Natator depressus (flatback sea turtle): 141998187
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Entry
141998187 CDS
T11397
Symbol
SKIC2
Name
(RefSeq) superkiller complex protein 2
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141998187 (SKIC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nds03019
]
141998187 (SKIC2)
Enzymes [BR:
nds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
141998187 (SKIC2)
Messenger RNA biogenesis [BR:
nds03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
141998187 (SKIC2)
mRNA degradation factors
3'-5' decay
Ski complex
141998187 (SKIC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
MTR4_beta-barrel
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
DUF3516
Motif
Other DBs
NCBI-GeneID:
141998187
NCBI-ProteinID:
XP_074826950
LinkDB
All DBs
Position
14:complement(46947198..46965474)
Genome browser
AA seq
1261 aa
AA seq
DB search
MERMKLPPRGPMELPLSMLEVGCAGRFELLTHPEGPDGDTFPLSTLPHGLPPYALDLASE
LERRFLASPEWLPPHSFERAHRVWPREKDIWSLLETAPTPVHSTLQTERDPTTGQILAFR
EAPLDNMGLSAKNSLSFQRAPGPPAQALRGSSTNYPFWPGGMDEPSMEQISAKGHLEEDI
DFESDLLTVPPGWKKGVEFKPQVLQASPGLLPLSGLLGALDSFELGGSSEEEEEEKRKTK
AKGPGGKEGDTPPAPTPAMQRADSLEELVLKEVTPGPPPPAQAVPPQPPKEQWAIPVDIS
SPVDDFYKRIPDPAFRWPFEPDVFQKQAILHLEKHDSVFVAAHTSAGKTVVAEYAIALAQ
KHMTRTIYTSPIKALSNQKFRDFKNTFGDVGLLTGDVQLHPDASCLIMTTEILRSMLYNG
SDVIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPEHVNIILLSATVPNTLEFADWIGRI
KRKRIYVISTLRRPVPLEHHLYTGNSHKTQHELFLLLDARGTFLTKGYYAAVEAKKERSS
KHAQTFGAKQPTHMGTGPGQEKGVWLSLMDALRKRDQLPVVAFTFSRARCDDNASALTTL
DLTTSAEKSQVHLFFQKCLSRLKGSDRQLPQVLHMVDLLKRGIGVHHSGILPILKEVVEM
LFSKGLVKILFATETFAMGVNMPARTVVFDSIRKHDGSSFRDLLPGEYIQMAGRAGRRGL
DTTGMVIVLCKTRVPEMADLHRMMLGKPTQLQSQFRLTYTMILNLLRVEALRVEDMMKRS
FSEFPSRKDSQVHEHTIAQLSRRLAAMEEVDTSGQLSDLPEYGQAVQELQETRRMIQRRV
AESASGLKALAPGRVVIVNNPAHRNALGVILQVSSDTANRMFTTLVLCEKTPEGGTPGGD
TGGGSPTPEVPFPDDLLLNKLFLPEGPCGHAVEQLGPCDLAAITGKTLRVNAERILEDVK
KRQMPRFRSDPPGPSAVQAAQELLRLAEGGARGLPCLDPVGTLQLKELAVAEGAMRLRRL
EEALPGFQCVQSPRFPQQYLRLAERLRLRAELEHLRFLLSDQSLLLLPEYQQRVEVLRAL
RYVDAGGAVQLAGRVACEISNHELLLTELVFDNLLTELRPEESVALLSCLVCQTKGQAEP
QVPSVLRKGMERIRAVAERIALLQRECGLRESVEDFVAQYNFGLVEVVYEWARGMPFAEI
ARLTEVQEGIIVRCIQRLDETCRDVRNAARVIGEPTLHAKMEQASNLIKRDIVFAASLYT
Q
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggagaggatgaagctgcccccccgggggcccatggagctgcccctctccatgctggaa
gtgggctgcgccggacgcttcgaactcctcacccacccggaggggcccgatggggacacg
ttccccctctccacgctgccccatgggctgcccccctacgccctggacctggcctcggag
ctggagcggcgcttcctggccagccccgaatggctgcccccccacagcttcgagagggcc
cacagggtctggcctcgagagaaggacatctggtcgctgctggagacggcccccaccccc
gtgcactccacgctgcagacagagcgggaccccaccacggggcagatcctggccttcaga
gaggcgccgttggacaacatggggctgtcggccaagaactcgctctccttccagcgggcg
ccggggccccctgcccaggccctgcggggcagcagcaccaactaccccttctggccaggc
gggatggacgagcccagcatggagcagatcagcgccaaaggccacctggaggaggacatc
gacttcgagagcgacttgctgacggtgccgccgggctggaagaagggggtggagttcaag
ccacaagtgctccaggcttccccagggctgctgcccctgtccggcctgctgggggcgctg
gactccttcgagctgggcggctccagtgaggaggaggaggaggagaagaggaagacaaag
gccaaggggccaggggggaaggagggagacacccccccggcccccacccccgctatgcag
