Natator depressus (flatback sea turtle): 141999808
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Entry
141999808 CDS
T11397
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds04020
Calcium signaling pathway
nds04080
Neuroactive ligand-receptor interaction
nds04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
141999808 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
141999808 (GRIN1)
04082 Neuroactive ligand signaling
141999808 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nds04040
]
141999808 (GRIN1)
Ion channels [BR:
nds04040
]
Ligand-gated channels
Glutamate (ionotropic)
141999808 (GRIN1)
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
141999808
NCBI-ProteinID:
XP_074829690
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All DBs
Position
16:5330798..5401635
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AA seq
963 aa
AA seq
DB search
MSTMRLLLLAVLVSFSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSNVWFEMMRVYNWNHIILIVSDDHEGRAAQKKL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSCKYTEGVTGRLE
FNEDGDRKFANYSIMNLQNRKLVQVGVYNGSHVLPNDRKIIWPGGETEKPAGYQMSTKLK
IVTIHQEPFVYVKATQADGTCKEEITINGDPVKKVFCTGPNETIPGRPTVSLCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDSKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQSSLSLVALGFSFRKGPEH
FFLVDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTQYHPTDITGQLNLSDPSVS
TVV
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgctgctcgccgtgctcgtctccttctccttcgcccgcgcc
ggctgcgaccccaagatcgtcaacatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcgccacggcacgtggaagatccagctg
aacgccacctcggtcacccacaagcccaacgccatccagatggccctgtccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcacccacctgctccaaatgat
cacctaacaccaacacctgtatcatacacagctggcttctacaggattcctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtccttcctgcgcact
gtcccgccatactctcaccagtccaatgtctggtttgagatgatgcgagtgtacaactgg
aatcacatcatactaatcgtcagtgatgaccacgagggccgtgctgcacagaagaagctg
gagacactcctggaagagagagaatccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagttcttcagtttgacccg
ggaaccaaaaatgtgacttcactgctgcttgaagcaaaggagctggaggctcgggttatc
atcctctctgcaagtgaggacgatgctgccacagtgtacagatcggcagccatgctcaat
atgacgggctcaggatacgtgtggctggtgggggagagagagatatctggcaatgccctg
cgatacgcccccgatggggtgattggtttgcagctcattaacgggaagaacgagtcagct
cacatcagcgatgctgtcgcagtggtagctcaggcagtccatgacttattcgagaaggag
aatatcacggaccccccgagaggctgcgttgggaacaccaacatctggaagactggccct
cttttcaagagagtgttgatgtcgtgcaagtacaccgagggtgtgaccgggagactggag
ttcaatgaagacggggacaggaaattcgccaattacagcatcatgaacctgcagaaccgg
aagctggttcaagttggggtttacaatggcagccatgtcctgcccaatgaccggaagatc
atctggccggggggagagacagagaaacctgcgggctatcagatgtcaaccaaattgaag
attgtgacaattcaccaagagccctttgtgtacgtgaaagcaacacaagccgatggaaca
tgtaaggaagaaattaccatcaatggagacccagtgaaaaaggtcttttgcactggaccc
aatgagaccatcccaggacgccccactgtgtcgctgtgctgctatggcttctgcatcgac
ctgctgatcagacttgcaggggtgatgaatttcacctacgaagttcacctggttgctgat
ggtaaatttggcacacaggagcgggtcaataacagcaataagaaggagtggaacgggatg
atgggggagctcctgagcggccaggcagacatgatcgtagcccccctcaccatcaataac
gagcgtgcgcagtacatcgaattctccaagcccttcaagtaccagggtctcaccatcctg
gtgaagaaggaaatcccccgcagcaccctcgactcgttcatgcagcctttccagagcacg
ctgtggctgctggtgggactctcagtgcatgtcgtggccgtgatgttgtatctcttagac
cggttcagcccgtttggccggttcaaagttaacagtgaggaagaggaggaagacgcactg
accctctcctcggccatgtggttctcttggggagtgctgctgaactctgggatcggagaa
ggtgctccccggagtttctctgctcgtatccttggcatggtgtgggctggctttgctatg
atcattgtggcttcctacactgccaacctggctgccttcctggtgttagacagacctgaa
gagagaatcacaggcattaacgaccccaggctgcggaacccctccgataagttcatctac
gccacggtgaagcagagctcggtggacatttacttccggcggcaggtggagctgagcacc
atgtaccggcacatggagaagcacaactacgagagcgctgccgaagccatccaggctgtc
agggacagcaagctccatgccttcatctgggattcagcagtgctggagtttgaagcctcc
cagaagtgtgacctggtgacaacaggggagcttttcttccgctctggctttgggattggg
atgcgcaaagacagcccatggaagcagaacgtctccctggccatcctcaaatcccatgag
aacggcttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtatttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataag
gatgcgcggaggaagcagatgcagctggcgtttgcggccgttaacgtgtggcggaaaaac
ctgcagtcctctctctctcttgtggcgctaggattcagcttcagaaaaggcccagagcat
ttttttttagtggatagaaaaagtggtagagcagaacctgaccctaaaaagaaagccact
tttaggtccatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagat
acgcagtatcatcccactgacatcaccgggcaactcaatctctccgacccctcagtcagc
actgtggtgtga
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