Natator depressus (flatback sea turtle): 141995881
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Entry
141995881 CDS
T11397
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141995881 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nds03041
]
141995881 (PRPF40A)
Spliceosome [BR:
nds03041
]
Complex A
U1 snRNP components
U1 related factors
141995881 (PRPF40A)
Complex B
141995881 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
141995881
NCBI-ProteinID:
XP_074823456
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All DBs
Position
11:complement(28410081..28455772)
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AA seq
961 aa
AA seq
DB search
MPFGPSSRQQLRGRLLGRCGGGSLLNPSMRPGGVDRGSLMMGHPGMPHYPPMGMHPMGQR
PPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSMMPGMMMSHMSQAHMQPTVPPGVNSMD
TQVGTTPPGTQITHQIVCAAQQTTTTNSCINEDPSKQKSMWTEHKSPDGRTYYYNTETKQ
STWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEAMIKAE
ENSSKPEESTPTSSAPAVATEITDTTAAAAAAAAATTTTTTSDVETAVAATPATAIPAVA
AAPEAEASTVAAVVENESTVTTTAEEQVQQTTTTTTAAATTIATPVVQEQNVEAVTNTVE
ETSKQEPSVDVAPKKEEEDTQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKM
IINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTT
RYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNM
ANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLL
RERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPVFSLGSTA
LDLFKFYVEDLKARYHDEKKIIKDILKDKGFLVEVNTTFEDFVTVISSTKRATTLDAGNI
KLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKE
PAFEDITLESERKRIFKDFIHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESDDD
DSHSKKKRQRSESRSVSDRSSSAESERSYKKSKKHKKKNKKRRHKSDSPESDTEREKDKK
EKERENEKDRPRQRSESKHKSPPKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDED
Q
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgccctttggcccctcgtcgcggcagcaacttagagggaggcttcttggcaggtgtggc
ggggggagcctcctgaacccctcgatgaggccgggcggagtggatagaggatccctcatg
atggggcatccaggcatgccgcattatccacctatgggaatgcacccgatgggccagagg
ccaccgaacatgccaccggttccacatggaatgatgcctcagatgatgcctccaatgggc
ggaccaccaatgggacagatgcctggaatgatgcagtcaatgatgcctggaatgatgatg
tctcatatgtcccaagcacatatgcagcctactgtaccgccaggagtaaacagtatggac
acacaagtaggcactacaccacctggaacacagatcacacatcaaatagtttgcgcagcc
cagcaaaccaccacaaccaacagttgtataaatgaagatccttctaaacagaaatctatg
tggactgaacataaatctccagatggaagaacttattattataatactgaaacaaaacaa
tctacatgggagaagccagatgatctcaaaacacctgctgagcaattgttatctaaatgc
ccttggaaagagtacaaatctgactctggaaagccttattactacaattcccaaacaaaa
gaatcacgctgggcaaaacccaaagagcttgaagatcttgaagcgatgattaaagctgaa
gaaaacagcagtaaaccagaagaatcaactccaacatcttctgctccagctgttgcaaca
gaaattacagataccaccgctgctgccgccgccgccgccgccgccaccaccaccaccacc
actagtgatgttgaaactgccgtggctgctactccagccactgccattcctgctgtagca
gctgctcctgaagctgaagcttctacagtagctgctgttgtagaaaatgaaagtacagta
actacaacagctgaggaacaagtgcagcaaactacgaccaccaccaccgccgctgccaca
accatcgccacccctgttgtacaagagcagaatgtagaagctgtcactaacactgtagag
gaaacttctaaacaggagccttcagtggatgttgctcccaaaaaagaggaagaggacacc
cagccagttaaaaaaacatacacatggaatacgaaagaagaagcaaagcaagcatttaaa
gaactgttgaaagaaaagcgtgtaccatccaatgcctcatgggagcaagctatgaaaatg
atcattaatgatcctagatacagtgcattggcaaagttgagtgaaaaaaagcaagccttt
aatgcttacaaagtccagacagagaaagaagaaaaagaagaagcaagatcaaaatacaaa
gaagctaaagaatcctttcaacgtttccttgaaaaccatgaaaagatgacatctacaaca
agatacaaaaaagctgaacaaatgtttggtgaaatggaggtctggaatgcaatatcagag
cgtgatcgtcttgaaatttatgaagatgtcttgttctttctgtctaaaaaggaaaaggag
caagccaagcagttacgaaagaggaattgggaggctttgaaaaacattttggacaacatg
gctaatgtaacatactctaccacttggtcggaggcccagcagtatctgatggacaatcct
acatttgcagaggatgaagaacttcagaatatggataaagaagatgcactgatttgtttt
gaagaacacatcagagctttggaaaaagaagaggaagaagaaaaacaaaagagtttgctt
agggaaaggcgacgacaacgtaaaaatagagaatcttttcagttatttttggatgaatta
catgaacatgggcagttacattcaatgtcctcctggatggagttgtatccaaccataagt
tctgacatcagatttactaacatgcttggtcagcctgttttttcattaggatcaactgca
cttgatcttttcaagttttatgttgaagatttgaaagcacgttaccatgatgaaaagaag
ataataaaagacatcttaaaggataaaggatttctggttgaagtgaatactacttttgaa
gactttgttacagtcatcagttcaactaaaagagcaaccactttagatgctggaaatatc
aaactggctttcaacagtttgctggaaaaggcagaagcccgtgaacgtgagcgggagaaa
gaagaggctcgcaaaatgaagcggaaagagtctgcattcaagagcatgttaaaacaagct
acacccccaattgaattggatgctgtctgggaggatatcagagatagatttgtgaaggaa
ccagcatttgaagacatcactctagaatctgaaagaaaaagaatctttaaagactttata
cacgtactagagcacgagtgtcaacatcatcattcaaagaataagaaacattctaaaaag
tctaaaaagcatcacagaaaacggtctcgctcccgttcgggctcagagtctgatgatgat
gatagccattcaaagaagaagaggcaacgctcagaatctagatcagtttctgatcgttct
tccagtgcagaatctgagagaagttacaagaagtcaaaaaaacataagaagaaaaacaaa
aagagaagacacaagtctgattcaccagaatctgatactgaacgagaaaaggataaaaaa
gaaaaagagagagagaatgaaaaggatagacctagacaaagatcggaatcaaagcataaa
tctcctcctaaaaaacggcctggaaaagattctggtaattgggatacatctggcagtgaa
ctgagcgaaggggaattagaaaaacagagaagaaccctcttggaacaactggatgaagat
caataa
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