggcggagcccgagcgggtccgggtgaagcgt
gagcccgaggacgggccgccccgggccaagcgggagcgcgaggccgaggaggagccggag
tcggagccggagccgacagtgagatatggccgatttgaccccgaggaccggcgcagcaga
cactgcccatacctggacactattaacaggagtgttctggactttgactttgagaagctg
tgctccatctcactctcgcatataaatgtctatgcttgcctggtttgtgggaaatacttc
cagggccgtgggttgaagtctcatgcttacattcacagcgtgcagttcagccatcacgtc
tttctgaacctccacacgctcaagttctactgtttgccagacaactatgagatcattgac
tcctcgctggaggacatcacttatgtgttgaagcccactttcaccaagcagcaaattgcc
aatttggacaaacaagccaaactttcgcgggcatatgatggcaccacttacctgcctggc
attgtggggctgaacaacatcaaggccaatgactatgccaatgcagtactccaggccctg
tctaacgtcccacctctgcggaactacttcctggaggaggagaactacaagaacatcaag
cgcccgccaggggacatcatgttcctgctcgtccagaggtttggagagctgatgaggaag
ctgtggaacccccgaaatttcaaggctcacgtctctccccatgaaatgctgcaggccgtg
gtcctgtgcagtaagaagaccttccagattaccaagcaaggtgatggcgttgacttcctc
tcctggtttctaaatgccttgcactctgctcttggtgggacaaagaagaagaaaaagacc
atcgtgaccgacgtgttccaaggctccatgcggatctttaccaaaaagcttccacaccct
gacctgccagcagaggagaaggagcagctgctgcaaaatgacgagtaccaggagacaatg
gtggaatccaccttcatgtacctgaccctcgacctccccactgctccactgtacaaggac
gagaaggagcagctgatcatcccccaggtgccgctcttcaacatcctggccaagttcaat
ggcatcactgagaaggagtataaaacctacaaggagaatttcctcaagcgtttccagctg
accaagctgcctccctacctcatcttctgcatcaagaggttcaccaagaacaacttcttt
gtggagaagaaccccactatcgtcaactttcccatcacgaatgtggatctccgggagtac
ctgtccgaggaggtgcaggccgtgcacaagaacaccacctatgaccttatcgccaacatc
gtgcatgatgggaaacccaccgagggctcctacagaattcacgtgctgcatcatggcacg
ggcaagtggtatgagctgcaagacttacaggtgaccgatatcctgccccagatgataacg
ctctcagaggcctatatccagatctggaagaggcgggatgaggatgagaccaaccagcag
ggggcgtga
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