Natator depressus (flatback sea turtle): 141992193
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Entry
141992193 CDS
T11397
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
nds Natator depressus (flatback sea turtle)
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nds03000
]
141992193 (RC3H1)
04121 Ubiquitin system [BR:
nds04121
]
141992193 (RC3H1)
Transcription factors [BR:
nds03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
141992193 (RC3H1)
Ubiquitin system [BR:
nds04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141992193 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
141992193
NCBI-ProteinID:
XP_074817072
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All DBs
Position
8:complement(48204418..48315816)
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AA seq
1136 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IDLLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAPILSDE
GAVDLPSRKSSALPNGIVSTGSTVTQLISRGTDSSYDSALKPGKIDHLSSSAPGSPPDSL
ESVPKSSISALPVNPHPVPQRGPTDLPPMSFSKQPQMVSRGSQLYPPQQADVFYQDPRGA
APPFEPSPYPQGVYYPTQSSQCMSRFVRPPSSAPEPGGPYLDHYPPYVQDRMVNSQYGTQ
PQQYPPMGQPMYQHYESRRVYPSAQPYQREEIVRGSPVPIDVPHGAAPPYVPESRDRYQQ
VEGYYPVGPHLNQIRSSYHREPYNRLPPPSQTHPSLDELHRRRKEIMAQLEERKVISPPP
FAPSPTLTHPFHPEEYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAA
GSVEMANIDSKGIRDQRLDLQRRAAEAGDDDLIPFGDRPTVSRFGAISRTSKTMYQSSGP
MQAMAVQGASTKSINISDYSPYGTHGGWGASPYSPHQNIPSQGRFSDRERLSMSDVASHG
KPLPSAEREQQLRLELQQLNHQISQQTQLRGLEAVNNRLLLQREATTLAGQPQPPPHKWP
AMISSEQLSMELHQVEREIGKRTRELSMETQSSLDMKSNLGTNKQTENGQVEPQSKVPAE
DLTLTFSDVPNGSVLSQENISLLSNKTTSLSLSEDPEGGGDHQDSQRTGVAPTSSP
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggattttctctcctgcccaatttgcacacagact
tttgacgaaacgatccggaagcccatcagcttgggctgtggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgccccttcgaccagaccactatcaatacagat
attgatctcctccctgtgaactcagccttgttgcagctagtgggtgctcaggttcctgag
cagcagccaattactttgtgcagtggagtagaagacaccaaacattatgaggaggccaag
aaatgtgtggaagaattagcgttgtacctcaaaccactcagcagtgcgagaggtgtgggt
ctgaacagtaccactcagagtgtgctaagtcgccccatgcagagaaagcttgtgacgcta
gttcactgccagctagtagaggaagaagggcggatcagggccatgcgtgcagcacggtca
ctaggtgaaagaacagtcacagagctcattcttcaacatcaaaacccccagcaactctct
tccaacctctgggctgcagtgagggccaggggctgtcagttccttgggccagcaatgcaa
gaggaagcactgaagctggttctgctggctctggaagatggatctgctttgtcacgaaag
gtcttggttctctttgtagtgcagagattggagccacgatttcctcaagcttctaaaacc
agcattgggcatgttgtccagcttctttacagagcctcctgcttcaaggtgactaaacgt
gatgaggactcctccctgatgcagttgaaggaggagttccgtacctatgaagctctgcga
agggaacatgattcccagattgtgcagattgccatggaagcaggtttacgcattgcaccg
gatcagtggtcctcgctgctatatggagaccagtcccacaaatcccacatgcagtccatc
attgacaagttgcagaccccagcctcatttgcacagagtgttcaagaactaaccattgct
ctccagaggactggagacccagccaacctgaacaggcttcgacctcacctagagctcttg
gcaaatattgaccctagtccagatgccccacccccaacatgggaacaactagaaaatgga
ttagttgctgtgaggacagtggtacatggactagttgattacattcagaatcacagcaag
aaaggaacagatcagcagcagcctcctcaacacagcaagtataagacatatatgtgccga
gacatgaagcagagaggagggtgtccccgtggagccagctgcaccttcgcacattcgcag
gaggaattagaaaaatttcgtaaaatgaacaaacgcctggttcccagaagacccctgagt
gcctccttgggccagctaaatgaggtgggcctgccttcagcacctatcctctcggatgaa
ggggcagtggacttgcccagtagaaaatcctctgccttgccgaatgggattgtgtctaca
ggcagcacagtgacgcagcttatctcccgagggaccgactccagctatgattctgctctg
aagccagggaagatcgaccacctgagcagcagtgctcctggatcccctcctgactcgctg
gagtctgtccccaagagctctatttctgccttaccagtgaacccccaccctgtgccccag
agaggaccgacagacctgcctccaatgtctttctccaagcaaccccaaatggtatcacga
ggatcacagttgtatcctcctcaacaagcagatgtgttttatcaggatcctagaggagct
gccccaccatttgagccgtcaccttatccacaaggtgtgtactatcctactcagtcctca
cagtgcatgtctcgttttgtccgacctccatcatctgctcctgaacctggtggtccttac
ctagaccattacccaccctacgttcaggatcgtatggtgaattcgcagtatggcacacag
ccgcagcagtatcctcccatgggacagcctatgtaccaacactatgagagccgtcgtgtg
tacccctctgcccagccataccagcgggaagagattgtccgaggaagccccgtgcccatt
gatgttccacatggagctgcacctccctacgtacctgaatccagagacagataccagcaa
gtggagggttattatccagtgggtccacatctcaatcagatcagatcttcataccacaga
gagccttataaccgacttccacctccatctcaaacccatcccagcctggatgagcttcat
cgtcgaaggaaggaaatcatggcccagttagaagagaggaaggtcatctccccacctccc
tttgcaccgtcaccaactttgactcaccccttccacccagaggagtacttggatgaagac
ctgaaggtagctgggaaatacaaaggaaatgattatagccagtactctccttggtcgtgt
gacaccattggctcctacattggaaccaaagatgcaaaacccaaagatgttgtggcagca
gggagtgtagagatggcgaacatagacagtaaaggcatacgtgaccagcggttggaccta
cagagaagggcagcagaagctggggatgatgacctcatcccatttggagaccggccaact
gtatcaaggtttggggccatctcgcgtacttccaaaacgatgtaccagagttctggcccc
atgcaggccatggcggtacagggagcttccaccaaatctatcaacatttcagattacagt
ccatatggaactcatggtggctggggagcttctccatattcaccccaccaaaacatacct
tctcagggacgcttcagtgacagggagagattgtccatgtcagatgtggccagtcacggg
aaacccttaccctcagctgagagggagcagcaactcaggctggaactgcagcaactaaac
catcagatcagccagcagacacagttacgaggactggaggctgttaataacaggctgctg
ttacagagggaggcaaccaccctggcaggccagccacagccaccacctcataaatggcct
gcaatgatctcaagtgaacagctgagtatggaactgcaccaggtggagagggaaatcgga
aagagaacccgtgagctgagcatggagacccagtcttcactggacatgaaaagcaacctt
ggcaccaataaacagacagaaaatgggcaagtcgaaccacaaagcaaggttccagctgag
gacctcacactgacgttcagtgatgttccaaatggatcagtcttgtcgcaagagaacatc
agcctcctatcaaacaagaccacatctctgagcctgtcagaggatccagaagggggagga
gaccaccaggactcccagagaacaggagttgcacccacctcttctccatga
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