Natator depressus (flatback sea turtle): 141995980
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Entry
141995980 CDS
T11397
Symbol
ITGA6
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds04382
Cornified envelope formation
nds04510
Focal adhesion
nds04512
ECM-receptor interaction
nds04514
Cell adhesion molecule (CAM) interaction
nds04518
Integrin signaling
nds04810
Regulation of actin cytoskeleton
nds04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141995980 (ITGA6)
04514 Cell adhesion molecule (CAM) interaction
141995980 (ITGA6)
04518 Integrin signaling
141995980 (ITGA6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141995980 (ITGA6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141995980 (ITGA6)
04810 Regulation of actin cytoskeleton
141995980 (ITGA6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141995980 (ITGA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nds04147
]
141995980 (ITGA6)
04515 Cell adhesion molecules [BR:
nds04515
]
141995980 (ITGA6)
04090 CD molecules [BR:
nds04090
]
141995980 (ITGA6)
Exosome [BR:
nds04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141995980 (ITGA6)
Exosomal proteins of breast milk
141995980 (ITGA6)
Cell adhesion molecules [BR:
nds04515
]
Integrins
Integrin alpha subunits
141995980 (ITGA6)
CD molecules [BR:
nds04090
]
Proteins
141995980 (ITGA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
141995980
NCBI-ProteinID:
XP_074823692
LinkDB
All DBs
Position
11:40299491..40362451
Genome browser
AA seq
1138 aa
AA seq
DB search
MAPGKTLLYLSLFPCLASAFNLDTDNVILRKGEPGSLFGFSLAMHWQLQPQDKRLLLVGA
PREKAFPSQQANRTGGLYSCDITSPETLCTRVLFDENTDPATESKEDQWMGVTVQSQGPG
GKVVTCAHRYEKRQYVNTVQETRDIIGRCYLLSQDLTIKDPKDDESAMDGGEWSFCDGRL
RGHEKFGSCQQGVAATFTRDYHYVVFGAPGTYNWKGVVRAEQKNQTFYAVDIFDDGPYEV
GSESRRAENLVPVPANSYLGLLFLTSVSDTDPDQFVYKTLPPNVRVDKSTGVMMNSYLGF
SLDTGKGIVSQEETTFVSGAPRANHSGAVVLLKKDLQIPRTLSLVHIFEGEGLASSFGYD
VAVVDLNNDGWQDIVVGAPQYFDRYGEIGGAVYIYINQQGKWEGVKPIRLNGTTDSMFGI
AVENIGDINQDGFPDIAVGAPYDDFGKVFIYHGSKNGINTKPAQILDGKKSSVLYFGYSI
TGNMDLDRNSYPDIAVGSLSDSVSVYRSRPVISIKKTITISPDKIDLNRKTCFEPSGICM
DVEACFEYIANPTDFNQKIKLNYTFEAENDRRRLGLPSRVQFSKHPSDQLIGSITLGGRN
RKECVKTSLVMQENIKDKLRPIPVSVGVKISGSESSSPSKRRQGRSLPDLVPILNSNEPE
TVSSEVQFLKEGCGEDNICNSSLKLQYRFCTREGNEDRFAYLPIENNVPVLVLKDQRDIA
LEITVTNNPSDPKNLQKDGEDAHEAKLVATFPASLTYSAFRELRAYPEKQLTCGANQNGS
QAECELGNPFKRNSNVTFYLILSTTKVNVDTTHLDVNLKLETTSNQVNLAPITATAKVVI
ELLLSLTGVAKPSQVYFGGNVIGESAMKSEDDVGNIIEYEFRITNLGRPLKTFGTASLDI
QWPKEISSGKWLLYLMKVDSKELGKIPCEPQNEINSLGLEESHRSRRKREVAEKQTNDGK
KMSLFSERKYKTLDCNESARCVNIKCPLQGLDRRAMVVLRSRLWNSTFLEEYSKLNYLDI
LVRATISVPAAAENIKLTNEGAQVRVTVFPAKTVALYTGVPLWIILVAILAGILMLALLV
FLLWKCGFFQRSRYDDSVPRYHAVRIRKEERQTKDGEHKENLEKKQWITKWNENESYS
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgggaagacgctcctctacctgtccctcttcccctgcctcgcctccgccttc
aacctggacaccgacaatgtgatcctgcggaaaggggagccgggcagcctgttcggcttc
tccctggccatgcactggcagctgcagccgcaggacaagaggctattgctggttggagca
cctcgggagaaagcctttccatcccagcaagccaacagaactggagggttgtatagctgt
gacataacatccccagagacgctttgcactcgtgtcctctttgatgagaacactgatcca
gcaactgagagtaaagaagaccagtggatgggtgtaactgtccaaagtcaggggccagga
ggaaaagtggtgacatgtgcacatcgctatgagaaaaggcaatatgtaaacacagttcag