agggcagacagcctagaggagctggtgctgaaggaggtgacccctgggcctccgccgccc
gcccaggctgtgcctccacagccccccaaggagcaatgggcgattcccgtcgatatctct
tcacctgtggacgacttctacaaacgcatccctgacccagccttccggtggccgttcgag
ccggacgtgttccagaaacaggccatcctgcacctggagaaacacgactctgtcttcgtg
gccgcgcacacctcggcggggaagacggtggtggccgaatacgccatcgccctggcccag
aagcacatgaccaggaccatctacacctcccccatcaaggctctgtccaaccagaagttc
cgagatttcaagaacacctttggggacgtggggctgctgacgggagacgtccagctgcac
cccgatgcctcctgcctcatcatgaccaccgagatcctgcggtccatgctgtataacggc
tcagacgtgatccgggatctggagtgggtgatctttgacgaggttcattacatcaacgat
gcagagcgcggtgtggtgtgggaggaggtgctgatcatgctgccagagcacgtgaacatc
atcctgctcagcgccaccgtccccaacacgctggagttcgccgactggatcgggcggatc
aagaggaagcggatctacgtgatcagcaccctgcggcgcccggtgcccctcgagcaccat
ctctacacaggcaacagccacaagacccagcacgagctcttcctgctcctcgacgcccgc
ggcaccttcctcaccaaggggtactacgcggcggtggaggcgaagaaggagcgctccagc
aaacacgcccagaccttcggggccaagcagcccacgcacatgggcaccgggccgggccag
gagaagggcgtgtggctctcgctgatggacgcgctgcggaagcgggaccagctgcccgtg
gtggccttcaccttctcccgcgcccggtgcgacgacaacgcatccgcgctcaccaccctc
gacctgaccacgagcgccgagaagagccaggtccacctcttcttccagaaatgcctctcc
cgcctcaagggctccgaccgccagctgccccaggtgctgcacatggtggacctgctgaag
cggggcatcggggtgcaccacagcgggatcctgcccatcctcaaggaggtcgtggagatg
ctcttcagcaaggggctggtcaagatcctcttcgccaccgagacctttgccatgggggtg
aacatgccggcccgcaccgtggtcttcgactccatccgcaagcatgacggctccagcttc
cgcgacctgctgccaggcgagtacatccagatggcgggccgggccgggcgccgggggctg
gacaccacggggatggtcatcgtgctctgcaagacccgcgtgcccgagatggccgacctg
caccgcatgatgctggggaagccgacccagctgcagtcccagttccgcctgacctacacc
atgatcctgaacctgctgcgagtggaggccctgcgcgtggaggacatgatgaaacgcagc
ttctccgagttccccagccgcaaggacagccaggtgcacgaacacaccatcgcccagctg
agccgccggctggccgccatggaggaggtggacacgagtgggcagctcagcgacctgccg
gagtacggccaggccgtgcaggagctgcaggagacgcgccgcatgatccagaggcgggtg
gcagagtcggccagcgggctgaaggctctggccccgggtcgagtggtgatagtcaataac
ccggctcaccggaacgccctgggggtgatcttacaggtctcctcagacacggccaaccgg
atgttcaccaccctggtgctgtgtgagaagacccctgagggggggaccccaggaggggac
acaggagggggcagccccaccccagaggttcccttccctgacgacctgctgctcaacaag
ctcttcctgccggaagggccctgcggccacgccgtggagcagctgggcccctgcgacctg
gcggcgatcacgggcaagacgctgcgggtgaacgccgagcgcatcctggaggatgtcaaa
aagagacagatgccgcggttcaggagcgacccccccggcccctcggccgtgcaggcggcc
caggagctgctacggctggcggaggggggcgccagggggctgccctgcctggacccggtg
ggcacgctgcagctgaaggagctggccgtggcggagggcgccatgcggctccggcgcctg
gaggaggcgctgcccggcttccagtgcgtccagagcccccgcttcccccagcagtacctg
cggctggccgagcggctgcggctgcgggcggagctggaacacctgcgcttcctgctgtcg
gaccagtccctgctgctgctgccggagtatcagcaacgcgtggaggtgctgcgggcgctg
cgctacgtggacgcggggggcgcggtgcagctggccggacgcgtggcctgcgagatcagt
aaccacgagctgctgctgacggagctggtgttcgacaacctgctgacggagctgcggccg
gaggagagtgtggccctgctcagctgcctggtctgccagaccaagggccaggccgagccc
caggtgcccagcgtgctccgcaagggcatggagcggatccgggcggtggctgagcgcatt
gccctgctgcagcgggagtgcggcctgcgggagtcggtggaggatttcgtggcgcagtac
aacttcggcctggtggaggtggtgtacgagtgggcccgcggcatgcccttcgccgagatc
gcccggctgacggaggtgcaggaggggatcatcgtgcgctgcatccagcggctggacgag
acctgccgggacgtacgcaatgcggcccgggtcatcggggagcccacgctgcacgccaag
atggagcaggcctccaacctgatcaagagagacatcgtcttcgctgccagcctctacacc
cagtga
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