Natator depressus (flatback sea turtle): 141994694
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Entry
141994694 CDS
T11397
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03440
Homologous recombination
nds03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141994694 (PALB2)
03460 Fanconi anemia pathway
141994694 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nds03400
]
141994694 (PALB2)
DNA repair and recombination proteins [BR:
nds03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
141994694 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
141994694 (PALB2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141994694
NCBI-ProteinID:
XP_074821046
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Position
10:2134733..2150203
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AA seq
1317 aa
AA seq
DB search
MEGPAVGKALGWQEKEKLKEKLAFLKREYSKTFNRLQRAQRAERVKNYVKKTVAEQNQLL
RQEETENNTTELMDKQSPNDDDKSGICMLQTNTCSDSGTEKKMSVTFKLEPEFFNNEVNL
QESSLAESTNSDQENILSGLMRSVTEENQSQLSRSRMTLVSEGRESACEVPPISAGETLE
NQMGSTEEPGSPVFKGRNTISNTKNKIQKAPKLVIVREEKGLTPQDPQVGDFQEMPEENV
FVSVPKPLSCMSMGGNNIQQPVSPCAEDICDSYEPLPQCLVGDMPVSLQNIENTGKELAC
IENQMDREELCRAFDLTADNQPSLAGRSNPSTSESRPHKERNHNETKSSSPLNTDSLLDK
VEQPLRNQEAQTEAGSPVLEKTPPAAESALSSCTMIEGLLFPVEYYVRTTRRMSNCQRKV
DLEAVILSQLGRSRKGLRSKHKQINSNSDQLYQETTRSDLQAGGTPFPFLSAESDPVSSN
SSQKSLPPSDESCTSSGSLSQKTVISMKQAKGKSWRRGRGRWGSTCRPALNGSQAHPETS
DLTVLKENSHLLSNDSQLGKENCEGDRERSPIGKTRVLVPAAGEATEAEMTDIIWPTEAH
LPDVSQTFSKCHQPPLEHIQNPLQGNNFLNPWDEAFSSPTRELEANVNVSQADKQPVGHI
RNQCVQKACLAEQLPTVKESLLQHDLPSSSVKRKVRQGSKGKRGRSQQMDLEGPTPLSHL
GLDPMAFDPPFHFQNEMLSVKWLPCKLDIKDFHLPDEEFGLLKFEKLQSCTVKQLEPFVP
SGSEHWLQSAGDTVALGDMRLKQVNTEGKSLENSFISPSKTMSPKLPHLEGQLHKKGLSP
SELLLTPASSVSAGAINQLESQIPTPAFPVLGATPAILSLVHNEALPDTLSVLPLQVKTN
LFKEPASHVVDGRECNNSTGTLHSDSCRTGSDCRSDEAVPLKEYQQPGSGSKECCGAENE
LTAEELAVVLSDSLRARSLQLASKLKNPSSSCAVDVSTVWWESAGCTELCIVTACETFIS
LWKPLASSQWRKVYTWHLTEIPVIQIVPLPDVSNLVCVALGDLEIGEIRLLLCSSEDGSL
KQSLVKTGNIKAVLGLTNRRLVSSSGTLQDQQIEIISVSEAGRSNERQTLMPPEETILAF
AEVEGIRDALVGTTAVNSLVVWNLKTGQILKKMHVGYSYPASICHRAYSDSGLLFVVLSH
PHAKENESCGNPAFRMRVFNPKTARSTGVMFFSLPPGHSGRYLEGEVKGVSAAAVLTSGT
IAVWDLFLGQCTALLPPNADGNWSLVRWSVTDSCLLAGQKDGSVYVYHYSQAKAVGK
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggagggccccgccgtgggaaaggcgctgggctggcaggagaaggagaagctgaaagaa
aagttagccttcctgaaaagagaatacagcaaaacattcaacaggttacagcgtgcacaa
agagctgagagggttaaaaattatgttaagaaaacggttgcagaacaaaatcaattgctt
aggcaagaggaaactgagaataataccacagaactgatggataaacagtctcccaatgat
gacgataaatctggaatatgtatgttacagaccaatacctgttctgactcaggcactgag
aaaaaaatgtctgtcacatttaaacttgagcctgaattcttcaacaatgaagttaacttg
caggaaagttcattggcagaaagcacaaatagtgaccaagaaaatatcctctctggcctc
atgagatctgttactgaggagaaccaaagccaactgtcaaggagtagaatgactttggtc
tcagaggggagagaatcagcttgtgaagtgccaccaatcagtgctggtgaaacgctggaa
aatcaaatgggaagtacagaggagcctgggtcaccagtattcaagggaaggaacaccatc
tcaaacaccaagaataaaatccaaaaggcccccaagctggtcattgtgagggaagaaaaa
ggtttaactcctcaagatccacaggtaggagattttcaggaaatgcctgaagaaaatgta
tttgtgagtgtccccaaaccactttcatgcatgtcgatgggtggcaataacattcagcag
cctgtgtctccatgtgctgaggacatctgtgatagctatgagccattgccccagtgttta
gtgggtgatatgcctgtttcacttcaaaacatcgagaatacaggaaaagaacttgcctgt
