Natator depressus (flatback sea turtle): 142000528
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Entry
142000528 CDS
T11397
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
nds Natator depressus (flatback sea turtle)
Pathway
nds03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142000528 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nds03041
]
142000528 (PRPF8)
Spliceosome [BR:
nds03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
142000528 (PRPF8)
Complex C
U5 SnRNP specific factors
142000528 (PRPF8)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
142000528
NCBI-ProteinID:
XP_074830993
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All DBs
Position
17:complement(509571..537759)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRAGCAPVPSPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETCEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggctggagtgtttccttaccgtgcgggctgtgccccagtgcccagtcccttggctccg
ctgcctgactacatgtctgaagagaagctgcaggagaaagcccgcaaatggcagcagctg
caggcaaagcggtatgccgagaagagaaagtttggttttgtggatgcccagaaggaggac
atgcccccagaacacgtgaggaaaattatccgggaccatggtgacatgactaacaggaag
tttcggcatgacaaacgggtttatttgggtgccctgaagtacatgccccatgctgtccta
aagctcttggagaacatgccaatgccctgggaacaaatccgagatgttccggtcttatac
catatcactggtgctatctcctttgtgaatgagattccatgggtcatagaaccagtctac
atctcacagtgggggtcaatgtggatcatgatgagacgagagaagcgagacaggcgtcac
ttcaaaaggatgcggttccctccatttgatgatgaagagccccctctcgactatgctgac
aacatcctggacgtggagcctctggaggcaatacagcttgagctggacccagaggaagat
gcccctgtcctggattggttctatgaccaccagccattgaaagacaacaggaagtatgtg
aacggttctacgtaccagcggtggcaattcactcttcccatgatgtccacgttataccgg
ctagctaatcagctgctgacagaccttgtggatgacaactacttctacctgtttgatctg
aaggccttcttcacttctaaggctctgaacatggctattcctggggggcccaagttcgag
cctctggtccgagatattaacctgcaggatgaagattggaatgaattcaatgacatcaat
aaaataatcatcagacagccaatcaggacagagtacaagattgccttcccatacctgtac
aacaacctgccgcaccatgtgcacctgacctggtatcacactcctaatgtggtcttcatt
aaaacagaggatcctgacctgccagcattttacttcgatccattgatcaatcccatctct
cacaggcactctgtcaagagtcaggaacccttgcctgatgatgacgaagagtttgaatta
ccagaatttgtggagcctttcctgaaggacaccccgctgtatacggacaacacggccaat
ggcattgcactgctgtgggcccctcgaccctttaacttaagatctggcaggacacgcaga
gctctagacatcccattggtcaagaactggtaccgagagcactgcccagcagggcagccg
gtaaaagtgagggtctcctaccagaagctgctgaagtactatgttctgaatgcactcaag
cacagacctcccaaggctcagaagaagaggtacctattccgctccttcaaggcaacaaag
ttcttccagtcaacaaagctggactgggtggaggttgggctgcaggtgtgccgccagggt
tacaatatgctgaacttgctgattcataggaagaacctcaactatctccatctggactac
aatttcaatctcaaaccagtcaaaaccctcaccaccaaggaaagaaagaagtctcgtttt
ggtaatgctttccatctgtgccgtgaggttctgcgtttgaccaaactggtggtggatagc
catgtccagtacagactgggaaatgtggatgcatttcagttggcagatggcttgcagtat
atttttgcccatgtgggacagctgacaggaatgtacaggtacaagtacaaactgatgagg
