Natator depressus (flatback sea turtle): 141999900
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Entry
141999900 CDS
T11397
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds04510
Focal adhesion
nds04512
ECM-receptor interaction
nds04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141999900 (TNC)
04518 Integrin signaling
141999900 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141999900 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nds00536
]
141999900 (TNC)
Glycosaminoglycan binding proteins [BR:
nds00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141999900 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141999900
NCBI-ProteinID:
XP_074829863
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Position
16:complement(9480280..9571876)
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AA seq
2143 aa
AA seq
DB search
MGLPMQVLTCAIIALLHHHVNGGLIKRIIRQKRETGLNVTLPEDNQSVVFNHVYNINVPM
GSLCSVDLDSANEDTDLKPQVEPSKTYQEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCSSSSGCCHSSLTAEGQVDTTPYCSGRGNYSTEHCGCICEP
GWKGPNCSEPECPNNCNNKGRCVNGKCICDEGFTGEDCSQLTCPNDCSDQGKCINGVCLC
FEEYTGEDCSEELCPVACREHGKCVNGRCVCDEGFTGEDCSEPLCPNNCNNRGRCVEKEC
VCDEGYTGEDCGELICPNDCYDRGRCVNGTCYCEEGFTGEDCGELTCPNNCNNNGRCSNG
LCICNEDFVGDDCSERRCPKDCNKRGRCVNGKCVCNEGFAGAACGQVKCPKDCNNRGRCV
NGQCVCQEGFMGEDCSELRCPSDCSNRGRCVNGQCECDEGFTGEQCSQLKCPNDCNNRGR
CVNGQCVCEEGFVGEDCGELRCPNDCNNRGRCVNGQCVCEEGFVGEDCGELRCPNDCNEH
GPCINGQCVCDEGYMGEDCAELRCPNDCNNRGLCVNGLCQCDSGFTEIDCSQQRCPSDCN
NRGLCVNGLCQCDEGFQGVDCGERSCPNNCNDMGRCVDGQCICDGGYEGDDCSNVSSPSD
LTVTDVTDQTVNLEWKNENLVNEYLITYVPTSVGGLELQFRVPGNKTSATIRELEPGVEY
FIRVFAILKNKKSIPISARVATYLPAPEGLTFKSIRETSVQVEWDPLNISFDGWELVFRN
MKKEDNGDITNSLKRPDTSYMQPGLAPGQQYNVSLHVVKNKTRGPGLFRVFTTKLDGPSQ
IEARDVTDTTALITWFKPLAEIDDMELTYGPKDVPRDRTTIDLFEDESQYSIGNLKPHTE
YEVTLISRRGDMASDPVKEIFVTDLDAPKNLKRLSQTDNSITLEWKNSQASIDNYRIKFA
PISGGDHAEITVPRSNQATTKATLTGLRPGTEYGIGVTAVKQDRESAPATMNAATDLDNP
KDLEVTDNTETTLSLRWRRPLAKFDVYRLTYIIPSGRKNEIEIPADSTSYLLRGLEAGTE
YTITLVAEKGRHKSKPTMVKESTEEEPELGKFTVSKVSWDGFQLNWTAAEGAYETFVIQV
QEPNNPEEARNLTVPGSLRFVNVTGLKANMPYTVTLYGVIQGYRTKPLSVNTTTAAEPEV
GELTVSSITPESFNLSWTATDEAFKTFTIEIIDSSRLQEPMEYNISGNLRTAHISGLSPK
TDFIVYLSGSTRGFRTKAISVAATTVDEPLLSKLTVSNATSDSVSLTWEAQDAAFDRFVL
EVINSDLPLDSLVHTVPGASRSFVITNLRATTNYTVQLHGLVDGQGAQTLTALVTTEAKP
QLGTLTLTNVTPDSFNLSWTARDGPFAKFVINVRDSYAAHAPQELTVSGGARSARISGLA
DYTGYDINIQGTTNAGVHTEPLTAFVMTESMPPLENLTVSDINPYGFTVSWMASENAFDN
