Natator depressus (flatback sea turtle): 141986540
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Entry
141986540 CDS
T11397
Name
(RefSeq) putative ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
nds Natator depressus (flatback sea turtle)
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nds03019
]
141986540
Enzymes [BR:
nds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141986540
Messenger RNA biogenesis [BR:
nds03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
141986540
BRITE hierarchy
Other DBs
NCBI-GeneID:
141986540
NCBI-ProteinID:
XP_074807216
LinkDB
All DBs
Position
4
AA seq
1776 aa
AA seq
DB search
MASGGTVQDGSDDDGGDLTAQNLEQKSVSFEDPVENKSGCSDFSNVFCWEQEIQQVSRAS
DYSRQDKYDFRNPELDKHIGLLEKISDLILNDIPKAEYVSLLNDYVESEFFLIDGDSLFI
TCISEQTLLPGQNLHFFYLVERFLLDLTNKGAKYIIVFFKDAEHAYYRHPTLLSLRTTLI
LHLQHNTDAVIHTEFSNFLEGKWQSFLQESYPYFIIISDDGLTKLQTSFLNLFIIHALSK
RINVVLTSGQESDFIRVYGYHIHGMYRHKEFFSQHREEILFVFQTLVKDLQESSTAALLS
LSGHSSVKDMEKEVCEILSQLKHVWPEISDIRHIVCIVTCALGLRTYSRLQKKHQATIRK
QEKSREITPEEAEDLIRMYCLSVVFLFHLPLSQRARVRLISYHWSKQAFTFIQMHKGCEF
FLLKHLTTEKLWKVDFTHLPDLSDDLLWKNVAYYYEVENEQGLNLDMGEKIKREYEYLWS
IISKLAGKDDDGKSLPLRRTSTSFLKKRASPTKESKNIPNLGLIPMTSMVVDEFAGDILS
SLPFLKSDDSAVTSLIKQKEFDEIRHWHSGKLLSDDYDRTKSSSQTMGKDPWALRSNQKL
QSFLRFYGSSLEGNISKTIVTQLDTPKKAYSDMKNSKKINKTKAEIIIEENRKRMKAEEE
RKEQKQWDALSIEKLIQENFNSGISKLEDFLKKCQSNSVKCTAEMAGLNTCFEVWIEQCK
DQGKKVKDINAAVEVMRRIHSLLEKYKDVMEKTDYQKIVRCLRYFGFDNLACTLDPSQIP
EDDRKEKKAKISKYAVGMGAARFQLQYMGHCLLREERTDRDPRIQHFIPDTWQRDLLDIV
DNNESAVIVAPTSSGKTYASYYCMEKILKESNEGVVVYVAPTKALVNQVWATVYNRFNKT
LPDGMVVCGVFTRDYRHDALNCQVLVTVPQCLEILLLSPHRQQWAKRIRYVIFDEVHCLG
GEIGAEVWEHLLVMIRCPFLALSATISNPKHLTEWLQSVKRYWQHVESVREESSGSSVTT
KKGTKKQKNIKTVNKSYKVKLVLYGERYNDLEKYVCSLEDNDFKIHHYHPCAALTVDHID
KYGFPSDLAFSPRESILLYDSMVQVWENWPRADELDPEKFTHFKNKIVITKADARKYEEE
LKEELKNWIVHDNRMKANRVLKLLKPHPTYCSEKNMENNFPCFVEKLRQMDKLPALFFLF
DIKKVETWAENIKNCLEKKQKSKQLPKTEKQIHLLTNRLKKMEKSMQKNQTVGMKITSSK
TDKMILEEAEHGNLMEKLGKITEIPPDCTYANSQAVDTEILQKVIHQVRFMTTNKTLKTL
ALRGIGYHHASVSQKGRQMVEMLFRMGFIQVVTATGTLALGINMPCKSVVFTQNSVYLDA
LNYRQMSGRAGRRGQDLLGSVFFYDIPLPKVDKLIKSNVPQLRGQFPLNISLALRLMLLA
AKADDKEDAKAKVLSVLKHSLLSFNQPRVVEILKLYFLFSLQFLVKEGYLDQEGNTMGFA
GLVSHLHYHEPSNLVLVSFLVKGLFHKLCQPMRKDSKTFSKEVMEQLVLVLANLFGRRYI
PASVIKSKQKFYQSKVFLEDLPEDFAVALHEYNNKIEENFGHFLFNISKMADMKEEYQLP
LSRTDFSGEECNDSKLVSHLMSCNEGRTAVSPFACLSGNMDSDLLHAETVNSVILRTVGI
TAGNIPVLCAKKFDNRRRMMPLNAYALDFYKHGSLKAMAQDNGIHEGAAYLLLKDFSLTI
KAISVSLSELCDDDEDNVVQAFHQLSDSYWEKLQKV
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggaggaactgttcaagatggcagtgatgatgatggtggagatctcacagcc
caaaaccttgaacaaaaatctgtgtcttttgaagatccagtagaaaataaaagtggctgc
agtgacttttcaaatgtgttttgctgggaacaggagatacagcaggtttcaagggccagt