cagattcgtatgtgcaaggacctgaagcatctcatctactacagatttaacactgggcct
gtggggaaggggcccggctgtggcttctgggctccaggctggagggtatggctgttcttc
atgagaggcattaccccactgttggagcggtggctgggcaacctgctggccaggcagttt
gaaggccgacactcaaagggcgttgcaaagactgtaaccaagcagcgtgtggaatctcac
tttgacctggagctgagagctgcagttatgcatgacattctagacatgatgccagaggga
atcaagcaaaacaaagctaggaccatcctgcagcacttgagtgaggcctggaggtgctgg
aaggccaacatcccctggaaggttcctgggctgccaactcctattgaaaacatgatcctg
agatacgtgaaggcgaaagctgactggtggactaacacagctcactacaacagagagcgg
atccgccggggtgccactgtggacaagactgtgtgcaagaagaacctgggtcggctgacc
aggctttacctgaaggctgagcaggagaggcagcataattatttgaaggatggcccctac
atcactgcggaggaggctgtcgcagtgtataccaccaccgtgcactggctggaaagcagg
aggttctcgcccatccccttccctccactctcctacaagcatgacaccaagctgctcata
ttggccttggaaaggctgaaggaagcctacagtgtgaaatcccgtctgaatcagtcgcag
agagaggagttgggccttattgagcaggcttatgataatccccatgaagctctgtccaga
atcaaacgacatcttctgactcagagagcctttaaagaggttggtattgagttcatggac
ctctacagtcacttggttcctgtttatgatgttgaacccctggagaagattacagatgcc
tatctggatcagtacttgtggtatgaggctgacaagcgaagactcttccctccttggatc
aaacctgctgacactgaaccacctccactgctggtgtacaaatggtgccaaggcattaat
aatctgcaggatgtctgggaaacatgtgagggtgaatgtaatgtgatgctggagtcccga
ttcgagaagatgtatgagaagattgacttgacgttgctcaacaggctcttgcgtcttatc
gttgatcataacattgctgactacatgacagctaagaacaacgtggtgatcaattacaag
gacatgaaccacaccaactcctatgggattattcgggggttacagtttgcttccttcatt
gttcagtattatgggctggtgatggacctgttggtgctgggccttcaccgagccagcgag
atggccggcccaccacagatgccaaatgacttccttagcttccaagatattgccactgag
gtggcccatcccatccgcctcttctgcagatacattgaccgcattcacatcttcttcagg
tttacagcagatgaggcaagggacttgatccagcgctacctgacagagcatccagatccc
aacaatgagaacattgtgggctacaacaacaagaagtgctggccccgagatgcccggatg
cggctcatgaaacatgatgtgaatcttggccgtgccgtattctgggacattaagaaccgt
ttgcctcgctcggtcaccacagtgcagtgggagaacagctttgtgtctgtttatagcaag
gacaatcccaacttgctgttcaacatgtgtggctttgagtgccgcatcctacccaagtgc
cgcaccagctatgaggagttcacccacaaggatggtgtgtggaacctgcagaatgaggtg
accaaggagcgcacagctcagtgctttctgcgtgtggatgatgagtctatgcagaggttt
cacaaccgagtgaggcagatactcatggcctccggctccacaaccttcacaaagattgtg
aacaaatggaacacagccctgattggcctgatgacgtatttccgggaggctgttgtgaac
acgcaggagctgcttgacctgcttgtgaagtgtgagaacaagattcagacccgaatcaaa
attggcttgaactccaagatgccaagccgcttccctccagtggtattctacactcccaaa
gagctgggggggttgggcatgctgtccatgggccatgttctcattccccagtctgacctg
agatggtctaagcagacagatgtcggaatcactcacttccgctcagggatgagccatgag
gaagaccaactgatcccaaatctgtaccgctacatccagccatgggagagtgagttcatt
gactcacagagagtgtgggcagaatatgccctcaagaggcaggaggctattgcccagaac
aggcgtctgactctggaggatctagaggactcatgggacagagggattcctcgcattaat
accctcttccagaaagaccggcacacccttgcttatgataaaggctggagggtcaggaca
gacttcaaacagtaccaggttctgaaacagaatccgttttggtggacacatcagcgccat
gatgggaagctctggaacttgaacaactaccgcacagatatgatccaagcactgggtgga
