Natator depressus (flatback sea turtle): 142000026
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Entry
142000026 CDS
T11397
Symbol
SETX
Name
(RefSeq) putative helicase senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
nds Natator depressus (flatback sea turtle)
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nds03021
]
142000026 (SETX)
Enzymes [BR:
nds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
142000026 (SETX)
5.6.2.5 RNA 5'-3' helicase
142000026 (SETX)
Transcription machinery [BR:
nds03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
142000026 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142000026
NCBI-ProteinID:
XP_074830124
LinkDB
All DBs
Position
16:complement(16729177..16777421)
Genome browser
AA seq
2862 aa
AA seq
DB search
MSTCRWCTPGGSSTTQFLRTYASKTLSPEDRAAANDDLCYCLECVVEYHKARDGLPSLLQ
EILWELETSRLIDHFEKSMKTDIEEDDELFIVDDNGETKLSGYTGPDFENNLRVPLLEIL
KYPYLLLHERISELCVEALCKMEQVNFSFQVFDKHPGIYLLLVHPNEVIRRWAILTARNL
GKVDRDDYYDLQEVLTCLFKVIELGLFDSPDIYSSSMIEKGKLILLPSHLYDTTNYKNYW
LGICMLLTVLEEQAMDSLLLGPDKQNDFMQSILHTMEKQTDDESIDPFWPALHCFMVILD
QLGSKVWGQLIDPVQAFQTIINNVSYNNEIKNIRNSSRRTKSEPESNYEEEMVTCSQIVY
NYNTEKPKKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGQDMRVHNSTFLWFIPFVQS
LMDLKDLGVAYIVEVIHHLCSEIKGFLSERVQQCDKVSEFFILILVSVVELHRNKKCLHL
LWVSSQEWVEAVVKCAKLPTIAFTRCSEKAPGNAPKLTPTISSQASNSVQHACVQLIRSL
LREGYQLGQQTVCKQFLDKLNLLLRGNLPMGWQLNNRETQELQMCLKQVIRSIKDRSSNA
SIPVENSVICTNLPTIAIKQEKGTASDRCQMNIQYRDNLSPPFSLASGSDEACQESSSPR
RRGIWEEEYREMSFNNTKLCVTAECLLTDIKKEPHDRSFQECEHSDSSGATKIHKDTHKN
GNNYQVQGNQNKNNSLLKQCFNTSPQVCDFKSHTILERDETEVRMPECLSAQSCSSSHED
IHSSNGKDGSCSPNSCSKFKVDPDKITNLKTQVQNADWATKLLKLMKQSASNSEVDQLQS
RSESLCTSKDGSRDQEVNILNEGETSVNFNTSNASENKQENSMNSTFQIKVLSLKQESND
TKADYSNFIKKEAGLEESGGEEDNIPLDTFIHYLKKKRSLSGRSSSLPKPLLNKDLNTEI
PDQGQSNSGSLCPKRGDLKDQKVSMLRTDKTSANFNSLSSSENKEEIPRNAPLISPLLIK
HESTDRLLDFSRYFKREGNSEEKRNHEDNAAVACDLVKQFGASPLTDSQIDRDLDKLSLA
AYAKGVNFPVDSSQERSVHLSHIKRKVKGAVRSSTKGQSNESSSDADCPNNEVIIISDSS
SDEEKKLDIKKPVKKDVYMCPEKQPLTPDYVSDSANKKEQLETHSSPLPCEEHNSQFFEF
ETEDDVFSVWQDSQINDEEVNQAQEQDSNLTSTSKCASDSFELADRINDWGYDTDYISDD
VIEKAEEAVERQVDSLSHKEVSKTGTKSEATFQEPAIQGNATAQSENSTQPDAVAKVHAK
NTGLMEPRASASSVSLASKLTIKKSTLSPGKSVAKSKLVRTALRSPRKMSLKTVQNKKLP
QTSSRNTEPCRSTPAVVPPKKVHQCPEPTSTVVKLGLKKAPRKAFELSQRSLDSLAELRS
YGKAAGAVQTPQKQKTKLIAPQNLLTKHNRKMLACQDLPFRRQIRPTQVGRGKNQIGSSE
GRRKKITEKSDPKHPIQQPVDFDPVSAVGTSEKQKASTAERVCYPSSNDGKNVRKSCSPG
RKEVQTTHMNKMAPHGSKESNMKIEENNMAVPALQIKSCFSSSLNGDYKNEPAEREYVVP
LVSPSTPNFEGATLEVSKPKLNEESDDDLFLTQLDPVDMEMCSQMENVGDIIIASEKEPV
