Natator depressus (flatback sea turtle): 141982906
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Entry
141982906 CDS
T11397
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03250
Viral life cycle - HIV-1
nds03272
Virion - Hepatitis viruses
nds04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
141982906 (PDCD6IP)
03272 Virion - Hepatitis viruses
141982906 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141982906 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nds04131
]
141982906 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nds04147
]
141982906 (PDCD6IP)
Membrane trafficking [BR:
nds04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
141982906 (PDCD6IP)
Exosome [BR:
nds04147
]
Exosomal proteins
Proteins found in most exosomes
141982906 (PDCD6IP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Snapin_Pallidin
Ly49
Motif
Other DBs
NCBI-GeneID:
141982906
NCBI-ProteinID:
XP_074801530
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Position
2:complement(181006221..181058215)
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AA seq
871 aa
AA seq
DB search
MATFISVQSKKASEVDLAKPLCKFIQQTYPAGDAQAEHCRAAEELNKLRKSAVGRPLDKH
ESSLETLMRYYDQLCSIEPKFPFSENQICVTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNCGALASQIASEQNLDNDEGLKTAAKHYQFASGAFQQIKDTVLSALNREPTVDISP
DTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYYGDAFKQCQYKDTLPKYF
YFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIGRLQHASDLVKTVASRYDEYIN
VKDLSDKINRALTAAKKDNDFIYHDRVPDLKDLDPIGKASLVKSTSVVVPISQKFTDLFE
KMVPLAVQQSLSLYNQRKADLVNRSIAQMREATNLANGVLASLNLPAAIEDVSGDSVPQS
ILQKSKSVVEQGGIQTIDQLIKDLPELLQRNREILDESLRLLGEEEATDNDLRTKFKERW
QRTPSSELYKPLRAEGANFSNILDKAIQADGHVKERYQTHRDTISLLCKPEPELNAAIPS
ANPAKTMQGSEVVSVLRSLLASLDEVKKEREQLENDLKSVNFDMTSKFLTALAQDGAINE
EAISVTELDRIYGSLTHKVQETLKKQDELLQDIQNAHQEFSKMKQSNSESNLREEVLKNL
AVANDNFVELVANLKEGTKFYNELTEILLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSVPSQPAYQTAAAGGSKPAASTTPTPAPRTMVSSKPQPPARPPPPAISTASTLSPP
VSTATGATASPVGSSVASTGPSQAQGPPYPTYPGYPGYCQMPMPMGYNPYTYGQYNLPYA
PQMYQNPGQVPYPGPQQPGYPYPQQPYYPQQ
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctttatctcggtgcagtcgaagaaggcctccgaggtggacttggccaagccg
ctctgcaagtttatccagcagacctacccggccggggacgcgcaggccgagcactgccgc
gcggccgaggagctcaataagctgcgcaagagcgcggtcggccgcccgctcgacaagcac
gagagctcgctcgagacgctgatgcgatactacgatcagctatgttccatagagccaaaa
tttccattttctgaaaatcagatctgtgtgacctttacatggaaagatgcctttgataaa
gggtcgctttttggaggttctgtcaaacttgctctggcaagtttgggatatgagaagact
tgcgttttattcaactgtggagcattagctagtcagattgcatcagagcagaatctggat
aatgatgaaggattgaaaactgctgctaaacattatcagtttgctagtggtgccttccaa
caaattaaagacacagtcttgtctgcattgaatagagagcctacagtggacatctctcca
gatacagttggaacccttagtcttattatgttggctcaagctcaagaggtttttttctta
aaagcaacaagagataaaatgaaagatgctatcatagctaaactggctaaccaagctgca
gattattatggtgatgctttcaaacagtgtcaatataaggacactttgcccaagtatttt
tatttccaggaggtgtttcctgttctggctgcaaagcactgcattatgcaggccaatgca
gagtatcaccagtctatcctggcaaagcagcagaagaaatttggtgaagaaattgggaga
ctacagcatgcatcagacttggtaaaaacagtggcatctcgttatgatgaatacataaac
gtaaaagatttgtctgacaaaatcaaccgcgctcttacagctgcgaagaaggacaatgac
ttcatttatcatgaccgggttcctgacttgaaagatctagatcccattggcaaagccagt
cttgtgaaatctacctcagttgttgtccctatcagccagaagttcactgatttgtttgag
aagatggttcctctggcagtgcagcagtctctgagcctctacaaccagagaaaggcagac
ttggtaaatagatccatagcccagatgagagaagccaccaatctggcaaatggagtattg
gcttctctcaatctgcctgctgccattgaagatgtgtctggtgatagtgttcctcagtct
attctgcagaagtctaagtctgttgttgaacagggaggcatccagaccattgatcagctg
atcaaagatctaccagaactgctacagagaaacagagagatcttagatgaatcactaaga
ttattgggtgaagaggaagccacagacaatgatctaagaacaaaattcaaagagcgttgg
caaagaacaccatccagtgaactctacaaacctttgagggcagagggagccaatttcagt
aatattttggataaagctatacaggcagatggacatgttaaagaacgctatcagactcat
cgggatacaatttcacttctttgtaaaccagagccagaattgaatgcagccattccttct
gccaatccagcaaaaacgatgcagggaagtgaggttgttagtgtcttaagatctctacta
gctagcctggatgaggtgaagaaggagagagaacaacttgagaatgacctaaaatctgta
aattttgacatgacaagcaaatttctgactgcacttgcacaggatggtgctataaatgag
gaagccatctctgtcaccgaattggaccggatatatggaagtttaacacacaaagtgcaa
gagaccctgaaaaagcaggatgaacttctccaagacattcagaatgcacatcaggaattt
tcaaagatgaaacaatcaaacagtgaatctaatttaagagaagaagttctgaagaattta
gctgtagcaaatgacaactttgtggaacttgtagctaatttaaaagaaggcacaaagttt
tacaatgaattgacagaaatcttgctgaaattccaaaacaaatgcagtgacatcgttttt
gcccgtaagactgaaagagatgaacttctaaaagacttacaacaaagcattgctagagaa
cccagtgctccctctgttccttcacagcctgcataccaaactgcagcagctggaggaagt
aaacctgctgcatcaactactccaactccagcacccagaaccatggtgtctagtaaacca
caaccaccagcacgccctccaccaccagcgatttctacagcaagtactctctcccctcct
gtatcaacagccactggagctactgcttctccagttggttcatctgtagctagcactgga
ccatcacaggcacagggacccccttacccaacctatccaggatacccagggtattgccag
atgccaatgccaatgggctacaatccttacacctatggccagtataatctgccatatgca
ccacaaatgtatcagaaccctggacaagtaccatacccaggacctcagcaacctggatac
ccttaccctcaacagccttattacccacagcaataa
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