FLVIVVDSGKLLDPQEFLLTGAQRQLELKGLITGIGYEVMLYGFAKGRQTKPLSTVAVTE
AEPEVDNLLVSDATPDGFRLSWTADDGVFDSFVLKIRDTDRQSDPRELIVPGHERTQDIT
GLKEGTKYDIELYGLISGRRSQPINVVATTAVGSPKALTFSDITENSATVSWSPPRTRVE
SFRISYIPITGGTPNVVTVDGTKTRTKLVKLIPGVDYTVSIISIKGFEESEPISGILTTA
LDSPSGLVAVNITDSGALAVWQPAIATVDNYVISYIAEDDPEVTETVSGNTVEYDLNGLR
PATEYMLRIYAVKGPQKSETVFTKFTTGMDAPRYLNAIEVQSEAAVLTWRPPRASVTGYL
LIYESIDGKVKEVILGPEATSYSLSELSPSTQYTVKLQALNRALKSKIIQTIFTTTGLLY
PYPKDCSQVLLNGESTSGLYTIYMNGNKSQSVEVYCDMTSDGGGWIVFLRRHNGKEDFYR
NWRTYAAGFGDPKDEFWIGLETLHKITSQGQYELRVDLRDKGETAYALYDRFSVGDSKTR
YRLKVDGYSGTAGDSMIYHNGRSFSTFDKDNDAAITNCALSYKGAFWYKNCHRVNLMGRY
GDNSHSQGVNWFHWKGHEYSIQFAEMKLRPISFRNLEGRRKRA
NT seq
6432 nt
NT seq
+upstream
nt +downstream
nt
atggggcttcccatgcaggttttgacctgtgccatcatagctttgctacaccaccatgtc
aacggtgggctcatcaagagaattatccgtcagaagcgggagaccgggttaaacgtgacc
ttgccagaggataaccagtctgtggtctttaaccacgtctacaacattaatgtacccatg
ggctccctctgctctgtggacttggactcagctaatgaggatacagacctgaagccccag
gttgagccaagcaagacctaccaggagcacacggtgaatgaggggaaccagattgtcttc
acacaccgcatcaacatcccccgccgggcttgtggctgtgcagctgcccctgacatcaag
gatctgctgagcagactggaagagctggaggggctggtatcctctctacgagagcagtgc
tccagcagctctggctgctgccacagcagcctaacagcagagggacaagtggacaccacg
ccgtattgcagtggacgagggaactacagcactgagcactgtggctgcatttgtgaacct
ggctggaaaggacccaactgctcagaaccagaatgcccgaacaattgcaacaacaaaggc
cgctgtgtcaatggaaaatgtatctgtgatgagggcttcactggggaggactgcagccag
ctcacctgccccaatgactgcagtgaccaaggcaaatgcatcaatggtgtctgtctgtgc
tttgaggagtacaccggtgaggactgcagtgaagagctttgcccggtggcatgcagggag
catggaaagtgtgtgaacggtcggtgtgtgtgcgatgaaggcttcaccggtgaggactgc
agtgagccgctctgcccgaacaactgcaataaccgtgggcgctgcgtggagaaagagtgt
gtgtgcgacgaaggctacacaggtgaagactgcggcgagcttatctgccccaatgactgc
tacgaccgtggccgctgtgtcaacgggacctgctactgtgaggagggcttcaccggggag
gactgcggggagcttacctgccccaacaactgcaacaacaatggccgctgcagtaatggg
ctgtgcatctgcaatgaggactttgtgggcgacgactgtagcgagcggcggtgccccaag
gactgcaacaagcgggggcgctgcgtcaacgggaagtgcgtgtgcaacgagggctttgct
ggcgccgcctgtggccaagtgaagtgccccaaagattgtaacaaccggggccgctgcgtc
aatgggcagtgtgtgtgccaggagggcttcatgggcgaagactgcagtgagttgcggtgt
cctagcgactgtagtaaccggggccgctgtgtcaatgggcagtgtgagtgtgacgagggc
ttcacaggcgagcagtgcagccagctgaagtgccccaacgactgtaacaaccgggggcgc
tgcgtcaacgggcagtgtgtgtgtgaagagggcttcgtgggcgaggactgcggagagctg
aggtgccccaacgactgtaacaaccgggggcgctgcgtcaacgggcagtgtgtgtgtgaa
gagggcttcgtgggcgaggactgcggagagctgaggtgtcccaacgactgtaacgagcac
gggccctgcatcaatgggcagtgcgtgtgcgatgaggggtacatgggggaggactgtgct
gagctgaggtgccccaatgactgcaacaaccgggggctctgcgtcaacgggctgtgccag
