Natator depressus (flatback sea turtle): 141998327
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Entry
141998327 CDS
T11397
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03013
Nucleocytoplasmic transport
nds03015
mRNA surveillance pathway
nds03040
Spliceosome
nds05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141998327 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
141998327 (ALYREF)
03015 mRNA surveillance pathway
141998327 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141998327 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nds03019
]
141998327 (ALYREF)
03041 Spliceosome [BR:
nds03041
]
141998327 (ALYREF)
Messenger RNA biogenesis [BR:
nds03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
141998327 (ALYREF)
TREX complex
141998327 (ALYREF)
Spliceosome [BR:
nds03041
]
Complex C
Other components
EJC/TREX
141998327 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
141998327 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
F07F6_N
Motif
Other DBs
NCBI-GeneID:
141998327
NCBI-ProteinID:
XP_074827169
LinkDB
All DBs
Position
14:773523..783726
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AA seq
258 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGAGRAGGGRGGRGRGGAARGGGPGRGSVGAGRAGGGGPLR
NRPVMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMTRNRGGSGGFGGGGGNRRGNRGGNRGRGRGAGRSSKQQLS
AEELDAQLDAYNARMDTS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgatatcatcaagctgaaccgcagccagcgg
ggggccggtcgcgccggcggcggccgcggaggccggggccgcggaggcgccgcccgcgga
ggggggcccggccggggcagcgtcggagcggggcgagcgggcggcggcggccccctgcgg
aacaggccggtcatggcccgaggcggcggcaggaaccggcccgcgccctacagccggcca
aagcaactccccgaaaagtggcagcatgacctgttcgacagcggcttcggggctggggct
ggcgtggaaaccggggggaagctcctggtttctaatctggactttggtgtgtcggatgca
gatatccaggagctctttgcagagtttgggaccttgaagaaagcagcggtgcattatgat
cggtctggacgcagtttagggacagcagatgtgcattttgaaagaaaggcagatgctctg
aaagctatgaagcagtacaatggagtccccctggatgggcgccctatgaacattcagctg
gttacatcacagatagacacacagcggagaccagcacagagtgtaaacagaggaggcatg
accagaaaccgtggtggttcaggaggatttggtggtggaggtggcaacaggcgaggtaac
cgtggtgggaaccgagggagaggcagaggggctggaagaagttccaaacagcagctctct
gcagaagaactagatgcacagttggatgcttataatgccaggatggacaccagttaa
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