gattatagcagacaagacaagtacgatttcagaaatccagaactagacaaacatatagga
cttctggagaaaatatctgacttaattttgaacgacataccaaaagctgagtatgtaagc
ttactcaatgattacgttgaatctgagttttttctgattgatggagattcattattcatc
acctgcataagtgaacaaacattactgccaggacagaatctgcacttcttttacctggta
gaacgctttctactggatttaacaaacaaaggagcaaaatacatcattgttttcttcaag
gatgcagagcatgcatattacaggcatccgactctcctgtccttacgtactacactgatt
ctccatcttcagcacaatactgatgctgtcattcacactgaattttccaactttttagaa
gggaagtggcaatctttcctgcaagaaagctacccatattttataataatctctgatgat
ggactgactaaactacagacaagctttctcaatttatttatcattcatgccttgtcaaaa
agaatcaatgttgtccttacttctggacaagaatcagattttatcagagtttatggatat
cacatccatggcatgtataggcacaaggaatttttctctcagcaccgagaagagattctg
tttgttttccaaacactggttaaagacttgcaggaatccagtacagcagcattactttct
ctctctggacattcaagtgtgaaggacatggaaaaagaggtttgtgagatattatcccag
ctcaagcatgtttggccagaaatatctgatattcgacacattgtctgcattgtcacatgt
gcactggggctgagaacgtacagtaggttacaaaagaaacaccaggctaccattcgaaaa
caggagaagagtagggaaataacaccagaagaagctgaagacctaatcaggatgtattgc
ctgagtgtggtttttcttttccatttacctctttcacaacgagctcgggttagattaatc
agttaccattggagtaaacaagctttcacatttatacaaatgcataaaggttgtgaattt
tttcttctgaaacacctgacaactgaaaagctgtggaaagtggatttcactcacttgcct
gatttaagtgatgatcttttgtggaagaatgttgcatattactatgaagtagaaaatgag
caaggattaaacttggatatgggggaaaaaattaagagagagtatgaatatctgtggagt
atcatatcaaaactagctggaaaggatgatgatggaaagtctttgcctctgaggagaact
tctacatcttttcttaaaaagagagcttcaccaactaaagaatccaagaatattcctaat
ctaggtctgatacccatgacatctatggttgtggatgaatttgctggagatattttaagt
agcctaccatttttaaaaagtgatgactctgctgttacttcacttattaaacaaaaagaa
tttgatgaaattcgacactggcattcaggaaagcttctcagtgatgattatgacagaaca
aagtccagttctcagacaatgggcaaagatccatgggcccttcgaagcaatcaaaagttg
cagtcttttctacgcttttatggatcatcactggaaggcaacatttcaaaaacaattgta
acccaattggatactccaaagaaggcttattctgacatgaagaacagcaaaaaaattaat
aagaccaaagcagaaataattattgaggaaaaccgaaagagaatgaaagctgaagaggaa
agaaaagaacagaaacaatgggatgctctttccattgaaaagctaatacaagagaatttt
aactctggaataagtaaactagaggattttctcaagaagtgtcaaagtaattctgtgaaa
tgtactgcagaaatggcaggactgaatacttgctttgaagtgtggatagaacaatgcaaa
gaccaaggaaagaaagtgaaagatataaatgcagctgttgaagtaatgagaagaatccat
tccttgctggaaaaatataaagatgtaatggagaagacagattatcaaaagattgtcaga
tgtcttagatactttggatttgacaatttagcatgtactttagatccttcccagattcca
gaggatgacagaaaagagaagaaggcaaagatttctaaatatgctgttggcatgggagca
gctcggtttcagctccagtacatgggtcattgcctgttacgagaagagagaacagatcga
gatcccaggatccagcattttattccagatacatggcagcgagaccttcttgacattgta
gataataatgaatctgcagtgattgtagcccctacctcatcagggaaaacgtacgcctcc
tactactgcatggagaaaatcctgaaagaaagtaacgagggggtggttgtgtatgttgct
ccaacaaaggctcttgttaaccaagtgtgggctactgtttataatcgatttaacaaaacg
ctgcctgatggcatggtagtatgtggtgttttcacgagagattaccgccatgatgctctg