gaaactcgtgatatcattggaaggtgctacctgctgagtcaggatctcactattaaggat
cctaaggatgatgagtctgctatggatggtggagaatggagtttttgtgatggccgactg
aggggccatgagaaatttggttcatgtcagcaaggtgtagctgctacttttactagagac
taccattatgttgtatttggtgcaccaggaacttataactggaaaggggtggttcgtgca
gagcaaaagaatcaaacattttatgctgtggatatctttgatgatgggccttatgaagtt
ggtagtgagagtcgccgagctgagaatctagttcctgtgccagctaacagttatttaggt
cttctgtttttgacaagtgtgtctgatactgatcctgatcagtttgtatacaaaacattg
cctcccaatgtaagagtggacaaatccactggtgtgatgatgaatagctacctaggtttc
tctttggacactggtaaaggtatcgtttcccaagaagagacaacttttgtatcaggtgca
ccaagagccaatcacagtggagctgtagttctgctgaaaaaagatctccaaattcccaga
acactctcgcttgtgcatatatttgaaggagaagggctggcctcttcttttggctatgat
gttgcagtagtggacctcaacaatgatggttggcaagatattgttgttggagccccacag
tattttgaccgatatggagaaattgggggtgctgtgtacatctacattaaccaacaaggc
aaatgggaaggggtaaagccaattcgcctcaatggaaccactgattctatgtttggtatt
gcagttgaaaatattggtgatattaatcaggatggattcccagatattgccgtgggggca
ccatatgatgattttggcaaggtgttcatatatcacggatccaagaatggaataaataca
aagccagcacagattcttgatggcaaaaaatccagtgttctatattttggttattctatt
actggaaatatggatcttgatagaaactcctaccctgatattgctgttgggtcactttca
gattctgtctctgtttacagatctcggcctgttataagcattaagaaaaccatcacgata
tctcctgacaaaattgacctgaacagaaagacctgttttgaacccagtggaatctgcatg
gatgttgaagcatgttttgaatatattgctaaccccacggacttcaatcaaaaaataaaa
cttaactatacgtttgaagcagaaaatgacaggaggcggttaggcctgccgtctcgagtt
cagttttctaagcatccgtctgatcagttgattggaagtataactctaggaggacggaat
agaaaagaatgtgtgaaaacctctcttgtgatgcaggaaaatatcaaagataaactacgt
cccattcctgtatcagttggtgttaaaatcagcggttcagaatctagttcaccatcaaag
agaagacaaggaagatcacttccagatcttgttccaattctaaattcaaatgaaccagaa
acagtgagctcagaagtgcagttcttaaaagaaggatgtggagaagacaacatatgtaat
agcagcctaaaacttcaatacagattctgtaccagagaaggaaatgaagacagatttgct
tatttaccaattgagaacaatgttccggtgcttgtcctcaaagatcagagggatattgct
ctagaaataactgtgacaaataatccatcagatccaaaaaatctccaaaaagatggtgaa
gatgcccatgaagctaaactagttgcaacttttccagctagcttgacctactctgctttc
agagagctgagggcttatcctgaaaaacaattaacttgtggtgccaatcaaaatggttct
caagcagagtgtgaacttggaaatcctttcaagagaaattccaatgtaaccttttatctg
attttaagtacaactaaagttaatgttgacacaactcatttggatgttaatctgaagttg
gaaacaacaagcaatcaagttaatttggctccaattactgctactgctaaagtggttatt
gaattgcttttgtcactcactggagttgctaagccttcccaggtgtactttggaggtaac
gtaatcggtgagagtgctatgaaatctgaagatgatgttggaaacataatagaatatgaa
ttcagaataactaacttgggtagaccacttaaaacatttggcacagcttccttggacatc
cagtggccaaaagaaatcagcagtggcaaatggctactttatttgatgaaagtagactcc
aaagaattggggaaaatcccttgtgaacctcaaaatgaaataaactctttgggacttgag
gagtcccacaggtcaagaaggaaacgtgaagttgcagagaagcagactaatgatggcaaa
aaaatgtctctattttcagaaagaaaatataagaccctggactgtaatgagagtgcacgc
tgtgtgaatataaaatgtcccttgcaaggcttggacagaagggcaatggttgtattgcgt
tcaagattgtggaacagtactttcctagaggaatattctaagctgaactacttagatatt
ctcgttagggctacaatcagtgttcctgctgcagctgaaaacattaagctcacaaatgaa
ggtgctcaagtgcgagttactgtctttcctgcaaagacagtagcactttatacaggagtg
cctttgtggatcatcttggtggctattcttgctggaatactgatgctcgcactgttggtg
tttttactatggaagtgtggattcttccagcgctccaggtacgatgacagtgtcccccga
taccatgctgtaagaattcggaaagaggagcgacagaccaaagatggggaacataaagag
aatcttgagaaaaaacaatggattacaaaatggaatgaaaatgaaagctactcctag
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