atagaaaaccaaatggatcgggaagagttgtgtagggcctttgatttaactgcagataat
cagccatccctggcaggcagaagcaaccctagcactagtgaaagcagaccccataaagaa
agaaaccacaatgagaccaagagctcaagtcctctgaacactgactctcttctggataag
gttgaacaacctttgaggaatcaagaggctcagactgaagcagggtctcctgtcctagag
aagactcctcctgcagcagaaagcgcactgagctcttgcacaatgattgaaggactcctc
tttcctgtagaatattatgttaggacaactcggcgtatgtctaattgccagaggaaagta
gacctggaggctgtcattctcagccagttgggcaggagcaggaaagggctgcgaagtaaa
cataagcagataaattcaaattcagatcagctctaccaagaaaccaccagaagtgatttg
caggcagggggcactccgttcccttttctaagtgcagagagtgacccagtgagttcaaat
agttctcagaaatctctccctccatcagatgagagctgcacttccagtggctctctttct
caaaagactgttattagtatgaaacaagctaagggaaaatcctggaggagaggaaggggc
agatggggttctacctgcagacctgcactgaatgggtcacaagcacatcctgagacttca
gatcttacagtgctaaaggaaaacagtcatctcttgtcaaatgattctcaacttggaaag
gagaactgtgagggtgaccgtgagaggtcacctataggcaaaacaagggtgctcgtccct
gcagctggtgaggctacagaagcagaaatgacagacattatatggccaacggaggctcat
cttcctgatgtaagccaaacattcagcaaatgccatcagcctccattagaacatattcaa
aatccactccaaggaaataatttcttaaatccatgggatgaagctttctccagccccacg
cgagaactggaagctaatgtaaatgtgagtcaggctgataagcagccagtggggcacatt
aggaatcagtgtgttcagaaagcctgcctggctgagcagctgccaacagttaaagaatct
ctacttcagcatgatctcccaagttcctccgtgaaacgtaaagtgaggcaaggatctaaa
ggtaaaagagggcgcagtcaacagatggacttggaaggtccaactcctctaagccatctt
ggtctggatcctatggccttcgatcctccctttcacttccagaatgagatgctcagtgtc
aagtggctgccctgtaagctggacatcaaagactttcatttacccgatgaggagtttggt
ctccttaaatttgagaaactacaatcctgcacagtgaaacagctggagccctttgttcct
tcagggtctgaacactggctccagagtgctggagacactgtggctttaggggacatgaga
cttaaacaagtgaatacagaagggaagagtctagaaaatagctttatttctccttcaaag
actatgtcacctaaactgcctcacttagaagggcagttgcacaagaaggggctttctcca
agcgaattgctgctaactccggcaagttctgtctcagctggtgcaatcaaccagctggaa
tcacagattcctacacctgctttccctgtcctgggtgcaaccccagctatcctgtcactg
gtacacaatgaggccttacctgacacactttctgtacttcctttgcaagtgaaaacaaat
ctcttcaaagaaccagccagtcatgttgtggatgggagagagtgtaataactccacaggt
acattgcactcagatagctgcagaacaggatctgactgtaggtctgatgaagctgtcccc
ctcaaagagtatcagcaaccagggagcggttccaaggagtgctgcggtgcagagaacgaa
ctgacagcagaagagttggccgtggtgctgagtgacagcctgagagccaggagcttgcaa
ctggcctcaaagctaaagaacccctcaagttcttgtgctgtggacgtgagcaccgtctgg
tgggaatcagctggctgcacagagctgtgtatcgtaactgcttgtgagactttcatttcc
ctgtggaaacctctggcttccagccagtggagaaaggtgtatacctggcaccttacagag
attccagtaatacaaattgttcccttgccagatgtctctaatcttgtatgcgttgccttg
ggagatctggagattggagaaataaggctcttgctttgttcttctgaagacggctcctta
aagcaatcactagtgaaaactgggaacataaaagctgttcttggtctgacaaacaggagg
ctggtcagtagtagtgggacacttcaagaccagcaaatcgagataatctccgtttcagag
gcaggaagaagcaatgagaggcagactttgatgcccccagaagaaaccattctggctttt
gctgaggtagaagggattagagatgctttggttggcaccactgcagtgaacagccttgtt
gtttggaacttgaaaactggccagattctgaaaaagatgcatgttggttattcctaccct
gcctcaatctgccatcgcgcctattctgactctggcctcctgtttgttgttttaagtcac
ccacatgccaaagagaatgagtcctgtggaaaccctgcattccggatgagagtgttcaat
cccaaaacagccagaagcactggggtaatgttcttctccctcccccctggacacagtgga
aggtacctggaaggcgaagtgaagggtgtctctgcagcagctgtgctaacatctggaaca
atcgcagtgtgggacttatttttaggccagtgtactgctctgcttccaccaaatgctgat
gggaattggtctttggtcagatggtcagtcacagattcctgtctcctggctggacagaaa
gatggaagcgtgtatgtgtaccattattcacaagccaaagcagtaggaaagtaa
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