DTEVDAAESLLQNEPLGIVKCKYKDCTEQVEKTVEYCRKHSATDASDHLFVKPGLPPRKP
EKPSTTKIFSSNSSSRSANLTKDLENISKHSSSKAKSNVVKSRVSKTGNPKAVSAENQIV
KTPSFSNSLRSQSSSNVLRPQNMQTNSTSCFPNRSALGAHSGQARGLPSFPQANALVTQQ
RDHSIFVTEILKWNYEMFVNFSQFGLPHNLLQSIMVSVPVKFQGYNDYFNTFFPLMMLNA
FETVAQEWIENQKTREKNYHHLHLQNFCADLNRADFTACIRESDLAKQLHPKDDDLIFLV
VPEKQNTFTEESEMESHLVYHVGFVTRFSRASLRETRQNEQHVVCHLSVQTRGNLSYYIN
QPVKCVVVSSLVTTQRRFKGLLLLSRSPLAKPIINPSYTDFCPRDLNVTSESTTSYMRDY
NADQKKAIETAYAMVKEHPRLPRICLIHGPPGTGKSKTIVGLLYRILTERSGNENPAQNL
NAKIKRNRVLVCAPSNAAVDELMKKIILEFKEKCQDRKNPLGNCGDINLVRLGPEKSIST
DVLRFSLDSQVSHRMNRGQPGRDQDIHRKKEALDRQLDSLSRQRAMDRCDKRQKSQKLDE
EIARLSRERQQLTSQLRQVGGRPQEVQASIILESHIICCTLSTSGGFLLESAFRRQGLDP
FSCVIVDEAGQSCEVETLIPLTHRCSKLVLVGDPKQLPPTVISMKAQEYGYDQSMMARLH
KHLEEQMQQNVTGKLPILQLTVQYRMHPDICLFPSNYIYGRTLKTDRATEENRCSSDWLF
QPYLVFDVADGHEKRNNDSFANPQEVKLVMEIMKLIKEKKNDIGFRHIGIITPYSAQKKM
IQQELDREFGRGRAGEVDTVDGFQGRQKDCIIVTCVRANSTQGSIGFLASLQRLNVTITR
ARYSLFILGRLTTLMDNKDWNKLIQDAQRRGAIIKTCDKNYKRDAVKILKLKPTLQRPLS
YPPTAALSEKATQMQACLGSDGKNKVLNRKSSNDSGILSARAGLSAQGNGVVRQAPESQA
LGFKGVTLPTPVQPAVRERPRDPRLARRAEATGKEQASKNSNPSALSNPDVTLSRGPDAS
AAHWGQISTVQPTVSKAEDSNKPNQTVRQPDMPFTASHTARQDHDWRVSFSSKEARTGSK
EDQKGNEWSKDKDYRTPASRRALEQPPENKDLSEAKRRKVSY
NT seq
8589 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgtcgttggtgtacgcctggtggttcctccaccacccagttcctaagaact
tatgcttccaagactttatcccctgaagatcgtgcagcagctaatgatgatctctgttac
tgcctggaatgtgtggttgaatatcacaaggcaagggatggattgccaagcttactgcag
gagatcttatgggagttggaaacctcccgtctcatagaccactttgagaaatccatgaag
acagacattgaagaggatgatgaattatttatagtggatgacaatggggaaactaaactg
tctggttacacgggcccagatttcgagaacaacctgcgtgtacctcttctagaaatactg
aaatacccatacctgctgctacatgaacgaatcagtgagctctgtgttgaggctctttgt
aaaatggaacaagttaacttctcctttcaggtctttgacaaacatccgggcatttatctg
ttgttggtacaccccaatgaagtgattcgtcgatgggccatcctgacagcaagaaattta
gggaaagtcgacagggatgattactatgacttacaggaagtgttgacttgcttgtttaaa
gtcattgagttggggctgtttgacagtcctgatatttatagttcttcaatgattgagaag
gggaaactcattcttctgccatcccatttgtatgataccaccaactacaaaaactactgg
cttggtatctgtatgttgctaacagtgctggaagaacaagctatggattctttgttgctg
ggtccagataagcagaatgatttcatgcagtctatacttcacaccatggagaaacaaaca
gatgatgaaagcattgatcctttctggccagcgctgcactgttttatggtgattttggat
cagctcgggtctaaagtatggggtcaactcatcgatccagtccaggcctttcaaaccatt
atcaacaatgtcagctacaacaatgaaataaaaaatatacgcaatagttcaaggaggact
aaatctgaaccagagtcaaactatgaggaagaaatggttacttgcagccagatagtatat
aattataacacagaaaagcccaaaaaggatactggatggaagacagccatttgtccggat
tattgccccaatatgtacgaagatatgcagacattggctaatgtgcttcaatctgatatt
ggccaagatatgcgcgtccataacagcacatttctatggtttattccttttgttcagtcc
