Natator depressus (flatback sea turtle): 141996246
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Entry
141996246 CDS
T11397
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds04510
Focal adhesion
nds04512
ECM-receptor interaction
nds04518
Integrin signaling
nds04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141996246 (COL6A2)
04518 Integrin signaling
141996246 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141996246 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141996246 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nds04147
]
141996246 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
nds00536
]
141996246 (COL6A2)
Exosome [BR:
nds04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141996246 (COL6A2)
Glycosaminoglycan binding proteins [BR:
nds00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141996246 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
141996246 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141996246
NCBI-ProteinID:
XP_074824310
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Position
11:complement(76820881..76871058)
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AA seq
1029 aa
AA seq
DB search
MRSGLAEMSQPAFFAVLLCMTLVPLQAQFDEDEYTAFSPRPTACPEKTDCPINVYFIIDT
SESIALQTVPIPSLVEHMKQFIHAFISKLETEVYQNQVSITWNFWGLHFSDLVKIYSNLT
NSKDVYLAKLNAINYIGRGTFTDCAISEMTKQIMSHAVPAVKFAVVITDGHVTGSPCGGM
KMQAEKARDAGIKLFAVAPSQNIFEPGLREIANLPHELYRNNYATTKRGAIEVDEDTIDR
IIQVMKHEAYGECYKMSCLEITGPPGPKGYRGQKGAKGNMGQPGGPGLKGRQGDPGIEGP
IGYPGPKGIPGLKGEKGEFGGDGRKGAAGLAGRNGTHGQKGRLGRIGSPGCKGDPGDKGP
DGYPGDAGDQGEPGDEGIKGDPGRPGRSGPVGSPGEKGNRGPKGNNGAPGSPGAKGGKGS
PGPAGPKGEPGRRGDPGTKGSPGNAGTKGEKGDPGPEGPRGLAGEVGSKGARGDRGVLGP
RGPQGAVGEPGRPGSRGDPGDMGTRGNPGPPGPKGDRGRPGFSYPGPRGLGGDKGEKGPP
GPEGGRGDFGPKGAPGVKGDTGEPGDPGPSGEPGPRGSPGPKGIEGDPGPPGDPGLTDCD
VMTYVRETCGCCDCEKRCGALDIVFVIDSSESIGYTNFSLEKNFVINVVSRLGSIAKDPK
SETGARVGVVQYSHEGTFEAIQLNDERINSLSNFKEAVKRLEWIAGGTWTPSALQFAYNK
LIKESRREKARVFAVVVTDGRHDPRDDDNNLQAFCQGDVIVNAIGIGDMFNQPDQDETLR
SIACNEQQRVQKMRLFSELVAEEFIDNMEDVLCPDPQIVCPELPCQTELAVAQCTQRPVD
IVFLLDGSERTGEVNFHRAHNFVEEVSRRLTLARGDNDNMNARIALLQYGSEEEQVVLFP
LTYNLTYISEALSTIKYLDSSSNIGSAIIHAINNIVISPQNGQRAARRNAELSFVFITDG
ITGSKNLNEAINSMKKQDVMPTVVALGSDVDMDVLLKIGLGDRAAIFREKDYASLSQPGF
FDRFIRWIC
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtggcctggccgagatgtcccagccggccttttttgccgttcttctttgcatg
acgctggttcccctccaggctcagtttgatgaggacgagtacacagccttcagtcctcgc
ccaactgcctgtccagagaagaccgactgccccatcaacgtgtactttatcattgacacc
tcggaaagcattgccctgcagactgtgccgatcccgagcctggtggagcatatgaagcag
ttcatccacgccttcatcagtaaactggagaccgaggtctaccagaaccaggtctccatc
acatggaatttctggggacttcacttctcagacttggtgaagatttacagcaacttgacc
aacagcaaggacgtgtacctcgccaagctgaatgccatcaactacattggtcggggcacg
