Natator depressus (flatback sea turtle): 141989014
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Entry
141989014 CDS
T11397
Symbol
PPFIA1
Name
(RefSeq) liprin-alpha-1 isoform X1
KO
K26226
liprin-alpha
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
141989014 (PPFIA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nds04131
]
141989014 (PPFIA1)
Membrane trafficking [BR:
nds04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
141989014 (PPFIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
141989014
NCBI-ProteinID:
XP_074811320
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All DBs
Position
6:49339082..49428703
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AA seq
1273 aa
AA seq
DB search
MMCEVMPTISEAEIPSGGNGGHSSGSPLQSDADSHFEQLMVSMLEERDRLLDTLRETQET
LVLTQGKLHEVSHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGTTHKELMILKEQNNQKRTLTDGVLDINHDQENTPSTNGKRSSD
GSSSHDEDLAKVIELQEIIDKQTNEQGQMKERLTALSSRVTELEEDLDTARKDLIKSEEM
NTKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSMHRQS
EDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKSDPLSSGNSAAKEAKL
LELASKFRKAEERHGNIEERLRQMEAQLEEKNQELQRARHREKMNEEHNKRLSDTVDKLL
SESNERLQLHLKERMAALEDKNSLLREVENAKKQVEDLQHEKDQLVLNIEAMRAENDQMR
IRATSLHHSRPHLGSVPDFRYPMTPLSVADSHTDPYSTSSVLRRPQKGRLAALRDEPSKV
QTLNEQDWERAQQASVLANVAQAFESDVDVSDGEDDRETIFSSVDLLSPSGQADAQTLAM
MLQEQLDAINKEIRLIQEEKENTEQRAEEIESRVGSGSLDNNGRFRSMNSIPLPFIGGSL
AGSSPPGSGRSTPRRIPHSPAREVDRLGIMTLPSDLRKHRRKSPVSGEEVRDDKTTIKCE
TSPPSSPRSLHLDRVHKGALHTLSHEDIRDIRNSTGSQDGQVSNPSSSNSSQDSLHKAPK
KKGIKSSIGRLFGKKEKGRPGQTNKESLGQVGLAETDNSSQDALGLSKLGGQAEKNRKLQ
KKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEI
QREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTTGNVWVTHEEMENLTATPQTEDE
EGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMV
DSFHRNSFQCGIMCLRKLNYDRKELERRREESQNEIKDVLVWSNDRMIRWVLSIGLKEYA
NNLIESGVHGALVALEETFDFNAFALLLQIPTQNTQGRAVLEREFNNLLVMGTDRRFDED
DDKSFRRAPSWRKKFRPKDIKGLAAGSAETLPANFRVTASMSSPSMQPKKMQIDGNVSGT
QRLDSTTVRTYSC
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaggtgatgccaaccatcagcgaggcagagattccctcagggggaaatgga
ggccatagttcaggctctcctttacagtcggatgctgattcccattttgagcagttaatg
gtatccatgttggaggaaagggatcgacttctggacacactaagagagactcaagaaaca
ctagtattgacccagggcaagctacatgaagtcagtcatgaaagagattccttgcagaga
cagctcaatactgcacttccacaggagtttgcagcacttactaaagagcttaatgtatgc
agggaacagctccttgaaagggaagaagaaattgctgaactgaaagcagaaagaaataat
acaaggctgcttttagaacatttggaatgtctagtctccagacatgagcgatcccttaga
atgactgttgtaaagagacaggctcagtctccagcaggagtttctagtgaagttgaagtt
ctcaaagcactaaaatcactatttgaacatcacaaagcccttgatgaaaaggtaagggaa
agattacgagtagcacttgaaagatgtagtttattggaagaagaactaggtactacgcat
aaagagttaatgattctgaaagagcaaaacaatcagaaaagaacactaactgatggggtg
ctggatataaatcatgatcaggaaaatacaccaagcacaaatgggaagagatcttctgat
ggttcttcaagccacgatgaagaccttgctaaagttatagaactccaagaaattatagac
aagcagaccaacgagcaaggccaaatgaaggaacgtctcactgctctttctagcagagtg
acagagctggaagaagatcttgacacagctagaaaagatttaataaaatcagaagaaatg
aatacaaagttgcaaagagatgtacgagaggccatggcccaaaaggaagacatggaagaa