aactgtcaggtactagtgacggtgcctcaatgcttagaaatcctgctgctgtcacctcac
cgccagcaatgggccaaaaggatcagatatgttatatttgatgaggtccattgtcttggt
ggtgaaattggagcagaagtttgggagcaccttctagttatgattcgatgtccatttttg
gctctctctgcaactattagtaaccccaaacatcttactgagtggctacagtcagtaaag
aggtactggcagcatgttgaaagtgtaagagaagaaagctctggttcttctgtaactacc
aagaaaggcactaaaaaacaaaagaatatcaagacagtaaataaatcatataaggttaaa
ttggtgctttatggagagagatacaatgatctggaaaaatatgtgtgttccctagaggac
aatgacttcaaaattcatcactatcacccatgtgctgccctaactgtggaccatatagat
aaatatggcttcccttcagacctggctttttctccacgagaaagtattttactgtatgac
tccatggtacaagtctgggaaaactggccaagagctgacgagctagatcctgagaagttt
acacattttaaaaataaaatagtaatcacaaaagcagatgcaagaaaatatgaagaagaa
ttgaaggaagagctaaaaaattggattgtacatgacaaccgaatgaaggctaacagggtg
ctgaagttactcaaaccccatcctacctattgttcagaaaaaaacatggagaacaatttc
ccatgttttgtggaaaaactaagacagatggataaactgcctgcattgttttttctattc
gacattaaaaaggtggaaacatgggctgaaaatataaaaaactgtctggagaagaagcaa
aagagtaaacaactaccaaagactgaaaagcaaatacatttgctaacaaacagattgaaa
aaaatggaaaagtccatgcagaagaatcagactgttggcatgaaaattacatcaagtaaa
actgataaaatgatacttgaggaggcagagcatggaaatttgatggaaaaacttgggaag
ataactgaaatacctccggattgcacctatgcaaatagccaagctgttgatacagagatt
ttgcagaaggtgattcatcaagtgaggttcatgacaacaaataaaacactgaaaacactg
gcactgagaggaattggatatcatcatgcttctgtgtcacaaaaaggaagacagatggtg
gagatgctcttcaggatgggatttatccaggtggttacagctactggaacactcgcttta
ggaatcaacatgccatgtaaatcggttgtcttcacacagaattctgtgtatttggatgct
ctgaactatagacagatgtccggacgagctggacgacgtggtcaagacttgctgggaagt
gtgtttttctatgacattccattgccaaaagtagacaagcttataaaatccaatgtacct
cagctgagaggccagttccctctgaatatttccctggcactgagacttatgctgttggct
gcaaaagctgatgacaaagaagatgcaaaagcaaaggtattgtcagtgttgaagcattcg
cttctctccttcaaccagccaagagtcgtggagatattaaagctctactttttattttct
ttgcaatttcttgtcaaggagggatatttggatcaagaaggcaacaccatgggatttgct
ggacttgtaagccatctgcattatcacgaaccttccaatcttgtcctagtcagctttctt
gtgaagggcttgttccacaaactgtgccagccaatgaggaaagactcaaagacattttct
aaagaggtgatggaacagctagtgctagtactggcaaatctgtttggaagaagatatatc
cctgccagcgttattaaatctaaacagaagttttaccagtcaaaggtgttccttgaagat
ctcccagaagactttgctgttgcattacatgagtacaacaacaaaatagaggagaatttt
ggccattttttatttaatatttccaagatggctgatatgaaagaagaataccaacttcct
ctttcaaggactgatttctcaggtgaagaatgcaatgactctaaactggtgtctcacttg
atgagttgtaatgagggaagaacagctgtttcaccttttgcatgcctgtctggaaacatg
gatagtgatttacttcatgcagagactgtcaacagtgtcatattacgcacagttggtatt
actgctggaaatattcctgtactttgtgcaaagaaatttgataatcgaagaagaatgatg
ccacttaatgcttatgcacttgacttctataaacatggttctttgaaagcaatggcacaa
gataatggtatccatgaaggagcagcttatcttctgctgaaagatttttcactcactatt
aaagctatcagcgtttctctaagtgaactctgtgatgatgatgaggacaatgttgtgcag
gcatttcaccaactcagtgacagttactgggaaaaactgcaaaaagtctaa
DBGET
integrated database retrieval system