tgtgacagtgggttcactgagatcgactgtagccaacagcggtgtcccagtgactgcaac
aaccgggggctctgcgtcaacgggctgtgccagtgcgacgagggctttcaaggagtggac
tgcggtgagcgatcctgccccaacaactgcaatgacatgggccgctgcgttgatgggcaa
tgcatctgtgatggtggatacgaaggggatgactgctccaatgtgtcctctccaagcgac
ttgacagtgacagacgtgacagatcagacggtcaatctggaatggaagaatgagaatcta
gtcaatgagtatctcatcacctatgttcctaccagtgttggtggcctagaactgcagttc
agggtgcctggaaacaagacatctgctaccatccgtgaactggagcctggtgtggaatac
tttatccgtgtgtttgccatcctaaagaacaagaagagtattccaatcagtgccagggtg
gcaacctatctgcctgctcctgaaggtctgacattcaaatccatcagggagacatctgtg
caggtggagtgggatcctctgaacatttcatttgatggctgggagctcgtcttccgaaat
atgaaaaaggaagataatggggacataaccaacagtttgaagagaccagacacatcatat
atgcagccaggtctggcaccaggacaacagtataacgtgtccctgcatgtagtgaaaaac
aaaaccagaggacctgggttgtttagagtgtttaccacaaagcttgatggcccaagccag
attgaggcaagagatgtgacagacaccacagctttaatcacatggttcaaacctttggct
gaaattgatgacatggaactcacctacggaccaaaggatgttccaagggacaggacgacc
atcgacctctttgaggatgaaagccagtactccattgggaatctgaagcctcacacagag
tatgaggtgacgctgatctctcggcgtggggacatggccagcgaccctgtgaaggaaatc
tttgtcacagacttggatgcaccaaagaacctgaagcgcctgtctcagacagacaacagt
atcaccttggagtggaagaacagccaagccagcatcgataactacagaatcaagttcgct
cccatctcaggtggagaccatgctgaaataactgtgccaaggagtaaccaggccacgacc
aaggctacactcacaggtctgaggcctggaactgaatatggcattggcgtgacagcagtg
aagcaggacagagaaagcgctcccgctactatgaatgctgcaaccgatctggataacccc
aaggacttggaggtcactgataacactgaaacgaccctctccctccgctggagaagacca
ctggccaagttcgacgtctaccgcctcacttacattatcccctctgggaggaagaatgaa
attgagataccagcagatagcacctcttacctcttgcgagggctggaggctggtacagaa
tataccatcaccctagtggcagagaaaggcaggcacaagagcaaacccacaatggtgaag
gagtctactgaggaggaacctgagctcggaaagtttacagtatcgaaggttagctgggat
ggtttccaactcaactggacagccgcagaaggggcctatgagacttttgtcattcaggtg
caggagcctaacaatccagaagaagctcggaatctcacagtcccaggcagcctacgcttt
gtgaatgttactggcctcaaggctaacatgccctacactgtcaccctttatggtgtgatt
cagggctacaggaccaaacccctttctgttaacaccacaacagcagcagaacccgaagtt
ggtgaactaacggtttccagcattacccccgaaagcttcaacctttcctggacagccacg
gatgaggccttcaagacctttaccattgaaattattgattctagcaggttacaggagccc
atggagtacaacatttcaggcaacttaaggactgctcatatctcagggctttcccccaaa
actgattttattgtctacctctctgggagcacacgtggtttccgcacaaaggcaataagt
gttgcagctactacagtagacgaacctctccttagcaaactaactgtctcaaacgctacc
tcagacagtgtgtccctcacatgggaagctcaggatgctgcctttgatcgctttgtttta
gaagttataaactctgacttgcctttggattccctggtgcacacagtgccaggggcctca
cggagttttgtaatcaccaacctaagagccaccactaattacactgtccaactgcatggt