ctaatggacctcaaggacttgggcgtggcttatatagtagaggtcattcaccatctgtgc
tcggaaatcaaaggctttctcagtgaaagagtccagcaatgtgacaaagtttctgaattt
ttcatcctgattttggtgtcagttgttgaactacacagaaataaaaagtgcctgcatttg
ctttgggttagctctcaggaatgggtggaagcagtagtgaaatgtgctaaacttccaact
atagcatttacgcgctgctctgaaaaagcacctggaaacgctcctaaacttacaccaaca
atatcttcacaggcttctaactctgtacagcatgcttgcgtgcagttgatacgcagcctt
cttcgagaaggctaccagttagggcaacaaactgtttgcaaacagtttctagataaactc
aatctgcttttgcgtggaaacttacctatgggttggcagctgaacaaccgggaaactcag
gaattgcaaatgtgtttaaagcaggtaataagaagtataaaggacagatcatcaaatgct
tccatacctgtggaaaatagcgtgatctgtacaaatttgcccaccattgctataaagcaa
gagaaagggacagccagtgacaggtgtcagatgaatatacaatacagggataacctcagt
cccccattttctttagcatctgggagcgatgaggcttgtcaagagagttcttccccaaga
agaagaggtatctgggaagaggaatatagggaaatgtcttttaacaatacaaaattatgt
gtaactgcagaatgccttttgacagatattaaaaaagaacctcatgataggtcatttcag
gaatgtgaacattctgatagctctggagcaacaaaaatacacaaggatacccataaaaat
ggaaacaactaccaagtgcaggggaaccaaaataagaataactccttacttaaacagtgc
ttcaacacaagtcctcaagtctgtgatttcaaaagtcatactatattggagagagacgaa
acagaagtgaggatgccagagtgtctgagtgctcaatcttgttccagttctcatgaagat
attcacagctcaaatggaaaggatggaagttgctcccctaattcctgttcaaagtttaag
gtagatcctgataaaatcacaaatttgaaaacccaggtacagaatgctgattgggccaca
aaactattgaagttaatgaagcaatcagcttcaaattcagaagtagaccaactacagtct
cgctctgagagtctctgtacaagtaaagatggcagcagagatcaggaagtgaatattttg
aatgaaggtgaaacctcagttaactttaatacttcaaacgcttctgaaaataaacaggag
aacagcatgaacagtacttttcaaatcaaggtgctctctcttaagcaggaatcaaatgac
accaaggcagattattcaaatttcattaaaaaagaggctggcttggaagaaagtggaggt
gaagaagacaatattccacttgatacgtttatacattatttaaagaaaaagagatccctt
tcaggaagatcaagttctttgccaaagcctttactgaataaagacctgaacacagaaata
ccagatcaaggacagtctaattctggcagtttatgcccaaagagaggtgacctcaaagat
caaaaagtgagcatgctacgtacagataaaacttcagcaaattttaacagtctatctagt
tctgaaaataaagaggagatacctaggaatgctcctctaatcagtccactcttaattaag
catgagtcaactgacagactgttagatttttcaagatattttaaaagagaaggcaattca
gaggaaaaaagaaatcatgaagataatgcagcagttgcatgtgatttggtaaagcaattt
ggagctagccccttaacagactctcagattgatagagaccttgataaattatccttagcc
gcttatgccaaaggtgtcaattttcctgttgattcaagccaagaacgctcagtacatctg
agtcacattaaaaggaaagtaaaaggtgctgttagatcatccacaaagggccaaagtaat
gagtcctcttctgatgcagattgtcccaacaatgaagtcatcatcatttcagattcctct
tctgatgaggaaaaaaagttggatattaagaaaccagtaaaaaaagatgtgtatatgtgt
ccagaaaaacagcctttaacacctgactatgtttctgatagtgcaaacaaaaaagagcaa
ttggagactcatagctccccgttgccatgtgaggaacataattctcaattttttgagttt
gaaactgaagatgatgtgttttcagtctggcaagattctcagataaatgatgaggaagtg
aatcaggcacaggaacaagactctaacttgacatcaacaagcaaatgtgcttcagatagt
