KEGG   Natator depressus (flatback sea turtle): 141994050
Entry
141994050         CDS       T11397                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
nds  Natator depressus (flatback sea turtle)
Pathway
nds03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nds00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    141994050 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nds03019]
    141994050 (WDR33)
Messenger RNA biogenesis [BR:nds03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     141994050 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Collagen Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 141994050
NCBI-ProteinID: XP_074820125
LinkDB
Position
9:46554845..46658232
AA seq 1319 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPPELMNDRKEDIKLEEKKKTQAE
IEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQQQAPPPGGPLHGPQPFPGQGPMSQMPQ
GFQQPIPPQQMPMNMPQMGPPGPQGQFRPGGPQGQMGPQGPPLHQGSGGPQGFMGPQGPA
GPQGPPQGLPRPQDLHGHQGMQRHPGPHGPMGPQGPPGPQGNSGPQGHLGPQGPPGSQTH
LGPQGHLGPQGPPGGQGMQGPPGPRGMQGPPLPHGMQGGPGSQGMQGPISQGPLMGLNPR
GMQGPPGPRDNQGPAPQGMMMGHPQEMRGPHMQGGLLGHGPQEMRGLQGPPPQGSMLGPP
QELRGPPGAQGQQGPPKNSLVGPQGSMQGPSGPPGQQNPSRGSHPPQGPLPFQQQKTPLL
GDGPRVPFSQEGQNPGPPPLIPGLGQQGGQGRLAPHNQGPGPNKGDNRGPPNHHMGPLSE
RRHDQNSGGPDHGPERGPFRGGQEWGDGRDNRGLPDRRGPHPDFHDDFDRPDDFHPDKRF
GHRLREFEGRGGPLLQDEKWRRGGPGPPFPPDHRDFEGGGPNRGPPGPWEGRRPSDERYP
REPEDARFRGRRDESFRRGAPSRHEGRGPRGRDSFPGPEDFGPEDNFNSSDENSRGRDHG
GRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPESWDGNREPGSRQDHPPHDGQSPASRER
SSSLQGMDMASLPPRKRPWHDGPGTSDHREMEAPGAPPEERGKGRGSSGPSQRVPKSGRS
SSLEGDHHDGFHRDEGFGGPAGGNNPSRGGRSGSNWGRGSNMNSGQSRRGASRGGGRGR
NT seq 3960 nt   +upstreamnt  +downstreamnt
atggccacagaaattggctccccaccccggtttttccatatgccgaggttccagcaccag
gcacctcggcagctgttctacaagagacctgattttgcacagcagcaggcaatgcagcag
ctcacctttgatgggaaacggatgagaaaagctgtgaaccggaaaaccatagactacaat
ccttctgtaattaaatatttggagaatagagtatggcagagagaccagcgagatatgcgg
gcaatccagcctgatgcaggatattataatgatctggtccctcctataggaatgctgaat
aaccctatgaatgctgtaacaacaaaatttgttaggacatctaccaataaagtaaaatgt
ccggtgtttgttgtcaggtggactcctgaagggaggcgcttggtcactggggcttctagt
ggagagttcaccttgtggaatggattgactttcaattttgaaacaatattacaggctcac
gacagccctgtaagggccatgacttggtcgcacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgagggcatggggcagatgtgaagtgtgttgactggcatccaacaaagggattggttgtg
tcaggaagcaaagacagccaacagcctatcaagttttgggatccaaaaactggccagagt
cttgccacgctacatgctcataaaaacacagtgatggaggtaaagttgaacctgaatggg
aattggctgcttacagcatctcgtgaccacctctgcaagctgtttgacatccgaaacctg
aaagaagagctccaagttttcaggggtcacaagaaagaggccacagctgtggcctggcac
cctgttcatgaagggctttttgccagtggagggtctgatggttctttgttgttctggcat
gttggggtggagaaagaggttggcggaatggaaatggcccatgagggaatgatctggagt
ctggcttggcatcctcttggacacattctctgctccggctcaaatgatcatactagcaaa
ttctggactcgaaatcggcctggagataaaatgagagatcgttacaaccttaacctgctg
