Natator depressus (flatback sea turtle): 142000209
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Entry
142000209 CDS
T11397
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03030
DNA replication
nds03420
Nucleotide excision repair
nds03430
Mismatch repair
nds03440
Homologous recombination
nds03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142000209 (RPA1)
03420 Nucleotide excision repair
142000209 (RPA1)
03430 Mismatch repair
142000209 (RPA1)
03440 Homologous recombination
142000209 (RPA1)
03460 Fanconi anemia pathway
142000209 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nds03000
]
142000209 (RPA1)
03032 DNA replication proteins [BR:
nds03032
]
142000209 (RPA1)
03400 DNA repair and recombination proteins [BR:
nds03400
]
142000209 (RPA1)
Transcription factors [BR:
nds03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
142000209 (RPA1)
DNA replication proteins [BR:
nds03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
142000209 (RPA1)
DNA repair and recombination proteins [BR:
nds03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
142000209 (RPA1)
MMR (mismatch excision repair)
142000209 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
142000209 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142000209
NCBI-ProteinID:
XP_074830388
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Position
17:659349..703612
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AA seq
616 aa
AA seq
DB search
MSARLSEGAIAAIMQGENNLKPVLQVINIRAIATGNGPPRYRVLMSDGVNTLSSFMLATQ
LNSLIEEERLSAHCICQVNRYIVNSLKDGRRVIILMDLDVLKTADVVGANIGNPVPYNEG
QGHQQQRSSAPAASPGHSKPQQQNGNSAVGPTTTKYQGPSKQFGKAGGTSFLSTPGGSQS
KVVPIASLNPYQSKWTICARVTQKGQVRTWSNSRGEGKLFSMELVDESGEIRATAFNDQV
DKFFPLIELNKVYYFTKGHLKTANKQYTAVKNDYEITFHNETSVVPCEDAQHLPSVQFEF
VPISDLENTCKDSIIDIIGVCKSYEDSTKITVKSTNREVSKRNVHLMDTSGKMVTATLWG
DEAERFDGSRQPVVAIKGARVSDFGGRSLSVLASSTVVVNPDSPEAFKLRGWFDSEGHLL
ECTSISDLRGGPTIGGNTNWKTLHEAKSENLGQGDKADYFSCVGTVVFLRKENCMYQACP
SQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADCQENQWVTCFQESAEVILGQ
NAAFLGELKEKNEQAFEEVFQNANFSSYEFRIRVKLETYNDESRIKATVLDVKPVNHKEY
SKRLIMNIRKNAVQLG
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcggctgagcgagggagccatcgcggccataatgcagggagagaataattta
aagcctgtcctccaagtcattaacatccgtgccatagccacaggaaatgggccacctcgt
taccgtgtgctgatgagcgatggggtgaacacactttcctctttcatgttggctacacag
ctgaactctctaattgaagaggagcgcttgtctgcccactgtatctgccaggttaacaga
tacattgttaacagcctgaaagatggaaggagagtgattatattgatggatttagatgtt
ctgaaaacagctgatgtggttggtgcaaatattggcaatccagtcccatacaatgaagga
caggggcaccagcagcaacgttcctcagctccagcagccagcccaggacacagcaaacca
cagcagcagaatggaaattcagcagtaggtcccactactactaagtaccagggcccctca
aagcagtttggtaaagcaggtggtactagcttcttgagcacccctggtggatcacagtcc
aaagtggtaccaattgccagtctgaacccataccaatccaaatggaccatttgtgctcgt
gttacccagaaaggccaggttcgcacatggagcaactcccgtggtgaaggaaagctgttc
tctatggagctggttgatgaaagtggtgaaatcagagctactgcgttcaatgatcaagtg
gacaagttctttcccctcattgaattgaacaaggtgtattacttcaccaaaggccatctg
aagacagctaacaagcagtacacagctgtgaaaaatgactatgagatcacattccataat
gagacttctgttgtaccctgtgaggatgctcagcaccttccttcagttcagttcgagttt
gtgcccatctctgacttggagaacacatgcaaagactcaattatcgacataattggagtc
tgtaagagctatgaagacagcactaaaattacagtgaaatctaccaatagagaggtgtcc
aagaggaatgtgcatttgatggatacatcggggaagatggtgacagctactctttgggga
gatgaggctgaaagatttgatggttctagacaacctgtggtagccatcaaaggagccaga
gtctctgattttggtggccggagtctctctgtcttggcctcgagcacagtcgtggtgaac
ccagatagtccagaagcatttaagctccgaggatggtttgactctgaagggcaccttttg
gaatgtacctcaatctctgatctgagaggtggaccaacaattgggggaaataccaactgg
aaaactttgcatgaagctaaatctgaaaatttgggacaaggagataaggcagattatttt
agctgcgtgggcacagtggtattcctgcgcaaagagaattgcatgtaccaggcatgtccc
tctcaggactgcaataaaaaagtgatagaccaacaaaatggactgtatcgctgtgagaaa
tgcgatcgcgagttccccaacttcaagtatcgcatgatactctcggtgaacattgcagac
tgtcaggagaatcagtgggtgacttgttttcaggagtcagcagaggtcattcttgggcaa
aatgctgctttcctgggagaactgaaagaaaagaatgagcaggcatttgaggaagtgttc
caaaatgccaacttcagctcatacgagttcaggatcagagtcaagttggagacttacaat
gatgaatctcgtattaaggctacagtactggatgtgaagcctgtgaaccacaaagaatac
agcaagaggctgatcatgaacatcagaaaaaacgcagtacagctaggttga
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