tttgagttggcagatcgtataaatgactggggttatgatacagattatatcagtgatgat
gtcattgaaaaagcagaagaggccgttgaaaggcaggtagattctctgtctcataaggaa
gttagtaaaactggcacgaaatctgaggcaacttttcaagagcctgctatccagggaaat
gcaactgctcagtctgagaattctactcagccagatgctgttgctaaagtccatgccaaa
aacacaggcttgatggaacccagagcatctgcatctagtgtatcattagcttcaaagttg
actattaaaaaaagcactttaagcccaggcaaaagcgtagcaaaatccaagttggtaaga
actgcccttagaagtcccagaaaaatgagccttaaaactgtgcaaaacaaaaaacttcct
cagactagttctagaaatactgagccttgcaggtcaacccctgctgtagttcctccaaag
aaagttcaccagtgtcctgagccaacttcaactgtggtcaaacttggcctaaaaaaggcc
ccccgcaaagcatttgagttatcccagcgatccttagatagtctggctgaattgcgcagt
tatgggaaagctgctggggcagttcagactccacagaaacaaaaaactaaattaattgct
ccacagaatctacttacaaaacataatagaaaaatgttagcctgccaagatcttccattt
cggaggcagataagacccacacaagtggggagagggaaaaatcagataggaagttctgag
ggcagaaggaaaaaaataactgaaaagtctgatccaaagcacccaatacaacagcctgtg
gattttgaccccgtatctgctgtgggaactagtgaaaaacaaaaagcgagcacagctgag
cgggtatgctatccctcaagcaatgacgggaaaaatgtgagaaaaagctgctcacctggg
agaaaggaagtccaaactacacacatgaataaaatggctccacatggttctaaggaatct
aacatgaaaatagaagaaaacaatatggcagttcctgcattacagatcaaatcatgtttt
tcttcatctttaaatggagactacaaaaatgaacctgcagagagagaatatgttgtccct
ctagtttccccatctacacctaactttgagggggcaactttggaagtgagcaagcctaaa
ttaaatgaagagagtgatgatgatttatttttaactcagttagatcctgtggatatggaa
atgtgttcgcagatggaaaatgttggagatattataatagctagtgaaaaagagccagta
gacacggaagtagatgctgctgaaagtctgctgcagaatgagcccttaggtattgtgaag
tgcaagtacaaagattgtacagaacaggtggaaaagacagtggagtactgtaggaagcat
tctgccactgatgcttcagatcatctctttgtcaagccaggtttaccacctcgtaagcct
gaaaaaccttccactactaaaattttcagctcaaatagctcttcacggagtgccaacctc
acgaaggatcttgaaaatatttcaaagcactcgtcatcaaaagccaagtcaaatgtggta
aaatccagagtgtccaagacagggaatccaaaagctgtatcggcagagaaccagatagtc
aagaccccaagtttcagcaatagtcttcggtcccagagttccagcaatgttctccggccc
cagaacatgcagacaaacagtacttcatgttttcccaacaggtctgccttgggggctcat
tcagggcaagcaagaggtctcccttcctttccacaagcaaatgctcttgtcactcaacag
cgtgatcatagtatttttgttacagagattctgaaatggaactatgaaatgtttgtcaac
ttcagccagtttggacttccacataaccttcttcaatcaattatggtctctgttcctgtc
aaatttcagggatacaatgactattttaacacatttttccccttgatgatgctaaatgcc
tttgaaacagttgcacaggaatggatagaaaaccagaaaacaagagagaaaaattatcat
catttgcacttacaaaatttctgtgctgacttgaatcgagcagattttacagcgtgcatt
cgggaaagtgatctggcaaaacagcttcatccaaaggatgacgacttgatctttttggtg
gtgcctgaaaaacaaaacacctttacagaagaaagcgagatggagagccatctagtgtat
catgttggttttgtgacccgcttctcccgtgcatcactccgtgaaacgaggcaaaatgag
cagcatgttgtctgtcacctttctgtccaaactcgaggcaatttgtcatactacataaat
cagccagtgaaatgtgtagtggtcagctctctagtgaccacgcaacgaaggttcaaaggt
