Natator depressus (flatback sea turtle): 142000280
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Entry
142000280 CDS
T11397
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
142000280 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nds04121
]
142000280 (RNF43)
Enzymes [BR:
nds01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142000280 (RNF43)
Ubiquitin system [BR:
nds04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142000280 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
DUF5305
KIAA1549
zf_RING_Vps8_fungal
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
142000280
NCBI-ProteinID:
XP_074830539
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All DBs
Position
17:complement(23282112..23409371)
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AA seq
824 aa
AA seq
DB search
MSAGPQLQLAVLWPWLLMATLQVRLGHTGLAVAAAVESERSAAQKAIIRVIPLKVEPITL
EGVFADVAEVTPAEGKLLQFHPLSLCNTSEDEHTSSGFVTIVKLERPDRDLHPCLSLDNK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKQQPAWPDYDVWILLTVLSTVIVIILIFVVRTKCHWNRTQDSLQQQTMQAISQLAIR
KYQARCQQDALRDSASSCSSAPICAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNIIEGAAFAQPAHLRQNPQDLEPGQRLHLFRQHPGHALYRLPEAHPQRRLRNFA
SQLPHGNPFFHSPELSQLDLTTMHYMPYRPVGSMATCSHQPSLAQGLGNEQHRKSPACGQ
MPSSHRTCPFQHQARCLGFRTAVAPRQHHAAPLRRGTSHGRQQNSSGSGESYLTLHSGYL
ADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPWVYCSSTDNGQ
EQLQSPGEPRLRSLDLKETGSSALAKSQILTHVHYHHHRHHHYRKDPECPSGRSGQEPSQ
HKPWFSGAVHSARTQKRTEKTRHCKQPLESSPMSQDASLSGQPSCVHQGPDLSKHLSSSA
DGSDFSWVASKQAGTAGPLPFPLLQKHGLQSRHPRRKRKCRPEPALAHLSEDSDMHKDCN
VHIHYGHSPSYCCSPDVQPLLPTAPMPYCSGSQVVWKCLVPPSNLESQQQDKDLSEWEGK
PMYPVDFSGTGTTEGNTSLYLPCQTLQHNQGSKEEIQDVYEHSV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccagctgcagctggctgtcctctggccttggctgctaatggctaca
ctgcaggtcagacttggccatactgggctggcagtggcagcggcagtggagtcagagaga
tcagcagcacagaaggctatcattagggtgatccccttaaaagtggagccaatcacattg
gaaggagtgtttgctgatgttgctgaggttactccagcagaaggaaaactgctgcagttc
cacccgctgtctctgtgtaacaccagtgaggatgagcacaccagctctggatttgtcact
attgtcaaactcgagcgaccggatcgagatctccacccctgtctgtcattggacaacaag
gcgaagctagcaggggagcggggggctcgtgccatcctcttcgacatcacggatgatgaa
agcgctgctgaccagctgaggaaacccaggggcctgagtcagcctgtggttctgatccgg
ggccatgatgctgagcttctgatgggcgttgtgaacaagaatcgagaagcacatgtgaag
attgaggttaaacagcagccagcatggccagactatgatgtgtggattcttctcacagtg
ctgagcactgtcatcgtgatcattctgatttttgttgttcgcaccaagtgtcactggaac
aggactcaggactccttgcagcagcagaccatgcaggcgatcagccagctggccatccgg
aagtaccaggcccggtgccaacaggatgccctaagggattcggccagcagctgcagctca
gcccccatctgtgctatctgtctggaggagttcagtgagggccaggagctgcggattatt
tcctgttcccatgagttccacagagagtgtgtcgacccctggctgcagcagcaccacacc
tgcccgctctgcatgttcaatatcattgagggggctgcctttgcccagcctgcgcatttg
aggcagaatccccaggatctggaacccgggcagcggcttcacctcttccggcaacaccca
ggacacgccctgtatcgcctcccagaggcccacccccagaggcggctcagaaactttgct
tcgcagctcccccatggcaaccccttcttccattccccagagctctcccagttggattta
accaccatgcactatatgccatacaggccagtgggctccatggccacatgcagccatcag
ccctctctagcccaaggcctagggaatgagcagcaccgaaaatctccagcatgtgggcag
atgccatcttctcacaggacctgcccatttcagcaccaggcccgttgcctgggattcagg
actgcggtagcaccaagacagcaccatgctgcccctcttcgtcggggaaccagtcatggg
aggcagcagaacagcagtggctcaggggagagctatctcacattgcacagtgggtacctg
gctgatggtccaggcagtgactccagctctggaccctgtcatggctcctccagtgattct
atgttgaattgcacagacgtcagccttcagggcatccatggtagctgctccaccttccgc
agctccctgagcagtgactacgacccctgggtgtactgtagctccactgacaatggccag
gagcagctgcagtctccaggggagccaaggctaaggtctttggacttgaaggagaccggc
agctctgcgttagccaagagtcagatactgactcatgtccattatcaccaccacaggcac
catcactacaggaaggacccagagtgtccatctgggagatcaggccaggaacccagccag
cataagccctggttttctggggctgtgcacagtgctcggacacaaaagaggactgagaaa
actcgtcactgcaaacagcctcttgaaagcagcccaatgtcccaggatgcatctctgtca
ggacagccctcctgtgtgcatcagggacctgacctctcaaagcacctctcctcttctgca
gatgggtctgacttcagctgggtggccagtaagcaagctggaacagctggtccattgcct
ttcccactgttacagaaacatggcttacaaagccgtcaccccagaaggaaacggaagtgc
cgcccggagcctgccctggctcacctctcagaggactcagacatgcacaaagactgcaat
gttcacattcactatggccactcccctagctactgctgctccccagacgttcagccactg
ttgccaacagcccctatgccctattgctcaggctctcaggtggtttggaagtgcctagtc
ccgccctccaacttggagtcccagcagcaggacaaggacctatcagaatgggaggggaaa
cccatgtatccagttgatttctcagggacaggcaccacagaaggcaacacgagtctttac
ctcccctgccaaactctgcaacataatcagggatccaaggaggagatccaagatgtgtac
gaacattctgtttaa
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