Natator depressus (flatback sea turtle): 141980902
Help
Entry
141980902 CDS
T11397
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03013
Nucleocytoplasmic transport
nds03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141980902 (UPF2)
03015 mRNA surveillance pathway
141980902 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nds03019
]
141980902 (UPF2)
Messenger RNA biogenesis [BR:
nds03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
141980902 (UPF2)
mRNA cycle factors
P-body specific factors
141980902 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141980902
NCBI-ProteinID:
XP_074798726
LinkDB
All DBs
Position
1:333893757..334030272
Genome browser
AA seq
1319 aa
AA seq
DB search
MPAERKKSASMEEKESSLNNKEKDFSERRSVSSREKAKEEVKVGLKRETLKAPEDKKKKL
EEDKRKKEDKERKKKEEDKIKAEEEQKRKEDEEKKKFEEEEKKKQEEEVKRQQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRET
HAHVSVVISFCRHCGDDIAGLVPRKVKNAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQNKDSSKDESRDSKDAKDNKDVAGTEDLELDMENLDINDDNLELDCGDEAE
DLTKKLLDEQVCSGRREGADSTGAENSDGKQAERKQEDEEANTGSHLKLIVDAFLQQLPN
CVNRDLIDKAAMDFCMSMNTKANRRKLVRALFIVPRQRLDLLPFYARLVGTLHPCMSDVA
EDLCSMLKGDFRFHVRKKDQINIETKNKTVRFIGELAKFKMFSKNDTLHCLKMLLSDFSH
HHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNP
PPAEKTVRKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDSEVKDYVICCMINIW
NVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGE
LYNYRMVESAVIFRTLYSFTSFGVNPDGTASSLDPPEHLFRIRLVCTILDTCGQYFDRGS
SKRKLDCFLVYFQRYVWWKKNLEVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESV
RQVQDLEREFLIKLGIVNDKDSKDSITEGENLEEEEEEEEGGAETEEQSGNESEVNEPEE
EECSDNDDEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQAL
DKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGSGEGESESGDTMPFVMLTRK
GNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQ
RPAPANTNRERRPRYQHPKGAPNADLIFKTGGRSLSVSVEAVLKAKLSIVRHAKHKVTL
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagtcagccagtatggaagaaaaagaatcttcattaaataac
aaagaaaaagacttcagtgaaaggcgatcagtgagcagtagagagaaagcaaaggaggag
gtgaaggttggcctgaagagagagactctgaaggcacctgaagataaaaagaaaaaactg
gaggaggataaacggaaaaaagaagacaaggagcgaaagaaaaaagaagaggacaagata
aaagctgaagaagagcagaagaggaaagaggatgaagaaaaaaagaaatttgaagaggaa
gagaaaaagaaacaagaagaggaagtaaaacgtcagcaagaggaggcagctgcacaattg
aaagagaaagaggaagcacatcaactccatcaggaagcttgggagcgccatcaagcaaga
aaggaactccgcagcaaaaaccagaatgcaccagacaaccgccctgaggagaatttcttt
agcaggctggactcgagtctgaagaagaacactgcttttgttaagaagctaaaaactatc
acagaacaacagagggactccttgtctcatgattttaatagcctcaatttaagcaagtac
attgcagaagctgtagcttctattgttgaagcaaagctgaaaatatcagatgtgaactgt
gccgtgcacttgtgttctctctttcaccagcgctatgctgattttgctccatcgctactt
caggtttggaaaaagcattttgaagcaaggaaagaagagaaaactcccaacattaccaaa
ctaagaactgacttgcgtttcattgcagaattgacaatagttgggattttcactgataaa
gaaggtctgtctttaatctatgaacagctaaaaaacattattaatgctgatcgagagact
cacgctcatgtttctgtggtaataagcttttgccggcactgtggagatgatattgctggt
ttggtaccaaggaaggttaaaaatgctgcagaaaagtttaacttgagttttcctcctagt
gagataatcagcccagagaagcaacagcccttccagaatttgttgaaggaatactttaca