ctgctactgttgagcaggagtcctctggctaaacccatcataaatccaagttacactgac
ttctgtcccagggatttgaatgtaacttccgagagcactacttcctacatgagagactac
aatgcagatcagaagaaggctattgaaactgcttatgctatggtgaaggagcatccaaga
cttcccagaatctgcctgatccatgggccacctgggacagggaaatcaaaaactattgtt
ggactcctgtaccgtattctgacagagagatctgggaatgagaatccagctcaaaacttg
aatgccaagatcaagcgaaaccgtgttctggtttgtgcaccatccaatgctgctgttgat
gaactcatgaaaaagataatcttggagttcaaagagaaatgccaagacagaaaaaatcct
ttgggaaattgtggagatataaacttagtgcgactaggtccagaaaagtcaataagcact
gatgtcctgagattcagcctggacagccaagttagccacaggatgaaccggggacaacct
ggccgtgaccaggatattcacaggaaaaaggaagccctagatcgccagctggacagtctc
tctcggcagcgtgccatggatagatgtgataagaggcagaagagtcaaaagttagatgag
gaaattgccagactttcaagagagcggcaacaactcacttctcagctgaggcaggttgga
gggcgccctcaagaagtgcaggctagcatcatcttggagtcccacatcatctgttgcaca
ttgagcacaagcggaggctttctgctggagtctgcttttcgtcggcaaggacttgaccct
ttcagctgtgtcattgtggatgaggcagggcagtcatgtgaggttgaaactctgattcca
ttgactcatcgctgtagtaaacttgtccttgttggagatcccaagcagctccctcctact
gtaatatctatgaaagctcaagagtatggctatgatcagtctatgatggctcgcctgcac
aaacacctggaggaacagatgcagcagaatgttacagggaagctgcccattttacagctg
actgtacaatataggatgcatcctgacatctgcctcttcccatccaattacatttatggc
aggactttaaagactgacagagcaacagaagagaacagatgttcttcagattggctattc
cagccatacctggtctttgatgtagcagatggccacgagaaacggaataatgactctttt
gctaatccccaggaagtaaagctggtgatggaaataatgaaattgattaaagaaaaaaag
aatgatattggttttcgtcacataggaataatcaccccttacagtgcacagaaaaagatg
attcaacaagaactggacagagagtttggcaggggcagagcgggagaagtagacacagtt
gacgggttccagggtcgacagaaagactgcattatagtgacgtgtgtaagagcgaacagc
acacaagggtcaattgggtttctggcaagtcttcagcgtctgaatgttacaattacccga
gccaggtacagcctcttcatccttggaagattgacaacgttaatggacaataaagactgg
aataagctgattcaggatgctcagagaagaggcgctatcatcaagacttgtgacaaaaac
tataaaagggatgctgttaaaattctgaagctcaaaccaacattacagcggccactctcc
tatcctcctactgctgcgctgtcagagaaagctactcaaatgcaggcatgtttgggcagt
gatgggaagaataaggtcctcaacagaaaaagcagcaatgactctggaatactctcggcc
cgtgctggcctgtcagcacaaggcaatggagtagtaagacaggcaccagagtctcaagct
ttgggtttcaaaggagtcactcttcccacaccagtgcagcctgctgttcgagagagacca
cgggatccaagactggctaggagggcagaagcgacagggaaggagcaggcctccaagaat
agcaatccatcagccttgagcaatccagatgtgacattgtcacggggacctgatgcatcg
gcagcccactggggtcagatcagcaccgtgcagcctactgtctccaaggcagaagattcc
aacaaacccaaccaaactgtaagacagccggacatgcctttcactgcttcccatacagcc
aggcaggaccatgactggagagtttctttctcctcaaaagaggcaagaactggcagtaaa
gaagaccagaaaggtaatgagtggagcaaagacaaggactatcggacccctgcaagcaga
agggcattggaacaacccccagagaacaaagacttgagtgaggccaagaggaggaaggtc
tcctattag
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integrated database retrieval system