ccaggaatgtcagaggatggcgtggaatatgatgaccttgaacccaacagccttgcagtg
attcctgggatgggaatacctgagcaactgaaactagccatggaacaagagcagatgggg
aaagatgagtcaaatgaaattgagatgacaatcccagggctggactggggaatggaggag
gtgatgcaaaaggaccaaaagaaagtgccacagaaaaaagtgccctatgcgaaaccaatc
ccagcacagtttcagcaggcttggatgcagaataaggtccctatccctgctccacctgag
ctgatgaatgacagaaaggaggatattaaactggaggagaaaaagaaaacacaagcagag
atcgagcaggaaatggcagcacttcagtacaccaacccacagctcttggagcaactgaag
attgagagacttgcacaaaagcaagctgagcaagtccagcagcaggcaccacctccagga
ggccctctgcatggaccccagcctttcccaggacaaggcccaatgtcgcagatgcctcaa
ggatttcagcagcccattccacctcagcagatgccaatgaatatgcctcaaatgggaccc
cctggtccacagggacagttcagacctggaggaccccagggacaaatgggaccccaaggt
cctccattacatcaaggatctggaggtccacaaggcttcatgggaccacaaggacctgcg
ggtccccagggacctccacaaggactgccaaggcctcaggatctacatgggcatcaagga
atgcagagacatcctggacctcatgggcccatggggcctcaagggccaccaggtccacag
ggtaattctggcccacagggtcacttaggaccacaaggtccacctgggtctcagactcat
ttagggccgcaaggtcacttaggtcctcaaggtccccctggtggtcaaggaatgcagggg
ccacctggtccaagaggaatgcaagggccgcctcttcctcatggaatgcaaggaggtcca
ggatctcaagggatgcagggccctatatctcaagggcctttgatgggacttaatccaaga
gggatgcagggtccaccagggccccgtgataatcagggacctgctccacaagggatgatg
atgggtcatccgcaagaaatgagaggacctcacatgcagggtggtttactcggacatggt
ccccaggagatgaggggcctacagggacccccacctcaaggttcaatgttaggacctcca
caggaattacgtgggccgccaggtgcacaaggccagcaggggcctccaaagaactcttta
gttgggcctcaaggaagtatgcaaggaccgtcgggacctccgggacagcagaatccttca
agggggtcacatcctccccagggcccactacctttccagcagcagaaaacccctctgctt
ggtgatgggcctcgtgtcccattcagtcaggaaggacagaacccaggtcccccaccattg
ataccaggactggggcagcagggaggacaaggccgtctcgcccctcacaaccaaggacct
ggtcctaataaaggtgacaaccgtggcccaccaaaccatcacatgggccctctctcagaa
agaaggcatgaccaaaacagtggtggtccagatcatggccctgagagagggccattccga
ggtggccaggagtggggtgatggtagggacaacaggggcctgcctgatagacgaggacct
cacccagattttcatgatgattttgatcgaccagatgattttcatccagacaagcgattt
ggccaccgattgcgtgaatttgaggggcgaggtggcccactgctacaagatgagaaatgg
agacgaggtggcccagggcccccctttccccctgatcacagggactttgagggagggggc
ccaaatcgtggccctcctgggccttgggaaggacggagaccctctgatgagagatatcca
cgagaacctgaggatgcaagattccggggaagacgggatgaaagctttagaagaggagca
ccctcaagacatgaggggcggggacccaggggaagggatagttttcctggtccggaagac
tttgggccagaagacaattttaactcgtcagatgagaactcaagaggaagagatcatggt
ggtcgggggcgaggtcgaggtactccaagaggaggccgaaagggtctacttcccactcca
gatgagtttccccgctttgaaggagggcggaaaccagaatcctgggatggaaacagagaa
ccaggttcccgtcaggatcaccctcctcatgatggacagtctcccgccagccgagagcgt
tcttcctcacttcagggtatggacatggcctcactgccaccacgcaaacgtccctggcac
gatggaccagggacatctgatcacagagaaatggaagctccaggtgcacctccagaggag
agaggcaaaggacgaggaagctcaggaccttcacagagagtgccaaagtctgggaggtct
agctctttggagggagaccatcatgatggattccacagagatgaaggttttggaggccct
gcaggaggcaataacccttccagaggagggaggagtggaagtaattggggaagaggaagt
aacatgaactctggccagtcaaggcgaggagcatccaggggtggtggaaggggccgatag

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