Natator depressus (flatback sea turtle): 141987425
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Entry
141987425 CDS
T11397
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141987425 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nds03019
]
141987425 (TNPO1)
03009 Ribosome biogenesis [BR:
nds03009
]
141987425 (TNPO1)
Messenger RNA biogenesis [BR:
nds03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
141987425 (TNPO1)
Ribosome biogenesis [BR:
nds03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
141987425 (TNPO1)
Pre-60S particles
141987425 (TNPO1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
IBN_N
TOR1L1_N
Vac14_Fab1_bd
HEAT_EF3_N
TPR_IPO5
Cnd1
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
HEAT_GCN1_C
INTS7_N
HEAT_GCN1_C_2
Dopey_N
CandA_N
RTP1_C1
ARM_TBCD
TPR_TTI1_C
PIK3R4-like_middle
DUF3689
Motif
Other DBs
NCBI-GeneID:
141987425
NCBI-ProteinID:
XP_074808853
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Position
5:complement(48869794..49039966)
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AA seq
896 aa
AA seq
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MVWRPKMEYEWKPDEQGLQQILQLLKESQSPDTTTQRAVQQKLEQLNQYPDFNNYLIFVL
TKLKSEDEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNIGDSSPLIRATVGILI
TTIASKGELQNWPELLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNI
MIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKN
VCRALVMLLEVRMDRLLPHMISIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLC
RHLTKLIPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQQHEEDGI
EEDDDDDDELDDDDTISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVVK
ESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPP
DTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQ
HKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVA
TALQSGFLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKDFMIVALDLLSGLAEG
LGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILG
TNLNPEFISVCNNATWAIGEISIQMGIDMQPYIPMVLHQLVEIINRPNTPKTLLENTAIT
IGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMITVNPSGVVQDFIF
FCDAVASWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAYYGV
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggcgacccaaaatggagtatgagtggaaacccgacgagcaggggctccagcag
atcctgcagctgctcaaggagtcgcagtccccggacaccaccacgcagagagcggtgcaa
caaaaactggaacaactgaatcagtatccagattttaacaactacctgatatttgttctt
acgaaattaaagtctgaagatgaacccacacggtccctgagtggtctcatattgaagaat
aatgtgaaagcgcattttcacaactttccaaatggagtaacggacttcatcaagagtgaa
tgtctaaacaacattggtgactcctccccattaattagagcaactgtaggcattctgatt
acaaccattgcctctaagggggaattgcagaattggcctgaactcttaccaaagctttgc
agcctcttggattctgaagactacaatacctgtgagggtgcatttggagctcttcagaag
atatgtgaagattctgctgaaatcttagatagtgatgtattagatcgacccctcaatatc
atgatccctaaatttttacagttcttcaaacacagcagtccaaaaataaggtcccatgct
gttgcatgcgtcaatcagtttatcatcagtagaactcaagctcttatgttgcacattgat
tcttttattgagaatctctttgcattggctggagatgaggagcctgaagtacgcaaaaat
gtgtgtcgggctttggtgatgctgctggaagttcgaatggatcgcctgcttcctcatatg
attagtatagttgagtacatgcttcagaggactcaggaccaagatgaaaatgtggctttg
gaggcgtgcgagttttggctgactttggctgagcagccaatttgtaaagatgtgctatgt
cggcatcttactaagttgatacctgtgttagtaaatggtatgaagtactcagaaatagat
attattctgctgaagggggatgttgaagaagatgaagctattccagatagtgaacaggac
ataaggcctcgttttcatcgttcacggacagtggctcagcagcatgaagaagatggtatt
gaggaagatgacgacgatgatgatgagcttgatgatgatgatactatttctgactggaat
ttaaggaagtgttctgctgctgcactagatgtccttgccaatgtatttcgtgatgaactt
ctgccacacattttgccccttttgaaagaactgctgtttcatccagaatgggtggttaaa
gaatcaggtatcctggttctaggagcaattgctgaaggttgcatgcagggtatgattcca
tatcttcctgaactaatccctcaccttattcagtgcctctctgataaaaaggctcttgtg
cgctccattacatgctggactcttagccgctatgcacactgggtagttagtcaaccccca
gatacgtacttgaagccattaatgacagagttgctaaaacgtatcctcgatagcaacaag
agagtacaagaagctgcctgcagtgcctttgctactctagaagaggaggcttgtacagag
cttgttccttaccttgcatatatacttgacactctggtcttcgcatttagtaaataccag
cataagaatcttctcatcctttatgatgccataggaactttagcagattctgtaggacat
catctaaacaaaccagaatatattcagatgctaatgcctccactaatccagaaatggaac
atgttgaaggatgaggataaagatctcttccctttgttagagtgcctgtcttcggttgcc
actgccttgcaatctggcttccttccatactgtgaacctgtgtatcagcgttgtgtaaac
ctggtacagaagactcttgcacaagccatgttgcacaatgctcagccagaccaatacgag
gcaccagataaagacttcatgattgtggctcttgatttactcagtggcttagctgaagga
cttggaggcaacattgaacagctagtggctcgcagtaatatcttgacactaatgtaccag
tgcatgcaggataaaatgcctgaggtacgacagagttcttttgccttgttaggtgacctg
acaaaggcatgctttcagcatgttaaaccttgcatagctgatttcatgccgattttggga
accaacctaaatcctgagttcatttctgtgtgcaacaatgctacatgggcaattggagaa
atctccattcaaatgggtatagacatgcagccttatattcctatggtgttgcaccagctt
gtagaaatcattaacagacccaacacaccaaagacgttgttagagaacacagcaataaca
attggtcgtcttggttacgtttgtcctcaagaggtggcccccatgctacagcagtttata
agaccctggtgtacctctctgcggaacataagggacaatgaggaaaaggattctgctttc
cgtgggatttgtaccatgatcacagtcaaccctagtggagtagtccaagactttatattt
ttttgtgatgctgttgcatcgtggattagtccaaaagatgatctccgagacatgttctgt
aagatccttcatggatttaaaaatcaagttggggatgaaaattggaggcgtttctctgac
cagtttcctcttcccttaaaagagcgccttgcagcttactatggagtttaa
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