Natator depressus (flatback sea turtle): 141997362
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Entry
141997362 CDS
T11397
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141997362 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nds03021
]
141997362 (TAF4)
03036 Chromosome and associated proteins [BR:
nds03036
]
141997362 (TAF4)
Transcription machinery [BR:
nds03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141997362 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
141997362 (TAF4)
Chromosome and associated proteins [BR:
nds03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
141997362 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
141997362
NCBI-ProteinID:
XP_074825795
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All DBs
Position
13:8720480..8786517
Genome browser
AA seq
1102 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANVQTESSSSSSKMGLSAPEITKAGAGGVQGGVINHNT
RSQSSALDGVTTTSTTTTTAAAGGSEAAAAPGTLSQGKSVVISTMATALSTRNGKIGTTT
VQTLNGSNVVMNSHHSGSAAFSGTPATANPAAAPAVAPLVNNGPGSVGKGNTVNAVLPSA
SNTVIQTSFLSTAVSSASSPSPTVISSQPPPSIVGGGPTVALVRPPIHTAGPTVAAAAAA
TQNGSNTVINSAIGVGSFPAVAAVTVGSGVSLQTSLVNSQPGSSVPATPTTQVIKSESPK
TIGHAVSQQQTLVASGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAKGT
ASTVAQSLPRTPTATTSGIRATLTPTVLAPRLPQAPQNPTNIQNFQLPPGMVLVRSENGQ
LLMIPQQALAQMQAQAQAHAQSQPQNTMTPRPATPTSAPPVQISTVPAPGTPIIARQVTP
TTIIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTALGTATAVQTGTQRTVQGATA
TSTAATETMENVKKCKNFLSTLIKLASSGKQSSETTANVKELVQNLLDGKIEAEDFTSRL
YRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATTALTAVMLSSSVQ
RTAGKATATVTSTLQQPVISLTQPTQVGVGKQGQPTPLVIQQSQKGGALIRPPQVTLTQT
PMVALRQPHNRIMLTAPQQIQLNQLQTVPVVKPTVLPGNKALSTVSPQAAAAQKNKLKEP
GGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLLPASLQRRIL
EIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKVSETAQQKNVSYKDDERYEQASDVRAQ
LKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRD
ANLTALAAIGPRKKRKVDSPGSGSGTEGSSTNTPVPGSSGVGTTRPFTRQRITRVNLRDL
IFCLENERETSHSLLLYKAFLK
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggtcatcaccac
cagcaccacaaggcgcaggagcccctcagggccgctggggggctgctggggaaccatgtt
gtgagcagcagtagcagcagcagcagccctagccctagccctggaggagtagtagtagga
ggcaatgctaatgtccaaacagagagcagcagcagcagcagcaagatgggactcagtgcc
ccagagatcacaaaagcaggagctggaggagtgcaagggggcgttattaatcataacacc
aggtcccagagttcagctctggatggagtcactacaaccagcaccaccaccaccacagca
gcagcaggaggatctgaagctgctgctgctccagggaccctcagtcagggcaaatcagtg
gttatcagtaccatggcaactgccttatccaccaggaatggcaaaattgggaccacaacg
gtgcaaactttgaatgggagtaacgtggtgatgaactctcatcattcgggaagtgctgct
ttctctgggactcctgcaactgctaatcctgctgctgcacctgctgttgcccctctagtt
aacaatggacctggatctgtggggaaaggaaatacagttaatgctgttttgccatccgct
tctaacactgtcatccagacttctttcctcagcactgctgtgtcctctgcctcatcccca
tcacccacagtaatctcttcgcaaccgccaccaagcattgtaggtggggggcctactgta
gcactggtgaggccaccaattcacacagcaggacccacggttgctgcagctgctgcagcc
acccagaacgggagcaatactgtgatcaattcagccattggtgtggggagttttcctgct
gttgctgcagtcactgtgggttctggagtttccctccaaacatcacttgtgaacagccag
cctggttccagtgtgccggcaacacccaccacacaggtcatcaaatcagagtctcctaaa
actatagggcatgcagtatcccagcagcagacactagttgctagtggccagcccagtact
acagggggtaacatgataattgggcaaactatgcaagctgggctctccaatgtggccccc
aatcccggtgggatacctcctgcagctcctggtacccctacaggaatggctaagggcact
gccagtacagtggcacaaagtctgccaaggactccaacagcaactacaagtggtatcaga
gcaactttgactcctacagttttagcacctcgtctgcctcaggcacctcagaatccaact
aatattcagaactttcagttaccaccaggcatggtccttgtgcgtagcgaaaatggacag
ttactgatgatccctcaacaagccttggcacaaatgcaggcgcaggcacaggcacatgcc
caatcccagccccaaaataccatgactcctcgtcctgcaacacctaccagtgcaccacct
gtacagatatcaacagtgccggctcctggaacgcctataattgcacggcaggtgacacca
actactataatcaagcaggtgtctcaggctcagacaactgtacagcccacaacaacgtta
cagcgtcctcctgtagtgcagcctcagattgttctgggtggtaccgcacaaacaactgca
ttaggtacagccacagctgtacagactggaactcagagaactgtgcaaggagcaacagca
acctctactgctgccacagaaactatggagaatgtgaagaaatgcaagaattttctatcc
acattaataaaactggcttcatctggaaaacagtcttcagagactacagctaacgtgaaa
gagctagtacaaaacttgttggatggaaaaattgaagcagaagattttaccagcaggctg
taccgagaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagttta
cctgccttgagacagttaaccccagactcggcagctttcattcagcaaagtcaacagcag
cagcccacaacgcaagcaacaactgcgctgacagcagtgatgctgagcagctcagttcag
cgcacagcggggaaggccactgccactgtaacaagtactctccaacagcctgtaattagt
ctaactcagcctacgcaagttggggttggcaaacaagggcaacctacaccactggttatc
caacagtctcaaaaaggaggggcattgataaggcctccacaggtaacgttgacacaaacc
cctatggtagcattgcggcaaccacataatcgtattatgcttacagctcctcaacaaatt
caactgaaccaacttcagacagtacctgtggtaaagccaacagtattacctggaaacaaa
gctctgtccactgtttcaccacaagcagctgccgctcaaaagaataaactgaaagaacct
gggggaggttcttttagggatgatgatgatattaatgatgttgcatcaatggctggagtc
aacctatcagaagagagtgcacggatattggcaacaaattctgagttagtgggcacatta
acaaggtcctgtaaagatgaaaccttcctacttccagcatctttgcaaagaaggatacta
gaaataggtaaaaaacatggaataacggaaatccatcctgatgtagttagctatgtatca
catgcaacacaacaaaggttacaaaaccttgtagaaaaagtatcggagactgcccaacaa
aagaatgtttcttataaggatgatgaaagatatgagcaagcaagtgatgttcgggcacag
ctcaagttctttgaacaactagatcaaatagaaaaacagagaaaagatgaacaagaaagg
gaaattttaatgcgtgcagcaaagtctcggtctagacaagaagacccagaacagctaagg
ttgaaacagaaggccaaggagatgcagcaacaagagctagcacaaatgagacagagggat
gccaacttaaccgcattagctgcgattggtcctagaaagaaaagaaaagtggattctcca
ggatctggatcagggacagaggggtccagtacaaatacaccagtcccaggcagctctgga
gttggaacaaccagaccatttacgcgacaaaggataacgcgggtgaacctcagggacctc
atattttgtttagaaaatgagcgagagacaagccattcactattgctatacaaagcattc
cttaagtaa
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