ttcacagactgcgcgatctccgaaatgaccaagcagatcatgagccacgcagtccctgcc
gtaaaatttgctgtggtcatcaccgacggccatgtgacaggcagcccctgtggcgggatg
aagatgcaggccgagaaggcccgggatgcagggatcaagctctttgcagtggcccccagc
cagaacatcttcgagccgggtctccgggagatcgccaacctcccccacgagctgtaccgc
aataactatgccaccaccaagagaggtgccatcgaggtggacgaggacaccatcgaccgg
attatccaagtcatgaaacacgaagcctatggagagtgctacaagatgagctgtctggag
atcacaggcccgcctggacccaagggctaccgggggcagaagggtgcgaaggggaacatg
ggtcaaccaggaggtcctgggctaaaagggcgacagggtgacccaggtattgaaggtccc
atcggataccctggtcccaagggtattcctggtctgaaaggagagaagggcgagtttgga
ggcgacggccggaagggggcagctggtttggcaggaaggaacggcacccatggacagaag
ggcaggctgggacggattggatcccctggctgtaagggagaccctggggacaagggccct
gatggttacccaggagatgcaggagaccaaggagaaccaggagacgaaggcataaaggga
gatcctggccgccctggccgcagcggacccgtgggatctccaggagaaaagggaaaccgg
ggacctaaagggaacaacggagcccctgggagccctggtgccaagggaggcaaaggcagc
ccaggacctgctggacccaagggagagccgggtcgtcgcggggacccagggacaaaaggc
agcccggggaacgctgggaccaagggagagaagggagaccccggccccgaaggcccccgg
ggcctagcaggagaagtcggcagcaaaggagcaaggggcgatcgaggagtgctggggccc
cgaggcccgcagggtgccgtgggagagccgggtaggcctggatctcgtggggacccgggc
gacatgggcacaaggggcaacccagggcccccaggaccaaagggagaccgaggcagacct
ggcttcagctaccctggccccagaggacttgggggcgacaaaggcgagaagggaccgcct
ggtccagagggtggaaggggcgactttggaccgaaaggcgctcccggggtgaaaggagac
acaggggaacctggtgaccccggcccatctggcgagcctggccccagaggcagcccaggc
ccaaagggcatcgagggtgatccgggcccacccggagatcctggcctaaccgactgcgat
gtgatgacctatgtgagagaaacctgcggctgctgcgactgcgagaagcgctgcggtgcc
ctggacatcgtgtttgtcatagacagctccgaaagcatcggctacaccaacttctccctg
gagaagaactttgtcatcaacgtggtgagccgcctgggctccattgccaaggaccccaag
tcagagacaggtgcccgggtcggggtggtgcagtacagccatgaggggacattcgaggcc
atccagctcaacgacgagcgcattaactcgctgtccaacttcaaggaggcggtgaagcgt
ctggagtggatcgctgggggcacctggacaccctccgccctgcagtttgcctacaacaag
ctcatcaaggagagtaggcgagagaaagcccgtgtgtttgccgtggtggtgacagacggg
cgccacgatccgcgggacgacgacaacaacctccaggccttctgccagggagacgtgatc
gtcaacgccatcggcatcggagacatgttcaaccagccagaccaggacgagaccctgcgc
tccattgcgtgcaacgagcagcagcgcgtccagaaaatgaggctcttctcggagctggtg
gctgaggaattcattgacaacatggaggacgtcctctgcccagatccacagatcgtctgc
ccagaactgccctgccaaacagagctggcggtggcgcagtgcacacagcgccctgtggac
atcgtcttcctgctggatggctcagaacgaaccggagaggtgaacttccacagggcccac
aacttcgtggaggaggtgtcccgccgcctcacgctggccaggggtgacaatgacaacatg
aatgcacggatcgccctcctacagtatggcagcgaagaagagcaggtggtgctcttcccc
ctgacgtacaacctgacctacatctcagaggccctgtccacgatcaagtacctggactcc
tcctccaacattggctctgccatcatccatgccatcaacaacatcgtcatcagcccgcag
aacgggcagagggctgcccggcgcaacgccgagctctccttcgtcttcatcaccgacggc
atcacgggcagcaagaatctcaacgaggccatcaactccatgaagaagcaggacgtcatg
cccacagtggtggccctcgggagtgatgtggacatggatgtcctgctgaagattggccta
ggggaccgagctgccatcttccgggagaaggactatgccagcctctcccaacctggcttc
ttcgacaggttcattcggtggatctgttag
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