Natator depressus (flatback sea turtle): 141996424
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Entry
141996424 CDS
T11397
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141996424 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nds03019
]
141996424 (EDC4)
Messenger RNA biogenesis [BR:
nds03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141996424 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
141996424 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141996424
NCBI-ProteinID:
XP_074824493
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Position
12:4832738..4891409
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AA seq
1421 aa
AA seq
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MASASIDIEDATQHLRDILKLDRPAGSVNENQRPPNSYNGDLNGLLVPDPVAAGDGAPLA
KPMLRTVPLGTLQEKQVICLSGDDSSTCVVISAKDVEIVASSDSSITSKARGSNKVKIQP
VARYDWEQKYYYGNLIAVSNSYLAYAIRGASNGSAMVRVLSISTAERTLLKGFTGGVADL
AFAHLNSNQLACLDEAGNLFVWCLAMDNGKIQEEILVNIKRPEGTPLNSFRRIIWCPFIP
DENEESGEEGSQTLALLHEDRAEVWDLDIIRANNSSWPVEVTNIKEGFIVVKGHSTCLSE
GALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDP
EVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSKSVPPSLKACLDLSAEFLI
LSDVQRKVLYVMELLQNQEEGRAYFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEE
ESDSLSTEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMAAPIPPHGSHE
DFAFPDHLADLGAEGLGSEKGSVHGSQPDLRRIADLPVPADFLALSNDAKPKLMTPDAFM
TPSTSLQQIAVSPGSSVSSLTAVTAMSSASVNDPTVPRPSEDLTLSPKMQLDTSLTLSSS
SSSLQTSPRNHSVLIPGLSDKLTPKAPVPVTPANPPLALELQEVEPLVVAQASPTRERSP
DVISSASTAMSQDIPEIASETLQRSFATAPAGLPAEVLEPNHHADSMASAASALHLLSPR
NRHSSEHSQHSLDMAPVEVDRLTTPSLLETALTQENASSNSVVSQPWPAAPDITRETRNS
IADSPRDDVAEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFSAKASA
QRLPVKDWKAKVSPRASPKLKRKGKKDDGDVTQSPRSCDRQYRCSGQWSQSVSFGCLVCK
QVTAECQDELMSLLRSQQRELTELRQNQMELMQRLTDHLDAVQSSLMGHMERVIDSQQEQ
EQRRLDRALTEGQQRNGQLQEHLSQQLSQSLSTAACNRLERTIREEMKKTVPQYISKSLD
PVTGQLSNTIAAKLTAVEGTLKENITKLVKSKNLTDAVARAAADALQGPIQSAYKEAFQS
VVLPAFEKSCQSMFQQINDTFKQGTQEYIQQLETHMKNKKARDQEARDSMLGQLRQLIST
FQSSTDQLASTITTSVHTEVQHQLHVIVGNMQDSILTQVQRVIKGEVSLAMKEQQAAVTS
SIVQAMRSAAGTPIPSAHLDFQSQQTHVLQLLQQGHLNQAFQQTLTAADLNLVLYVCETV
DPQQVFGQHPCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGS
VMNQVRQKLFQFLQAESHSTLSKPARRLMIMLQGLVTPSMT
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgccagcatcgacatcgaggacgcgacccagcacctgagggacatcctcaag
ctggaccggccggcgggttcagtgaacgaaaaccaaaggccacccaactcgtacaacggg
gacttgaatgggctgctggtgccagaccccgttgcagctggagatggagctcccctggct
aaaccaatgctccgaactgttcctctgggaaccctgcaagagaagcaagtcatctgcctt
tctggagatgacagctccacctgtgtggtgatatcggcaaaagacgtggagattgtggcc
agcagtgactctagcatcaccagtaaggccagagggagcaacaaggtaaaaatacagcca
gtagccaggtatgactgggagcagaaatactactatgggaacctgatagctgtatcaaac
tcctacctggcatatgccattagaggtgccagtaatggctctgctatggtgcgggtactg
agcatcagcactgccgagcggaccttgctgaaaggattcacgggaggcgtggcagacctg
gctttcgcccatctcaactccaaccagctggcctgcctcgatgaggctggcaacctcttt
gtctggtgcctggccatggacaatgggaaaatccaagaggagatcttggtgaacataaaa
cgacctgagggcaccccgctgaacagcttccggagaatcatatggtgccccttcatccca
gacgagaatgaggagagcggtgaagagggcagccaaacgttggcattgctgcatgaggac
agggcagaggtttgggatctggatattatccgagccaacaacagttcctggccggtggag
gtgactaacatcaaagagggcttcattgtggtgaaaggccacagcacgtgcctgagcgag
ggagcgctctctccagatgggacggttttggccacagcaagccacgatggctatgtcaaa
ttctggcagatctacatagagggccaagatgagccaaggtgcctgcatgaatggaagcct
