Natator depressus (flatback sea turtle): 141992202
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Entry
141992202 CDS
T11397
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds04510
Focal adhesion
nds04512
ECM-receptor interaction
nds04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141992202 (TNR)
04518 Integrin signaling
141992202 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141992202 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nds00536
]
141992202 (TNR)
Glycosaminoglycan binding proteins [BR:
nds00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141992202 (TNR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
FN3_DSCAM-DSCAML_C
EGF_Teneurin
EGF_Tenascin
Fn3_PBP1
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_ROS1
Fn3_VIN3
EGF_2
FN3_Tor_3rd
DUF7949
Fn3_R-PTP-O
TMF_TATA_bd
EGF
DUF1192
TSC22
Motif
Other DBs
NCBI-GeneID:
141992202
NCBI-ProteinID:
XP_074817089
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All DBs
Position
8:complement(49065978..49350046)
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AA seq
1356 aa
AA seq
DB search
MGADSENLVLRNMLIGLNLLLLGSVLKPFECRLEVTTERMRRQVVDKEGNFANYSPPIKE
QSMVFNHVYNINVPLDSFCSSALEASSDQEVSSEDDRMTEYTEQTSDSESQVTFTHRINL
PKQACKCFTSVQVMQELQSRIEMLEREVSMLRDQCNSNCCQENAATGQLDYIPHCSGHGN
FSLESCGCICNEGWAGKNCSEPYCPMGCSSRGICVEGQCICDNDYSGDDCSELRCLTDCS
SRGLCVDGECICEEGYAGEDCSELRCPDDCLGKGRCTNGTCICQEGYVGEDCGQLRCLNA
CSGRGFCQKGMCACEEGYKGQDCSAVAPPEDLRVAGISDRSIDLEWDGPMAVTEYVISYQ
PVVPGGLQLQQRVPGEWSAVTIKELEPSQTYNITIYAVISDILSVPVTTKVTTHLSTPQG
LQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSSVTTFNQTGLKPGEEY
IVNVVALKEQARSPPTSDSISTLIDGPTQILVRDVSDTVAFVEWTPPRAKVDYILLKYGL
TNGEGGKTMFRLQPPLSQYSMQALRPGSQYEVSISGVRGTNESDPAVTTFTTEIDAPKNL
RVGLRTLASLALEWDNSEAEVQNYRVVYSTLAGEQYHEVLVPRNAGLTTRATLTDLVPGT
EYGIGISAVMDSKQSVPATMNARTELDSPRNLVVTASTETSISLAWTQAKGPIDHYRITF
TPASGMASEVTAPKDKSELTLSDLDPGTEYTISVIAERGRQQSLESTVDAFTGFRPITQL
HFSHVTSSSLNITWSDPSPPADRFILNYNPRDKEETKQVMLDATKRHATLSGLQPSTEYI
VSLVAVHGLVSSEPIVGSITTGIDPPKNLTVGNVTKDSVMIFWAPPITAFDHYRVSYRSA
QGRVDSTAVANDVAEYTLSRLQPATKYEISLSSVRGREESERVSSTVYTAMDHPLGLTAT
NVTPTEALLQWNPPLSEVENYVIVLTHYTVAGETILVDGANQEYQLIDLMPSTSYMVTMY
ATNGPLTSSTISTNFTTLLDPPTNLTATEVTRRSALLSWQPPMAEIENYIMTYRSTDGSR
KELIVDAEDTWIRLEGLLETTEYTVRLQAAQDAMRSGFTSTSFITGGRVFANPQDCAQHL
MNGDTMSGLYTISINGDLSQRVQVYCDMTTDGGGWIVFQRRQNGLTDFFRKWMDYRVGFG
NLEDEFWLGLDNIHKITSQGRYELRIDMRDGQETTYAYYDKFSLGDARSLYKLRIGDYNG
TSGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGIN
WFHWKGHEFSIPFVEMKMRPYNHRNVSGRKRRSLQL
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgacagtgaaaacttagtcctgaggaacatgcttatcggtctcaacttgctc
ctgctgggatcagtcctcaagccctttgagtgccggctagaggtgacaacagagcggatg
aggaggcaggtagtggacaaggaaggcaactttgccaactacagcccgcctatcaaggag
caatccatggtcttcaaccatgtatacaacattaacgtccccctggacagcttctgctcg
tcagcgcttgaggcatcatctgaccaggaggtgagttcagaagacgacaggatgacggaa
tatacggagcagacctcagacagcgagagccaggtcaccttcacccacaggataaacctc
cccaagcaggcttgcaagtgcttcacctctgtccaggtcatgcaggagcttcaaagcaga
attgagatgctggagagggaggtgtccatgctacgggaccaatgcaactccaattgctgc
caagaaaatgcagctacagggcagctagattacatcccccactgcagtgggcacggtaac
tttagcctggagtcctgtggctgcatctgcaatgaagggtgggctggaaaaaactgctca
gagccctactgccccatgggctgttccagccggggaatctgcgtagaaggccagtgcatc
tgcgacaacgactacagtggggacgattgctcagagctccgctgcctgacagactgtagc
tcccgaggcctctgcgtggacggggagtgcatctgtgaagaaggttatgcaggggaagac
tgcagcgagctgaggtgccccgatgactgcttgggaaaggggagatgcaccaatggcacc
