Natator depressus (flatback sea turtle): 141988697
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Entry
141988697 CDS
T11397
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141988697 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nds03019
]
141988697 (PATL1)
Messenger RNA biogenesis [BR:
nds03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141988697 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
141988697 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
141988697
NCBI-ProteinID:
XP_074810699
LinkDB
All DBs
Position
6:complement(15237645..15257797)
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AA seq
770 aa
AA seq
DB search
MFRYQSLEECPLDEDEDAFQTLGEEDEDIDQFNDDTFGAGAIDDDWQEAHERLAELEDKP
ATARELEDGAVSDEMDLLGHHEENLAERLSKLVIENELEDPAIMQAVQTQPSMQQPGGLN
SSIWDGSAVLRRIRGPLLTQEVPSVSVLEYALPQRPPQGQEDERDLSERALPRRSSSPVI
GSPPVRAVPIGTPPKQATVPNFNQQILCPKPVHIRAPMQQRYPSPYSERMSPNQLCSVPN
SSLLGHPFPPSVTPVFTHLQRAQLLGGAQAGRMSPSQFARVSGLVGSPLTSMNPKLLQGR
VGQMMSPASGFRAFFGAPPPPAPPPSQQQQHLPCPGSHLQNLRPHPQMFRPDTTHLHPQH
RRLLHQRQQQNRNQHRSLNGSAGDRVGHRSSHQEQLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFQKLEKVSAAEEMHGDGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRQTLVTIEKTYSLLLDVEDYE
RRYLLSLEGERPALMEERKQKICDMYDNLRGKMPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMATARNLPFLIKKDAQDEVLLCLLRPFSLILYHLPSGTVTSLLQQLA
NLPQSATAPAPANLHLAAVLQNKFGLSLLYLVLSRGEELQNSSAATELMQDNQWTELMFM
ATRELLRIPEAALAKPVSTPSNLLSLFSRYVDQQKLNVLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctaccagtccctggaggagtgtcctctggatgaagatgaagatgcctttcag
accctgggcgaggaggatgaagatatcgaccagttcaatgatgacacgtttggagccggt
gctattgatgacgactggcaggaggcacatgagcggctcgcagaactggaagacaagcct
gcgacagctagagagctggaagatggggcggtcagtgatgagatggacctgctggggcac
catgaggagaacctggctgagaggctgagcaagctggtcatcgagaacgagctggaagat
ccagccatcatgcaggctgtgcaaacccagccttcaatgcagcagccaggaggcctcaac
tccagcatctgggatggatctgcagttctgaggcgcatccgaggaccgcttctcactcag
gaggtgccctcggtgtctgtgctggaatatgctctgcctcagagaccaccacagggccag
gaggatgagcgggacctctcggagcgggcactgcccaggcgctcgtcctccccagtcatt
gggagcccccctgtcagggctgtccccatcggcaccccaccaaagcaggccaccgtgccc
aacttcaaccagcagatcctgtgtccgaagcctgttcacatccgggccccgatgcaacag
cgttatccttccccctacagcgagaggatgtccccaaaccagctctgcagtgtcccgaat
tcctccctgctgggccacccgttccctcccagtgtcactcccgttttcacccaccttcag
agagcgcagcttctaggaggagcacaggctggacgaatgtctcccagccagtttgctcgt
gtctctggactcgttggcagccccctcacatccatgaaccccaagttgcttcaaggcaga
gttgggcagatgatgtctccagccagtgggttccgtgccttttttggagcgccaccgcct
cccgcgccaccgccatcccagcagcagcagcacctcccatgtcctgggtcccacttgcag
aacctaaggcctcaccctcagatgttcagaccagatacaactcaccttcacccgcagcat
cggcggctcttacatcagagacagcagcagaacaggaaccagcaccgtagtctgaatggc
tcggcgggggaccgagtgggccaccggagcagccatcaggagcagctgcggaaggacccc
tatgctaatctcatgttgcagcgggaaaaggactgggtatcaaagatccagatgatgcag
ttgcaaagcactgacccttacctggatgacttctactatcagaattacttccagaagctg
gagaaagtgtcagcggcagaggagatgcacggcgatggccccaagaaagaacgtactaaa
ctcatcacaccccaggtggccaagttagagcatgcctacaagccagtgcagtttgagggc
tcgctggggaagctcacagtctccagtgtaaataacccccggaaaatgattgacgcggtg
gtgacctcccgcagtgaggacgatgagacgaaggagaagcaggttcgagacaagagacgt
cagaccctcgtcaccattgagaagacatacagcctcctcctggatgtggaagactatgag
aggcgctacctcctgagcctggagggggagcggccagccctgatggaggagagaaagcag
aagatctgtgacatgtatgacaatctgagggggaaaatgcccggccaagagaggccgagt
gacgaccactttgtgcaaatcatgtgtatccggaaagggaagcgtatggttgcccggatc
ctgccctttctgtccacggagcaagcggccgacatactcatggcaacagccagaaacctg
cccttcctgatcaagaaggatgctcaggatgaggtgctgctgtgcctgttgaggccattc
tctctcattctctatcatcttccgtcagggacggtcaccagccttctgcagcagctagcg
aacctacctcagagcgccacggcgccagcacctgccaacctgcacctcgcagctgtgctc
cagaacaagtttggcctgtccctgctgtacttggtcctgagtcgtggggaggaattgcag
aattccagtgctgctacggagctaatgcaggacaaccagtggacggagctgatgttcatg
gcaacccgagagcttctgcggatccctgaagcagcgctggcaaagccagtatccaccccc
tctaacctgctgtcccttttttctcgctatgttgatcagcagaagctgaacgtgctggag
acaaagttgcagttagtgcaggggatacggtag
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integrated database retrieval system