catgacggcaggccgctctcctgcctgctcttctgtgataatcacaaaaaacaagaccca
gaggttcctttctggagatttctcatcactggagcagatcagaaccgagagctgaagatg
tggtgcaccgtttcttggacctgtctgcaaactgtccgcttttcccctgacatcttcagt
tccaagagtgttcccccgagtctgaaagcctgcctggacctctctgctgaattcctgatc
ctgagtgacgtgcagagaaaagtcctgtacgtgatggagcttttgcagaaccaggaggag
ggcagagcttacttcagctccatctcggagttcctcctcacccacccggtcctgagcttc
ggcatccaggtagtgagccgctgccggctgcggcacacagaggtcctcccagctgaagag
gaaagcgacagcctgagcacagaaggtgctcagggggctggggctgtcgaatcggccgca
ggtgtgctgatcaagctcttctgcgtccacaccaaggccctgcaggatgtgcagatcaga
tttcaacctcttcatagtccagatatggctgcaccgatccctccccatggctcccatgaa
gatttcgcgtttccagaccacctggctgacctgggcgcagaagggctgggatcggagaag
ggctccgtacatggctcccaaccagacttacggcgcattgcagacctgcccgtgccagcg
gattttcttgccctctccaatgatgccaaacccaagctgatgaccccagatgcgttcatg
accccaagcacatctcttcagcagattgccgtgtcgccgggaagcagcgtcagttccctg
actgcagtcacagccatgagcagcgcttctgtcaatgaccccactgtgcccaggccatct
gaagacctgactttgagcccaaagatgcagctggacaccagcctcacgctgagcagcagt
agcagcagtctccagacgagtcctaggaaccattccgtccttatccctggactctctgac
aagctgaccccaaaggcgcctgtcccggtcactccagcaaacccccctctggctctggag
ctgcaggaagtggagccccttgtggtagcccaggcctcacccacccgggagcgctccccc
gatgtcatttcctcggcctccacagccatgtcccaggatatcccagagatcgcctctgag
acgctgcagcgcagctttgccacagccccagccgggctccctgcagaggtgctggagccc
aatcaccatgcggacagcatggcctcagctgcgtcggccttgcacttgctgtccccgagg
aaccggcacagctccgagcacagccagcactccctggacatggcccccgtggaggtggac
agattgaccacaccctcgttactggagactgctttaactcaggaaaatgcatcttccaac
agcgtcgtgagccagccatggccagcagcccccgacatcaccagggaaaccaggaacagc
atagcagacagcccaagggatgacgttgcagagaagcacaagagctcttcctatcacagg
cacagctaccacctgctgcagcatgacagccaggatgccagcgcagagcaaagtgaccat
gatgatgaagttgcaagtttggcttctacatcaggcgggtttagtgccaaagcatctgca
cagaggctgcctgtgaaggactggaaagccaaggtgtcccctcgggcttcccccaagctc
aaacggaagggcaagaaagacgacggggatgtgacccagtccccaagatcatgtgatcgc
cagtacaggtgcagtggccagtggagtcagagcgtatcatttggctgccttgtctgcaaa
caggtgactgccgagtgccaggatgagctgatgtctctgctgcggagccaacagagggag
ctcacagagctgagacagaaccagatggaactaatgcagagacttactgaccacctggat
gctgtgcagagctccctcatgggtcacatggaacgagtgattgattctcagcaagaacaa
gagcagcggaggctggaccgagctctgaccgaggggcagcagcggaacgggcagctccag
gagcacctgtcccagcagctgtcgcagtccctctccactgctgcatgcaatcgcctggag
aggaccatccgcgaggagatgaagaagacggtgccccagtacatttccaagagcctggac
cctgtcactggccagctgagcaatacgattgccgccaagctcaccgctgtcgaggggaca
ttgaaggaaaacatcaccaagctagtgaaatcaaagaacctgacagatgccgttgcgagg
gcagcggcggatgctctgcaggggcccatccagtcggcgtacaaggaggcgttccagagc
gttgtgttgccagcgtttgagaagagctgccagtccatgttccagcaaatcaacgacacc
ttcaagcaggggacgcaggaatatatccagcagcttgagactcacatgaagaacaagaag
gcgcgagaccaggaggcccgggactccatgctgggccagctccggcagctgatcagcacc
ttccagagcagcacagatcagctggcctccaccatcactaccagcgtgcacaccgaagtg
cagcatcagctgcatgtcattgtgggcaacatgcaggactctattctgacccaggtgcag
agggttatcaagggagaggtgagcctggccatgaaggagcagcaagcggccgtcacctcg
agcattgtgcaggcgatgcgctccgcagcaggcacgcccatcccctctgctcacctggac
ttccagtctcagcagactcacgtcctgcagctgctgcagcagggccacctcaaccaggct
ttccagcagactctcacagcagctgatctgaacctggtcctatatgtctgtgagacggtg
gatcctcagcaggtgtttggacagcacccatgtccactctcccagcccgtcctcctgtct
ctcattcagcagctctcctcggatctgggcacccgcaccgaactgaaactgaattacctg
gaggaggcggtgatgcacctggaccacagcgaccccatcacccgagaccacatgggatcg
gtcatgaaccaggtgcggcagaagctcttccagttcctgcaggcggaatctcacagcacc
ctgagcaagccggcccgccgcctcatgatcatgcttcagggcttggtcacccccagcatg
acctaa
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