KEGG   Natator depressus (flatback sea turtle): 141985223
Entry
141985223         CDS       T11397                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
nds  Natator depressus (flatback sea turtle)
Pathway
nds03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:nds00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    141985223 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nds03009]
    141985223 (WDR43)
Ribosome biogenesis [BR:nds03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    141985223 (WDR43)
SSDB
Motif
Pfam: Utp12 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_CDC20-Fz WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_EML EIF3I Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_C DSE1_N Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_ACSF4 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 Beta-prop_NOL10_N DUF6235 Beta-prop_RIG_1st Beta-prop_DCAF4 UTP15_C
Other DBs
NCBI-GeneID: 141985223
NCBI-ProteinID: XP_074805236
LinkDB
Position
3:155822899..155857367
AA seq 668 aa
MAAAGAACGGDAPRAPCAFSPRGRRSLALCGPDGRLRVWDTPSSRLQHEYVPSAHLSAAC
TCLAWAPPGGRQPPSKEGPQRKKRKSEAAEGGEQFDLLAIGTAVGSILLYSTVKGELQSK
LDGGHDNRINCVRWHQDNGCLYSCSEDKHIVEWNTQTCKVKCKWKGDNSSVSCLCISPDG
KMLLSAGRTIKLWDLETKEVYRNFTGHATAVSSLMFTTVRPPNESQPFDGITGLYFLSGA
ARDRLLSVWQIRSDRKDKNAVMSFTVTDEPVFIDLTVSESKEEPVKLAVVCRDGQLHLFE
HILNGYCKKPLTSNCTIQIATSGKDSDATPKPVPILAAAFCSDKQSLLLVYGNTLQPIIE
RMSLNSAESHVCLIRDVQKTMALQTEMSVTKVKTPIVNKEAKVLVPGIPGHSATIKSQSS
GMQKMESKRKPGDKEDSIEDRLGAMDIATVKIKTKGGLPQTDSFAVLLVQGLESNDPDIL
NKVLQTRKDALIKNTIAKIPVHAVIPLLHEITKRLQGHPYSACHMVRWLKSVFTIHASYL
STLPDLVPQLGMLYQLMESRVKTLQKLSRLHGKLYLIITQVAALEKIQDATDINQTAKLV
YEEESSEDGSEDEMIADKDSDENWDEDEEKGEHSDEEKGEHSDEREMAVEKEINRESDLD
PENESEEE
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggcggcggccggagcagcgtgtggcggggacgccccgcgggccccctgcgccttctcc
ccgcgcggccgccgctccctggcgctgtgcggccccgacgggcgcctgcgggtgtgggac
acgccgagcagccgcctgcagcacgagtacgtgccctccgcccacctcagcgccgcctgc
acctgcctggcctgggccccgccggggggccgccagcccccgagcaaggagggtcctcag
aggaaaaaacggaaatctgaagctgcagaaggaggtgaacagtttgacctgttggctatt
ggtacagcggttggcagtattttattatacagcacagttaaaggagaattacagagcaaa
ctagatggtggtcacgacaatagaataaactgtgtacggtggcaccaggacaatggttgt
ttatatagttgttcagaagacaaacacattgtggaatggaacacacagacctgcaaagtg
aagtgcaaatggaaaggtgacaacagcagcgttagctgcctgtgcatcagtccagatgga
aagatgttactttcagctggtcgaactatcaaattgtgggacctggagaccaaagaagtc
tacagaaatttcacaggccatgcaacagcagtttcatcactaatgttcaccacggtacga
ccgccgaatgaaagtcagccctttgatggaattacaggactctatttcttgtctggagca
gcacgtgaccggttactcagtgtatggcagatcagatcagataggaaagacaagaatgct
gtgatgtcttttactgttacagatgagccagtctttattgacctaacagtgtcagaaagc
aaagaggagccggtgaagttagcagttgtatgcagagatggacagttgcatttatttgaa
cacatcttaaatggatactgcaaaaagcccttaacatcaaattgtactatccagatagca
acgtctggaaaggacagtgatgccacaccaaaaccagtccctattctagcagctgcattt
tgctccgacaagcagtcgttactgcttgtgtatggaaacaccttacaacccatcattgag
agaatgtccttgaactccgctgaatctcacgtatgcttgataagggacgttcaaaagacc
atggcacttcaaacagaaatgtctgtaacaaaggtaaaaacgcccattgtgaacaaagaa
gccaaagttttagtgcctggaattcctggacatagtgcaaccatcaaatctcagtcctct
ggaatgcagaaaatggaaagcaaaagaaaacctggagataaagaggatagcattgaagac
cgtcttggtgcaatggatattgccactgtgaaaataaaaacaaaaggtggccttccacaa
actgacagctttgcagtgcttttggttcagggcttggaaagcaatgatcctgatatctta
aataaagtgcttcaaacaaggaaggacgctttaataaagaacacaatagctaaaatacct
gtacatgctgtcattccattgctgcatgagattacaaagaggttgcaaggccacccgtac
agtgcctgtcacatggtccggtggttaaagtctgttttcactatacatgcatcctacctt
tccacattgccagacctggttccccagttgggtatgctatatcagttaatggagagtaga
gtaaaaacattgcagaagctctctcgcctccatggaaaactctatcttatcatcacccag
gttgcagcactggaaaaaattcaggatgcaactgatattaatcagactgcaaaactagtg
tatgaggaagaatcctctgaggatggttctgaagatgagatgattgcagataaagattct
gatgagaactgggatgaagatgaagagaaaggggagcactcagatgaagagaaaggggag
cactcagatgaacgagaaatggctgttgaaaaagaaatcaatagggaatctgatttggac
ccagaaaatgaaagtgaagaagaataa

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