tgcatctgtcaggagggctacgtgggggaagactgtggtcagttgagatgcctgaatgcc
tgcagcggacgtgggttctgccagaaggggatgtgcgcttgtgaggaaggttacaaggga
caagactgctcagcagttgccccacccgaggatctgcgagtggctgggatcagtgacagg
tccattgacctggaatgggatgggccaatggcagtgacagagtatgtgatctcctaccag
ccagtggtgccggggggccttcagctccagcaacgggtgcctggagaatggagtgctgtc
accatcaaggagctggagccgagccaaacatataacatcaccatctacgctgtcatcagc
gacatccttagcgtccccgtcactaccaaggtgactacccatctctccactccacaaggg
ctgcagttcaagacgatcacagagaccaccgtggaggtgcagtgggagcccttctctttc
tcttttgatggctgggagataagcttcatccccaagaacaatgaaggtggcgtcatcgca
cagcttcctagcagtgtcaccaccttcaaccagacaggactgaagcctggggaagaatac
atcgtcaatgtggtagccctcaaggagcaagccaggagcccccctacctccgacagcatc
tccaccttaattgatgggccaacccaaatcctggtgcgagatgtctcggacacagtggcc
ttcgtggagtggaccccaccccgagctaaagtagactacatcctgctgaagtacggcctc
acgaatggggaaggggggaagaccatgttccgactgcagcctcccctgagccagtactca
atgcaggccctgaggcccggctcacagtacgaagtctccatctccggggttcgagggacc
aacgagagcgaccctgccgtcaccaccttcacaacagagattgatgcacccaagaacctc
cgggtgggcttgcgaacgttggccagcctggcactggagtgggacaacagtgaggcggag
gtgcagaactatagggtggtgtacagcacactagcaggcgagcagtaccacgaggtgctg
gtgccgcggaacgctggcctgacaacccgggccaccctcacagatctggtgccaggaacc
gaatatggaattgggatatcggccgtcatggacagcaagcagagcgtcccagccaccatg
aacgcgaggactgagcttgacagccctcggaacctcgtggtgacagcctccacggaaacg
tctatctccctggcctggacccaggcaaagggccccatcgaccattaccgcatcaccttc
actccagcttccgggatggcctccgaggtgactgcacccaaggacaagtctgagctgaca
ctctcagacctggatcccggtacagaatataccatctcagtcattgccgagagaggccgt
cagcagagcctggagtccacagtggatgcattcacagggttccgaccaatcacacagctg
catttttctcatgtgacttcctccagcctgaacatcacctggagtgacccctcccctcca
gcagacaggtttatcttgaactacaatcccagagacaaggaggagaccaagcaggtcatg
ctagatgccaccaagagacacgccaccttgtctggcttgcaaccatctacggagtacatc
gtgtcactggtggctgtgcatggtttggtcagctccgagcccatagtgggctccatcaca
acagggatcgaccccccgaagaacctcactgtgggcaacgtaaccaaggactccgtgatg
atcttctgggcccctcctatcacagcttttgaccactacagagtgtcctaccgatctgca
caagggagagtggacagcacggcagtcgccaatgacgttgccgaatacaccctcagccgc
ctgcagccagcgaccaagtacgagatcagcctgagcagcgtgcggggccgggaggagagc
gagcgggtctccagcaccgtgtatacagccatggaccaccctctgggtctgactgccacc
aatgtcaccccaacagaagccctgctccagtggaacccacctctttctgaagtcgagaac
tacgtcattgtgctaacacactacacagttgcaggggagaccattctagtggacggggcc
aaccaagagtaccagctgatcgacctgatgcccagtaccagctacatggtcaccatgtat
gccaccaatgggcctcttacaagcagcaccatcagcaccaactttacgactcttctggat
cccccgactaacttgactgccactgaggtcacccgccggagcgccctcctttcatggcaa
cctccaatggcagagatcgagaactacatcatgacctatagatcgactgatggaagccgg
aaggagctgatagtcgatgctgaggacacctggatccgcctagaggggcttttggagacg
acggaatacaccgtacgcttgcaggcagcccaggatgcgatgaggagtggattcacctcc
accagcttcatcacaggaggccgcgtgttcgctaatcctcaggactgtgcccagcatttg
atgaatggcgacaccatgagtggactctacaccatctccatcaatggggacctcagccag
cgagtgcaggtgtactgcgacatgaccacggatgggggaggatggattgtgttccagaga
cggcagaatgggctgacggatttctttcgaaagtggatggattaccgcgttggctttgga
aacctagaggatgagttttggctggggctggacaacattcacaagatcacatcacaggga
cgctacgagctacgaatagacatgcgagatggccaagagacaacttacgcctattacgac
aagttctcccttggtgacgccaggagtttgtacaagctccggataggagactacaacggc
acttccggagattcactcacctaccaccagggacgtccgttctccaccaaggacagagac
aatgacgttgctgttacaaactgcgccatgtcatacaaaggtgcctggtggtataagaac
tgccaccggaccaacctcaacggcaagtacggcgagtcccggcacagtcaggggattaac
tggttccactggaaaggccacgagttctccataccctttgtggaaatgaagatgcgaccc
tacaaccaccgtaatgtctcgggaaggaaacgacggtccctacagctgtga
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