Natator depressus (flatback sea turtle): 141991952
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Entry
141991952 CDS
T11397
Symbol
DDX46
Name
(RefSeq) putative ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141991952 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nds03041
]
141991952 (DDX46)
Enzymes [BR:
nds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141991952 (DDX46)
Spliceosome [BR:
nds03041
]
Complex A
U2 snRNP components
U2 related factors
141991952 (DDX46)
Complex B
141991952 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141991952
NCBI-ProteinID:
XP_074816529
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Position
8:complement(12076212..12112872)
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AA seq
1036 aa
AA seq
DB search
MGRESRHYRKRSTSRGRSGSRSRSRSPADKRAKRGEDRRSRSRDRERRRERSRSRDKRRS
RSRDRKRLRRSRSRERERSRERRRSRSRERKRSRSRSRRSRSTSPGKSKKTENRSRSKEK
TEGVEVSKEKKKEKEDKEEEKDKDVSNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIG
ELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEAEEIEDEELDPLDAYMEEVKEEVKKFN
MRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEYSSEEEEVDL
QTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTLDEVNVYRLEMEGIVVK
GKGCPKPIKTWVQCGISMKILSSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKT
IAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGFRVVCVYGGT
GISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQV
MRIVDNIRPDRQTVMFSATFPRAMEALARRILNKPIEVQVGGRSVVCSDVEQEVIVIEEE
NKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIIN
DFKNGVCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAFTFI
TEDQARYAGDIIKALELSGKPIPAELEKLWSDFKDQQKAEGKTIKKSSGFSGKGFKFDET
EHALANERKKLQKAALGLQDSDDEDTALDIDEQIESMFNSKKRVKDMAAPGTSNVPTPTA
GNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTIQAPTVSAKT
IAEQLAEKINAKLNYVPIEKQEEEKQEGGQSESFKRYEEELEINDFPQTARWKVTSKEAL
QRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIR
LQNSYQPTNKGRYKVL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgggccgagagtccagacattatcggaagcgctccacatcacgtggacgttccggtagc
cgctctagaagtcgatctccggctgacaaaagagcaaaacgtggagaagacagacgttct
agaagtagagatcgagaacgcaggcgtgagaggtcacgcagtagggacaagaggagatct
cggtcaagggacaggaagcgcctgagacgttcaagaagcagagagagggaacggagcaga
gagagaagaagatcacgcagtcgagagaggaaacggtccagaagcagaagtagacggtcc
cggtccaccagtcctggcaagagcaagaaaacagaaaacagatcaaggtctaaagaaaag
acggaaggtgtggaagtttccaaagaaaagaaaaaagagaaagaagataaagaagaagaa
aaggataaagatgttagtaactttgatcagaacaaacttgaggaggaaatgagaaaacga
aaggagagagtggagaaatggagggaagaacagcgcaagaaggctatggaaaacatagga
gaactgaaaaaagaaattgaagagatgaaacaagggaaaaaatggagcttagaagatgat
gatgatgacgaggaggagactgcagaaggggaaaaagaagcagaggagattgaagatgaa
gaattagatccactggatgcttatatggaagaagttaaagaagaggtcaagaagtttaat
atgagaagtgtgaaaggtggaggtgggagtgaaaagaaatctgggccgactgttaccaaa
gtagtaaccgtggtgacaaccaaaaaggcagctgcggaatcagaaaagaagaaaggggag
ctcatggagaatgaccaagatgcaatggagtattcgtcagaagaggaggaagttgatctt
cagactgccctgacaggctatcagaccaaacagaggaagctgttggaaccagtggatcat
ggaaagatagaatatgagcccttcaggaaaaacttctatgttgaagttccagagttggct
aaaatgaccctagatgaggtaaatgtatacaggctggaaatggagggaattgtagtcaag
ggaaaaggctgcccgaagccaatcaaaacctgggtacagtgtggtatttccatgaagatt
cttagttcccttaagaaacatggctatgaaaagcccactcccatccaaactcaggctata
ccagcaattatgagtggacgtgacttgattggcattgctaaaacaggaagtggaaagacc
attgcatttctgttgcctatgttcagacacatcatggatcagaggtcattagaagaagga
gaaggtccaatagctgtcatcatgaccccgactcgagagttggctttacaaattaccaag
gaatgtaagaagttctcaaagacacttgggtttagagttgtctgtgtctatggaggaaca
ggaatcagtgaacagattgctgaactaaaaagaggtgctgaaattattgtttgcacacct
ggacgtatgattgatatgttagcagctaataatggtcgggtgacaaaccttcgcagagtt
acatatgttgtactggatgaagcagaccgaatgtttgacatgggttttgaacctcaggtc
atgcgcattgtagacaacatcagacctgatcgtcagacagtcatgttctctgccaccttc
cccagagctatggaggcattagctcgccgaattctgaataagccaattgaggtacaagtt
gggggcaggagtgttgtctgttctgatgtggaacaagaagtgatcgtgatagaagaagag
aacaagttcttgaagttacttgagcttctgggacattatcaagagaaaggatcagtcatc
atatttgtcgataaacaggaacatgctgacgggttgctgaaagatttaatgagagcctct
tatccctgcatgtcacttcatggaggtattgatcaatatgacagagacagcataattaat
gattttaagaacggagtatgcaaacttcttgtggccacatctgtagcagcacgaggcctg
gatgtaaagcaactaatgctggtagtcaattacagctgtcccaaccattatgaagattac
gtgcacagagcaggccgaactggacgagctggcaacaaaggatttgcattcactttcatt
actgaagatcaagcacggtatgctggtgatataattaaggctttggaattgtcagggaaa
ccaattcctgctgagctggagaagctctggagtgacttcaaagatcaacagaaggctgag
gggaaaactattaaaaagagcagcggattctctggcaaaggattcaagtttgatgaaaca
gaacacgctttggctaatgagcgaaagaaactacaaaaagctgctcttggcctgcaggat
tcagatgatgaggatactgctcttgatattgatgaacaaattgagagcatgttcaattca
aaaaaaagagtgaaagacatggcagcaccgggaacatctaatgttcctacaccaacagct
ggtaatgcagaaaaactggaaattgccaaaagactagctttaagaattaatgctcagaag
aatcttggagcagaggcacaagtattggtcccttttcactttaaggatgtgatgcagcag
gctacaaatgctatcttgagaggaggcacaattcaggctcctactgtatctgccaaaact
attgcagagcaactggctgaaaagataaatgccaagctcaattatgtgcccatagaaaaa
caagaggaagaaaaacaggagggaggacaaagtgaatcatttaagagatacgaggaggaa
ttagagatcaatgacttcccacagactgctaggtggaaggttacctccaaggaagctctg
cagagaatcagtgaatattctgaagctgccattacaatcagaggaacgtatttccctcca
ggcaaagaacccaaggaaggagaacgaaaaatttacttggctatagagagtgccaatgaa
ctggctgtgcagaaagcaaaggcagaaatcacgaggcttataaaagaagaacttatcaga
ctgcaaaactcataccaaccaaccaacaaaggaagatacaaagttctgtaa
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