Neobacillus drentensis: L1999_01225
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Entry
L1999_01225 CDS
T08277
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ndt
Neobacillus drentensis
Pathway
ndt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ndt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1999_01225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndt03019
]
L1999_01225
03009 Ribosome biogenesis [BR:
ndt03009
]
L1999_01225
Enzymes [BR:
ndt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L1999_01225
Messenger RNA biogenesis [BR:
ndt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L1999_01225
Ribosome biogenesis [BR:
ndt03009
]
Prokaryotic type
rRNA helicases
L1999_01225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ULT57276
LinkDB
All DBs
Position
232177..233667
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AA seq
496 aa
AA seq
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MTKFEELGISQATLKAVLKMGFEEATPIQSETIPLGLKGIDLIGQAQTGTGKTAAFGIPL
VEKVDTKRDAIQGIIIAPTRELAIQVSEELYKIGAGKRVRVLPIYGGQDISRQIRSLKKA
PHIIVGTPGRVLDHINRKTMRLDTVNTVILDEADEMLNMGFIEDIESILAATPAERQTLL
FSATMPAPIQRMAEKFMKEPQIVRVKTKEMTVPLIEQYYIEVQERNKFDVLTRLLDIQSP
ELAIVFGRTKRRVDELSEALTLRGYTAEGIHGDLTQAKRMSVLRKFKEGTVDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFITPREKSYLAVVEKTTK
RKMERMQAPTLDEALEGQQRAVVDKIVQTIESNNLHYYKAAAQELLDGNDAQTVVAAVLK
MLTKEPDTTPVKLTEESPLPQKRDRKQFDRGDRRRRDDSRGSYNSDRNRKKAPVKPRSGE
KRTGGKTSKPRSYNHQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaagtttgaagaattaggcataagtcaagccaccttaaaagctgtccttaaaatg
ggttttgaggaagctacaccaatccaatccgaaaccattccgttggggctaaaaggtata
gatttgatcgggcaagctcaaacaggaactggtaaaacagctgcttttggtattccgttg
gtggaaaaagttgatacaaaaagggatgccattcaagggattattattgcgccaactcgt
gaattagcgatccaggtttccgaagagctctataaaattggggcaggaaaaagagtccgc
gtactgccgatttatggtggtcaggatattagccgccaaatccgctcattaaagaaagct
ccacatattattgttggtacccctggacgggttctagaccacattaatcggaaaacaatg
cgtttagataccgtgaatacggttattctggatgaagcagatgaaatgttaaacatggga
ttcattgaggatattgaatcaattcttgctgcaacaccagcagagcgtcaaacactattg
ttctctgcgacaatgccagcaccaattcaaagaatggcagaaaaattcatgaaggagccg
caaattgttcgtgtaaaaacgaaagaaatgaccgttcctttaattgaacaatattacatt
gaagtgcaagaaagaaataaatttgatgtattaacaagacttcttgatattcagtcacct
gaacttgcgattgtctttggccggacaaagcgccgtgtcgatgaattatcagaagcattg
acgttaagaggatatacagcagagggtattcatggcgatttaactcaggcaaagcgtatg
tcggtccttcgaaagtttaaagagggaacagtggatgttcttgttgcaacagacgtagcg
gcaaggggtctagatatttccggcgttacacatgtatataattttgatattccgcaggat
ccagagagctacgttcaccgtattggacgtactggccgtgccggaaagactggtgttgcg
atgactttcatcacaccacgtgagaaatcttaccttgccgttgtggaaaaaacaacgaag
aggaagatggaaagaatgcaggctccaacccttgatgaggctttggaaggtcaacagcgt
gcagttgtagataaaattgtgcaaacaattgaatccaataaccttcattattacaaagca
gcagcacaagaattattagatggcaatgatgctcaaaccgttgtggctgcagtcttaaag
atgttaacaaaagagccggatactactcctgttaaattaacagaagaatctccacttcca
caaaaaagagatagaaaacagtttgatcgtggagaccgtcgtagaagagatgactctaga
ggttcatacaactctgatcgcaaccgaaaaaaagcaccggtaaaaccaagaagcggtgaa
aagcgaactggcggtaagacatcaaagccaagaagttataaccaccaataa
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