gtggaggggatcctggagcacaccctcttcaagggaacgtacttcccaacctgggagggt
ctcttctgggagaaggccagtggctttgaggagtcaatgaagtggaagaagttgacaaat
gcccaaagatcgggtttgaaccagatccccaacagacgattcaccctctggtggtctcct
accattaacagagccaatgtgtatgtcgggtttcaggtgcaactggatttgacaggtatc
ttcatgcatggcaagatccccacattgaagatttccctcattcagatcttccgagcccac
ttgtggcaaaagattcacgagagcattgtaatggatttgtgtcaagtgttcgatcaggag
ctggatgctctagagattgagaccgtgcagaaggagaccatccatcccaggaagtcctat
aagatgaactcctcctgtgcagatattctcctctttgcctcctataaatggaatgtgtca
cggccgtcgctgcttgcagactccaaggatgtgatggacagtaccaccactcagaaatac
tggattgatatccagctgcgctggggcgactatgactcccatgacattgagcgctatgca
agagccaagttcctggattacaccacggacaacatgagtatctacccctcccccactggc
gtgctcattgctattgacctggcctataacctgcacagtgcttatgggaactggttccct
gggagcaagcctctgattcagcaagctatggccaagattatgaaggcaaaccctgcactg
tacgtactgagggaacgtatccgcaaggggctacagctttactcatcagagcccacagaa
ccctatctctcctcccagaactatggggagctcttctccaatcagatcatctggtttgta
gatgacaccaacgtgtacagagttaccattcacaagacctttgaagggaacttgaccaca
aagcccatcaatggggccattttcatcttcaatcccaggactgggcagctcttcttaaag
atcatccatacatctgtgtgggcaggacagaagcgtctgggccagctggccaagtggaag
actgctgaggaagtggctgccctgattcgctccctccctgtggaagagcagcccaagcag
atcatagtcaccaggaagggcatgctggacccacttgaggtgcacttgctggatttccca
aacattgtgatcaaaggatcagagctgcagctgcccttccaggcctgcctgaaagttgag
aagtttggagatctcatcctgaaggctactgagccccaaatggttctcttcaacctttat
gatgactggctgaaaaccatctcctcctacacggcattctcgcgtctgatcctgattctc
cgggcactgcatgtaaacaatgaccgtgccaaagtgatcctgaaaccagacaagaccacc
ataacggagcctcaccatatctggcccaccctgacagatgaggagtggatcaaggtggag
gtgcagctcaaggacctgatcctcgcagactatggaaaaaagaacaatgtgaatgtggca
tctctgacgcagtcagagattcgagatattatcctggggatggagatctctgccccctct
cagcagagacaacagattgccgagattgagaagcaaaccaaggagcagtcgcagctaacg
gccacgcaaacccgcactgtcaacaagcatggtgatgaaatcatcacctccaccaccagc
aactatgaaactcagaccttctcctccaagacagagtggcgagtcagagcaatctctgct
gccaatctccacttgagaacaaaccacatctatgtctcgtctgatgacatcaaggaaaca
ggctacacctacatccttcccaagaatgtgctgaagaaattcatctgcatctcagacctc
agggcccaaattgcagggtacctgtatggtgtgagccctccagataatcctcaagtgaag
gagatccggtgcattgtgatggtgccccagtggggaactcatcagacggtgcatcttcct
ggccagttgccgcaacatgagtacctcaaggaaatggagcccctgggatggattcacacg
caaccaaacgagtctcctcagctctcgccgcaggatgtcaccacacatgccaaggtcatg
gctgacaatccctcatgggatggggagaaaaccatcatcatcacctgcagttttacccca
ggctcctgtactctgactgcctacaagctgactcccagtggctatgagtggggcaggcag
aacacagacaaaggaaacaaccctaagggctacctgccatcccactatgagagggtgcag
atgttgctgtcagaccgcttccttggcttcttcatggtaccagcacagggatcctggaac
tacaacttcatgggtgttcgtcatgatcccaacatgaagtacgagctgcagctagcgaat
cctaaggagttctaccatgaggtccatcgcccatctcacttcctcaacttcgccttgttg
caggaaggggaagtctactctgcagacagagaagatctctatgcatag
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integrated database retrieval system