tctttgaccaaacacctgaaaagggaccacagagagctgcaaaatattgagagacaaaac
aggcgtattctgcactctaaaggagagttgagtgaagatcgacacaagcagtatgaagaa
tttgcaatgtcctatcagaagctgttggcaaattctcagtctctggctgatctgttggat
gaaaatatgccggatcttccccaagagaaaccaacaccagaggaacatgggcctggcatt
gacatttttacccctggcaaacctggagaatatgacctggaagggggcatctgggaagat
gaagatgctcgaaatttctatgagaaccttattgatctaaaagcttttgtgccagccatt
ttgtttaaagataatgaaaaatgttctcagaacaaggactccagcaaggatgagtctaga
gattcaaaagatgccaaggataataaggatgttgctggtactgaggatttggagttggat
atggagaatttggacattaatgatgataacttggagttagactgtggagatgaagcagaa
gatctcacaaaaaagcttcttgatgagcaagtatgctcaggcaggagagagggagcagat
agcaccggagctgaaaatagtgacggaaaacaagctgaaagaaaacaagaggatgaagaa
gccaatactgggtctcacttaaaactgatagtagatgctttccttcagcaactcccaaac
tgtgtcaacagagacctcatagacaaggcagcaatggatttttgcatgagtatgaacaca
aaagccaatagaagaaagttagtacgagctctcttcatagttcctagacaaaggttggat
ttgcttccattttatgcaaggctggttggcacattgcatccctgtatgtctgatgtagca
gaggatctttgttccatgctgaaaggggatttcagatttcatgtgagaaaaaaggaccag
atcaatattgaaacaaaaaataaaactgtgagatttattggagagcttgccaagtttaag
atgttctccaaaaatgacaccctgcattgtttaaagatgcttctgtcagacttttctcat
caccatattgaaatggcatgtactctgctggaaacgtgtggaagattcctatttagatca
ccagagtctcacttaagaacaagcgttcttttggaacaaatgatgagaaagaaacaagca
atgcatctcgacgcacggtatgtcacaatggtggagaatgcatactactactgtaatccc
cctcctgctgaaaaaactgtgaggaagaaacgcccacctctgcaggagtatattcgtaag
cttctttacaaggatctctccaaggtcaccactgagaaggtcctgagacagatgcgcaaa
ttgccctggcaggactctgaagtgaaagattatgttatatgttgtatgatcaacatttgg
aatgtgaaatacaatagtattcactgtgtagctaacctcttagcagggttggtgctttac
caagaggacgttggaattcatgtcgtggatggagtgctagaggatattcgcctaggcatg
gaggttaaccagccgaagtttaatcagcgacggatcagcagtgccaagttcttgggagaa
ctttacaattaccgaatggtagagtcagctgtaatatttcgaactctatattcatttaca
tcatttggtgtgaaccctgatggtactgctagttcactggaccctccagaacatcttttc
cgaattagactggtctgcaccatccttgatacctgtgggcaatattttgacagaggttcc
agcaaacggaagcttgattgctttcttgtgtactttcagaggtatgtttggtggaagaag
aatttggaagtttggacaaaagaccatccgtttcctattgacattgactatatgatcagt
gataccctagaactgctgagaccaaagataaaactctgcaattctctggaagaatccgtc
aggcaggtacaagacttggaacgagaattcttaataaaactaggcattgtgaatgacaaa
gattcaaaagattctataacggaaggagagaacctggaagaagaggaagaggaggaggaa
ggtggagcagagacagaagaacagtctggaaatgaaagtgaagtaaatgagccagaggaa
gaggagtgctcagacaatgacgatgaggagggtgaggaagaagaggaagagaatactgat
tacctcacagactccaataaggaaaatgaaactgatgaagagaacacagaagtaatgatt
aaaggaggaggacttaaacatgttccttgcgtagaggacgaggacttcattcaggcattg
gataaaatgatgctggagaatcttcagcaacggagtggagaatctgtgaaagttcatcag
ctggacgttgctattcctctgcatctcaagagtcagctaaagaagggtccacctttgggt
agtggggaaggagaatcagagtcgggagacacaatgccatttgtcatgttaactcgaaaa
ggcaacaaacagcagtttaagatcctaaatgtgccaatgtcttctcaacttgctgccaac
cactggaatcaacaacaagctgagcaagaggagagaatgagaatgaaaaagctcactctg
gatattaatgaacggcaagaacaagaggactatcaggagatgttacagtctctggcacag
cgtccagctccagcaaatactaatcgtgaaaggcggccacgttaccagcatccgaaggga
gcacctaatgcagatctaatctttaaaactggtgggagaagcctctctgtcagtgtggag
gctgtgctgaaggccaagctttccattgtaaggcatgcaaagcacaaggtgaccctatga
DBGET
integrated database retrieval system
