Natator depressus (flatback sea turtle): 141983782
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Entry
141983782 CDS
T11397
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds04512
ECM-receptor interaction
nds04514
Cell adhesion molecule (CAM) interaction
nds04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141983782 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
141983782 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141983782 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nds04131
]
141983782 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nds04090
]
141983782 (SDC1)
00535 Proteoglycans [BR:
nds00535
]
141983782 (SDC1)
Membrane trafficking [BR:
nds04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
141983782 (SDC1)
CD molecules [BR:
nds04090
]
Proteins
141983782 (SDC1)
Proteoglycans [BR:
nds00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
141983782 (SDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
141983782
NCBI-ProteinID:
XP_074802896
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All DBs
Position
3:24008281..24041946
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AA seq
314 aa
AA seq
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MVNVSAVWLLALFLQAACSQTTNVNLPPEDLDSSGDDDDTFSGSGSGPLTNHSVAAWNIP
LEHANSSSRSTVSTGATVHQPAVNGTENPSEKEMVSTSPTSDVVPDEAVFSLKDETHELG
SAVEKPTTNEVVITTRSPTTHSLTVRVTTTQASSTVHVIEPSIHSSSSSGVSEETLDPSF
TTISEEDAHSPTTTILTRGIYPIDDRETPSPEESSGDQGDFIFSEERIIPSESELADSSR
DAEAAGTSQGLMDRKEVLGGVIAGGLVGLLFAVFLVGFMLYRMKKKDEGSYSLDEPKQSN
GGYQKPQKQEEFYA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggtaaacgtgtcagcagtgtggctgttagccctcttcttgcaggcagcgtgctcgcaa
actacaaatgtaaaccttcctcctgaagacctggactcatctggtgatgatgatgatact
ttctccggctctggttctggtcccttgaccaaccattctgtggctgcctggaatatcccc
ttagaacatgcaaattcttcatcaaggtcaacagtgtctactggagcaactgttcaccaa
cctgcagttaatggcacggaaaatccatctgaaaaagagatggtatcaacatcccccact
agtgatgtggtgccagatgaggctgtcttttcacttaaggatgaaactcacgaactgggc
tcagctgtagagaaacctacaacaaatgaggttgtcataacaacaagaagtccaactact
cacagtcttactgtcagagtaaccactacacaagcgtcaagcacagtccatgtaattgaa
cctagtatccatagctctagttcatctggtgtctctgaagaaacacttgatcccagcttc
accactattagtgaggaagatgctcactctccaactacaacaattctaaccaggggtata
taccctatagatgatagggaaactccatctcctgaagaaagctctggggatcagggagac
tttatctttagtgaagaacgaataataccatcagaatctgaactggctgactcttcaaga
gatgctgaagctgctggaacttcccaggggttaatggacaggaaagaagttctaggaggt
gtcattgctggaggactagtaggcctgctgtttgcagtattcctagtgggatttatgctg
tacagaatgaagaaaaaagatgaaggcagctattcattggatgaaccaaaacaatcaaat
ggaggataccaaaaaccacagaaacaagaagaattctatgcataa
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