Natator depressus (flatback sea turtle): 141996389
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Entry
141996389 CDS
T11397
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
nds Natator depressus (flatback sea turtle)
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nds04121
]
141996389 (RFWD3)
Enzymes [BR:
nds01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141996389 (RFWD3)
Ubiquitin system [BR:
nds04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141996389 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
zf-C3HC4
WD40_CDC20-Fz
zf-C3HC4_2
Beta-prop_THOC3
Beta-prop_WDR3_1st
zf-RING_UBOX
WDR55
EIF3I
Beta-prop_EML_2
zf-rbx1
Beta-prop_RIG_2nd
Rtf2
WD40_2
zf-RING_11
zf-ANAPC11
Beta-prop_WDR36-Utp21_1st
zf-C3HC4_4
Myo5a
WD40_Prp19
zf-RING_Vps41
CALCOCO1
DUF7837
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
141996389
NCBI-ProteinID:
XP_074824418
LinkDB
All DBs
Position
12:1757893..1821618
Genome browser
AA seq
738 aa
AA seq
DB search
MAQEEMEVDLQPAVTYSVEHHEAFPTEASGHALLSLPSNSPVPSDEAESIVVPPADEEVI
VVSGADEVVTVAESNPQLHAAPSLDGLQRLHGVLELFRLQAAQQITRQPPTRRTRRRRRG
GGSQRTISTRPRAPLDSYFMVSRTQGSTTAASPPLETLHLPVGNSGHSSEETLELSDSDS
SSSTEEEDVAVPREAAPIAASLGVSDQVPPEHEGRDAEEAEVQHKQRTPLKKPDVTVPTV
PLDEEEGDTCAICFEQWTNAGEHRLSALRCGHLFGYTCIVRWLKGQAGKCPQCNKKAKRS
DVVVLYARTLKALDTSEQERMKSSLEKEQLLRRQAELESAQSRLQLQVLTDECSKLRKQV
QELKALMAQHSTSASQQPGSSRSCFPGCVSSSQSQHKYHFEKAFLVSQSGSCRVMAYCDS
LSCLVVSQPSPQATLIPGCGFKMISAANLKSSQYIPIHSKQIRGLAFSNRTDGLLLSAAL
DHTLKLTSLTTNTVVQTYNAGRPVWSCCWCLDDTNYIYAGLVNGSILVYDLRDTSSHVQE
LAPQKSRCPVVSLSYLPRMASTTLPYGGVIAGTLEGGCFWEQKATNSYRPHHLPLEPGGC
IDIQTEISTRHCLATYRPNKSNNCLHCVVMELSCSQLTDASVDMVCSCHPVQTFSAGPTC
KLLTKNAIFQSPEEDGSILVCAGDEASNSAMVWDAGSGSLLQKLQTDLPVLDICPFTVNR
NNFLATLTEKVVKLYKWD
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggaagaaatggaagtggatctccagccagcagttacttattctgtggagcac
catgaggcatttcccacagaggcctccggtcatgctctactgtcactgccatccaactct
ccagtgcctagtgatgaggcagaaagcattgtggtgcctcctgctgatgaagaagtcatt
gtggtctccggtgctgatgaagtagtgacagttgctgagtctaacccccagttgcacgct
gcccctagcctggatgggctgcagaggctgcatggggtattggagctgtttcgactacag
gctgcacaacagatcacacgacagccaccaacaaggagaactcgccggcgacgaagaggt
ggtggatcccagaggacaatcagtaccaggcccagggcaccactggatagttatttcatg
gtcagcaggacccaaggatcaaccacagcagcatctccaccactggagactttgcatctt
ccagttggcaacagtggtcacagttcagaggagaccttggagctgagcgactctgacagc
agcagctccactgaggaggaggatgtggcagtaccccgggaggcggcacccatagctgcc
agtttgggagtttctgatcaggtcccaccagagcatgaaggtcgtgatgctgaagaagca
gaagtccagcacaaacagagaactcctctaaagaaacctgatgtgacagttcccactgta
ccactggatgaggaagaaggggacacctgtgccatctgctttgagcaatggactaatgct
ggggagcaccggctctcagcattgcggtgtggacacctgtttggatacacttgcatcgta
aggtggcttaagggacaggcaggaaaatgccctcagtgcaataagaaggcaaagcgctcg
gacgttgtggtcctgtatgcccgtactttgaaagcactggacactagcgaacaggagcgc
atgaaaagctctttagaaaaggagcagttgttgcggagacaggcggaattggaatccgca
cagagccgtctccagttgcaggtcttgacagatgaatgcagtaaacttcgcaagcaggtc
caggagctgaaagcactgatggcccagcacagcactagcgcctctcagcaacctggcagc
tcccgttcctgtttcccaggctgtgtctcctccagtcagagccagcacaaataccacttt
gagaaggccttcctggtttctcagtcagggagctgccgggttatggcttactgtgactca
ctgagctgtcttgtggtgtcacagccctctccgcaggctacacttattcctggttgtggc
tttaagatgataagtgctgccaacctgaagagcagtcagtacattcccatccacagtaag
cagatccggggactggccttcagtaatcggacagatggcttgctgctgtctgctgctttg
gaccatacgctcaaacttaccagtttgacaacaaatactgtggtccagacatacaatgcc
ggccgccctgtctggagctgctgctggtgccttgatgataccaactatatctatgctggg
cttgtcaatggctctatcctggtgtatgatctaagggacacaagctctcatgtccaggaa
ctagcccctcagaagtccaggtgtcctgtggtgtccctgtcctacctgccccgaatggcc
tccaccacactgccatacggtggggtaatagctgggaccttagaaggaggctgcttttgg
gaacagaaggccaccaactcctaccggcctcaccatctgcctctagagcctggaggctgc
atcgatattcagactgaaatcagcactcggcactgccttgcaacttacaggcctaataag
agcaacaattgcctgcattgtgtggtgatggaactgtcctgtagccaactgacggatgca
tctgtcgacatggtctgctcctgtcacccagttcagacattcagtgctgggcccacctgc
aaactgctgaccaaaaatgccatctttcagagtccagaagaggatggcagcatcttggtg
tgcgctggcgatgaggcctcaaactctgccatggtttgggatgctggaagtggctcctta
ctgcagaagctacaaactgacctacctgtgctggacatctgccctttcacggtgaaccgc
aataacttcctggccactctcactgagaaggtggtgaagctctacaagtgggattga
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