Natator depressus (flatback sea turtle): 141978705
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Entry
141978705 CDS
T11397
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
nds
Natator depressus (flatback sea turtle)
Pathway
nds03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141978705 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nds03041
]
141978705 (DDX42)
Enzymes [BR:
nds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141978705 (DDX42)
Spliceosome [BR:
nds03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
141978705 (DDX42)
Complex B
141978705 (DDX42)
Complex C
U2 SnRNP specific factors
141978705 (DDX42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF4238
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
141978705
NCBI-ProteinID:
XP_074797132
LinkDB
All DBs
Position
27:7806018..7840204
Genome browser
AA seq
941 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAIAPGKKEEPKLPSQSHSAFGTPGSSAAFGKSAPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFNSKSGDSDSEDDPLEAFM
AEVEDQAARDMKRLEEKDKERKNTKGIRDDIEEEDDQEAYFRYMAENPTAGVVPEEEEDN
LEYDSDGNPIAPSKKVIDPLPPIDHSEIEYPPFEKNFYEEHEEISSLTPQQIVELRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
VRSVASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILPS
GPSKWNWLTRHLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKV
ISDFKKKGIPILVATDVAARGLDIPSIKTVVNYDVARDIDTHTHRIGRTGRAGEKGIAYT
LLTPKDSNFAGDLVRNMEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSDGSDRGSSSNVMSNYEAYKPSTGAMGDRLSAMKAAFQSQYKSHFVAASLNNQ
KTGSSAAGASGWTSAGSLNSVPTNSAQQNAASPDSPIAAAAVKGIPGFTSAGNLSSVPAY
PGMGIQGYNSTSASINSREGGNGGGGGGGGGRERYSDNRSNRHNDSPARHGDGSGRHGDS
QRHGDGGGRHSDGYRQGDNRHGDSHRHGESRHSSGGSNSSRHGDGRNNGDGRNNGDGRNN
EGRNNESRINENKKDGSNRDSKTDGFAVPEPPKRKKSRWDS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaacaaaggtgggcctggcaccaaaagaggctttggttttggaggatttgcc
atagcccctggaaagaaagaggaaccaaaactcccttcacagtcccatagtgcttttgga
acacctggctcttcagctgcgtttgggaagtcagcaccgcctcagctcccttctttctat
aaaattggatcaaagcgagcaaactttgatgaggagaatgcatactttgaggatgaagag
gaagattccagcaatgttgatttgccatacattcctgcagagaattcccccactcgccag
cagtttaattccaaatcgggagactctgacagtgaagatgatcccttggaagcattcatg
gctgaagtggaggatcaagcagctcgagacatgaagagacttgaagagaaagacaaggaa
agaaagaatacaaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcgctacatggcagaaaatcctactgctggtgtggtcccagaagaggaagaggataac
ttggaatatgatagtgatgggaatccaattgcgccatccaaaaaagtcatagatcctctt
ccacctattgatcattcagagattgaataccctccgtttgagaagaacttctacgaggag
cacgaagaaatcagcagcctcaccccacagcaaatagtggaactacgacataaattgaat
ttacgggtctctggtgccgctccccccagacctggcagtagttttgctcattttggattt
gatgaacagcttatgcatcaaattcggaaatctgagtatacccagcccactcctatacaa
tgtcagggtgttccagttgcattaagtggcagagacatgattggcatagctaagactggc
agtgggaaaaccgcagccttcatctggccaatgttgatccacatcatggatcaaaaggag
ctggagccaggggatggtcccattgcagtgatcgtgtgcccaaccagagagctttgccaa
cagatccatgctgaatgtaaacgctttggtaaagcgtataacctgcgctcggtagccgtg
tatggaggaggaagtatgtgggaacaagccaaagctctgcaggaaggggcagagatagtc
gtctgcacaccaggtcgcttgattgatcatgtgaagaagaaagctaccaatcttcaaaga
gtctcctatcttgtgtttgatgaagcagacagaatgtttgacatgggttttgaataccaa
gtgagatcagttgccagccatgtgcgccctgacagacaaactctcttgttcagtgccact
tttcgtaaaaagattgagaagttggccagagatatcctgatcgacccgattcgagtggtg
cagggagacattggagaggcaaatgaagatgttacacaaattgtggagattctcccctct
ggtcctagcaagtggaactggctgaccaggcacctggtggagttcacttcttctgggagt
gttcttctctttgtcaccaagaaagcaaatgcagaggagctggccaataatcttaagcag
gaggatcataacctagggctgcttcatggtgacatggaccagagcgaaaggaataaagtc
atttcagactttaagaaaaaggggatcccaattctggttgctactgatgtggcagctcgt
ggtctggatattccttccattaagaccgtggtcaattacgatgtggcccgtgacatagac
acccacacgcacagaattggacgtacgggcagggctggagagaagggaatagcttacact
ttactgactcccaaggatagtaattttgctggtgatcttgtcagaaatatggaaggagcc
aatcagcatgtttcaaaagaactcttggaccttgcaatgcagaatgcctggttccggaaa
tcccgtttcaagggagggaaaggcaagaagctgaacatcggcggtggtggcttagggtac
cgcgagcggcctggcctgggttcagatggctctgaccgtgggagcagcagcaatgtgatg
agtaactatgaggcgtacaagccatccactggggcaatgggagacagattgtctgcaatg
aaagcagcgtttcagtcacaatacaagagccactttgttgctgccagcttaaacaaccag
aagactggtagctctgctgctggggccagtggatggaccagcgctgggagcttgaattca
gtaccaacaaattcagcacagcagaatgctgcaagtcctgacagtccgattgccgctgcc
gcagtaaagggaatcccaggctttaccagtgctgggaacctgagcagtgtgcctgcctat
ccagggatgggaattcagggatacaacagcacaagtgccagcatcaacagcagagaaggc
ggcaacggcggtgggggtggtggaggcggcggtagagaacgatacagtgacaacagaagc
aaccgccataatgacagtcctgcgcgccatggagatggtagtggtcgccatggtgacagt
cagcgccatggagatggtggtggtcgccacagcgatggctaccgccagggagacaaccgc
catggggacagccaccgccacggtgaaagccgccattctagtggtggaagcaacagtagc
cgacatggtgatggccgcaataatggtgatggccgcaataatggtgacggtaggaacaac
gagggtagaaacaacgagagcaggatcaatgagaacaagaaagatggcagcaaccgggac
agcaagacggatggttttgctgtccccgagcccccaaagcgcaagaagagccgatgggac
agttaa
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