agaattacaactcttgaaaaacgctacctcgctgcacagcgtgaagctacatctgtgcat
gacctcaatgataaacttgaaaatgaaattgctaataaagactccatgcaccgacagagt
gaagataagaacagacagttgcaagaacgactggaactggctgagcaaaagttgcagcag
actttgagaaaagctgagactttgcctgaggtggaggctgaactggcacagagagttgca
gcactttcaaagtctgaccctttgtcttctgggaactctgctgctaaagaggctaaactg
ttggaacttgcctccaagtttaggaaggctgaggagagacatggcaacattgaagaacgg
ttacgacagatggaagcacaattggaggaaaagaatcaggaattgcaaagggctagacac
agagagaagatgaatgaagaacataataaacgtttatcagatactgttgataaacttctg
tctgaatccaatgaaagacttcagcttcatctcaaggaaaggatggctgctctggaagat
aagaactctcttcttcgagaagttgaaaatgcaaagaagcaagtagaggatcttcaacat
gaaaaggatcaactggtactaaatatagaagcaatgagggctgaaaatgaccaaatgagg
atcagagccacttctcttcatcatagccgaccacatttgggtagtgtaccagatttcaga
tatccgatgacaccattatctgtggctgacagtcatacggatccctatagcacctcatca
gtgttaagacggccccagaaagggcgtttggcagctctacgtgatgaaccttcaaaggtt
caaacccttaatgaacaggattgggaacgtgcacaacaagcaagtgtgttggcaaatgta
gcacaagcatttgagagtgatgttgatgtctcggatggtgaagatgacagagagactata
ttcagttcagtcgatcttttgtcacctagtggtcaggctgacgctcagactttagccatg
atgcttcaagagcaattggatgcaattaacaaagagattagattgatacaagaagaaaag
gaaaatacggagcagcgagcagaggaaattgaaagtcgagttggtagcgggagtctagat
aacaatggacgatttcggtcaatgaactctattccccttccttttattggtgggtccctc
gctggttcctctcctcctggcagtggccgttccacaccaaggcggattccacatagtcca
gctcgggaagtggacagactaggtatcatgacactacctagtgatttaaggaaacaccgt
agaaagtctccagtttctggagaagaagtacgagatgacaagaccacaataaaatgtgag
acatcaccaccatcttcgcctcgatctctgcatttggatagagtccataaaggagctttg
catacactgagccacgaagacatcagggacataagaaattctacaggttctcaagatggg
caagtaagcaaccccagtagcagtaatagtagccaggattcccttcacaaagcccctaaa
aagaaggggatcaaatcttccataggtcgcttgtttggtaagaaagaaaagggtcgacct
ggacaaaccaacaaagaatcattgggacaagttggcttggcagaaacagacaattcttct
caagatgccttaggactcagcaaacttgggggacaggcagaaaaaaatagaaaactacag
aaaaaacatgaattgcttgaggaagctagaaggcaaggtctgccttttgcacaatgggat
ggccctactgtggtggtgtggctagaattatgggtagggatgccagcatggtatgtggct
gcttgccgagcaaatgtgaaaagcggggccatcatgtctgccttgtctgatacggaaata
cagcgtgaaattggaattagtaatcctctgcacaggttgaaactgaggcttgccattcaa
gagatcatgtcactaacaagtccatctgcccctcctacatcaagaacgactacaggaaat
gtctgggtaacacatgaagaaatggaaaatcttacagccacgccacaaacggaagatgag
gagggaagctgggctcagactctagcatacggtgatatgaaccatgagtggattggcaat
gagtggcttcccagtttgggactccctcaataccgcagctacttcatggaatgtcttgtt
gatgctagaatgctagatcacttgactaagaaagatctccgtggacaacttaaaatggtt
gacagttttcacagaaacagtttccagtgtggtattatgtgtttgcgaaaattaaattat
gaccgaaaagaactggaaagaagaagagaagaaagccagaatgaaataaaagatgttctt
gtatggagcaatgacagaatgatccgctgggtgctgtcaatcggtcttaaagaatatgca
aataaccttatagaaagtggagttcatggtgcacttgtggccttagaggaaacttttgat
ttcaatgcattcgctctattattacaaatacctactcagaacacacagggtcgtgctgtt
ttggagagggaatttaataaccttcttgttatgggcactgacaggagatttgatgaagat
gatgataaaagctttagacgagcaccttcatggagaaagaagtttagaccaaaggacata
aaaggcttagctgctggatctgcagagactcttcctgcaaacttcagagttaccgcctca
atgtcttcaccttctatgcagccaaagaagatgcaaattgatggcaatgtatcaggaaca
caaaggctggattccactacagtaaggacttactcctgttaa
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