Natator depressus (flatback sea turtle): 142000224
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Entry
142000224 CDS
T11397
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
nds Natator depressus (flatback sea turtle)
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nds04121
]
142000224 (TRIM50)
Ubiquitin system [BR:
nds04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
142000224 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-B_box
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
TRIM_CC
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
zf-RING_2
U-box
zf-RING_10
Trimer_CC
Sina_RING
zf-Nse
DUF677
zf-RING_6
ING
Motif
Other DBs
NCBI-GeneID:
142000224
NCBI-ProteinID:
XP_074830413
LinkDB
All DBs
Position
17:complement(22161315..22170150)
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AA seq
496 aa
AA seq
DB search
MARKMSVCELEDQLLCPICLEVLKEPLMLQCGHSFCKSCVGSLMCNLDQQLLCPVCRQAV
DCSTLLPNVTLACVIEALRTMGDSDPNQESCPVHHNPLSLFCEQDQEVICGLCGIIGAHR
QHKIMPVSTVYSRMKEELSVLITEVQQHKRKLDEHISKLVNNKTRIANESDVFKWVIRKE
FQELHRYIDEEKASFLESIERKAGHLIASIESQVTQTSDTLHKLQEMESSLEKLNNESQL
DFIRNYGSFPSRSEFLPQHPAEGTFSAISFKPGFHQDDIKMTVWKRLLRRVLPAPETLKL
DPVTGHPLLELTKDNTVVQSRLLYQRRGSNPERFDSSNCILTNKGFSWGKHYWEVIVGTK
SHWRLGIIKGTASRKGKLNKSPEHGVWLIGLKEGKVYEAFNNPRTTLPLTARPQRIGIYL
HYEKGELTFYNADSPDELIPIYTFRAEFQGKLYPILDMCWHERGTNALPIVLPTATMIRH
TQAPDSSLDPPEPTKL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaagatgagtgtctgtgagctggaggaccagttgctttgccccatttgcctg
gaggtcttaaaggagcccctgatgctccagtgtgggcactccttctgcaagtcctgcgtg
gggtccctcatgtgcaacctggaccagcagctcctgtgccccgtgtgccgccaagctgtg
gactgcagcaccttgctgcccaacgtcacgctggcctgcgtcatcgaggcgctgcggacc
atgggtgattcagatcccaaccaggagtcctgccctgtccaccacaaccccctcagcctc
ttctgcgagcaggaccaagaggtgatctgtgggctttgcggcatcattggggctcaccgt
cagcataagatcatgcctgtctctaccgtgtacagccggatgaaggaggagctttcagtg
ctaataacggaggtccagcaacacaagaggaagctggatgagcacatcagcaagctggtt
aacaataaaacccggatcgcaaatgagtcagacgtcttcaagtgggtgatccggaaggag
ttccaggagttgcaccgatacattgacgaggagaaggccagcttcctggagagcattgag
aggaaggctggccacctcattgcctccattgagtcccaggtcacgcagacgtcagacacc
ctgcacaagctgcaggagatggagagctcgctggagaaactcaataatgaaagtcagctg
gatttcatccggaactacggctcattcccctccaggtcagagtttctcccccagcaccca
gctgaagggaccttcagcgccatctcctttaagccaggtttccaccaagatgacatcaag
atgacagtatggaaacgtctgctccgcagagtcctgccagccccagagacactgaagctg
gacccggtgacaggacatcctctgctggagctgaccaaggacaacactgtggtgcagagc
aggctgctctaccagcgccggggcagcaatcctgagcgctttgactccagcaactgcatc
ctcaccaacaagggcttctcctggggcaagcactactgggaggtgatcgtaggcaccaag
agccactggcgcctgggcatcatcaagggcacagctagccgcaagggcaagctgaacaag
tctcccgagcatggcgtgtggctcattggcctgaaggaaggaaaggtctacgaggccttc
aacaacccccgcaccacgctgccgcttacggcccggccccagcgcatcggcatctacctg
cactatgagaagggtgagctgactttctacaatgccgacagccccgatgagctcatcccc
atttacaccttccgggcggagttccagggcaagctctaccccatcctagacatgtgctgg
cacgagcggggcaccaacgccctgcccattgtgctgcccacagccaccatgattcgacac
acacaagctcctgacagcagcctggacccaccggagcccacaaagctatag
DBGET
integrated database retrieval system