ctagttgatggccaaggtgctcagactttgacagcactggttaccacagaggccaagcca
cagctgggcacgctcacactcacaaacgttacccccgacagcttcaacctctcatggacc
gcaagagatgggccttttgcaaagtttgttataaatgttagagattcctatgcagcccac
gcgccgcaggagcttacggtgtcaggaggggcccgcagcgctcgcatctcaggcctggca
gattacactggctatgatattaacattcagggcaccaccaatgcaggggtccacacagag
cccctcactgcttttgtcatgacagagtccatgcccccactggaaaacctaactgtctct
gacattaatccttatgggttcacggtgtcctggatggcatcggagaatgcctttgacaac
tttctagtaatcgtggtggattctggcaagctgctggacccacaggagttcctccttaca
ggagcccagcggcaactggaacttaaaggccttattactggcattggctatgaggttatg
ctttatggttttgccaaggggcgccaaacaaagcccctaagcactgtggccgttacagaa
gcagaacccgaggtcgacaaccttctggtttcagatgctaccccagatggcttccgtctg
tcttggaccgcagatgatggggtctttgacagctttgttcttaaaatcagggataccgac
aggcagtctgacccacgggaactaatagtgccaggccatgaacgcacccaagatataaca
gggctgaaagagggtactaagtatgacattgaactctatggacttatcagtggacgacgt
tcccagcccataaacgtagtagctaccacagctgtgggatcacccaaggcactcacgttc
tctgacattactgaaaactcagccacagtcagctggtcacctccaaggacccgagtagag
agcttccggatttcatacatccccataacaggaggtactcccaatgttgtgacagtggat
ggaaccaagactaggaccaagctggtgaaactgatcccaggtgtagactacactgtcagt
ataatctccatcaaaggatttgaagaaagcgagcctatctctggaattctgactacagct
ctggacagcccatcaggactggtagcagtgaatatcacagactctggggccttggcagtc
tggcagccagcgattgccacagtggacaattatgtcatctcctacattgctgaggatgat
ccagaagttactgagacggtgtctgggaacactgtggaatatgaccttaatggccttcgt
cctgcaactgaatatatgctgaggatctatgcagtaaagggacctcagaagagtgagacg
gtcttcaccaaattcactacaggcatggatgcaccaagatatttgaatgccattgaggtc
cagtcagaagcagcagtactgacatggaggcctccacgggcttctgtcaccggctatctc
cttatctacgagtctatcgatggcaaagtcaaggaagtcatcctgggacctgaggcaact
tcctacagcctgtctgagctaagcccgtccacgcagtacacagtgaagctgcaggcactg
aacagagccctgaagagcaagataatccagactattttcaccacaactggacttctctat
ccttaccctaaagactgctcccaagttctgctgaatggagaaagtacctctggactttac
accatatatatgaatggaaacaagtcacagtctgtggaggtgtattgtgacatgacctct
gatggaggtggatggattgtgtttctgaggcgtcacaatggaaaggaggatttctacagg
aactggaggacttacgctgctgggtttggggatcccaaggatgaattctggataggtctg
gagaccctccacaaaatcacttcccagggccagtatgagctgcgtgtggatctgcgagac
aagggcgagacagcttatgctctctatgaccggtttagtgtgggagactccaagacccgt
tatcggctaaaagtggatggatacagtggaacggcaggtgactccatgatctatcacaat
ggacggtccttctccacctttgataaggacaatgacgctgccatcacaaactgtgcgttg
tcctacaaaggtgctttctggtacaagaattgtcaccgagtaaatctgatgggcagatat
ggggacaacagccacagtcagggtgttaactggttccattggaagggccatgaatactcc
atccagtttgcagaaatgaagttgagacccatcagcttccggaatctagaagggagacga
aagagagcataa
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