Neobacillus drentensis: L1999_04365
Help
Entry
L1999_04365 CDS
T08277
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ndt
Neobacillus drentensis
Pathway
ndt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ndt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1999_04365 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndt03019
]
L1999_04365 (recQ)
03400 DNA repair and recombination proteins [BR:
ndt03400
]
L1999_04365 (recQ)
Enzymes [BR:
ndt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1999_04365 (recQ)
Messenger RNA biogenesis [BR:
ndt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L1999_04365 (recQ)
DNA repair and recombination proteins [BR:
ndt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L1999_04365 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_Sgs1
PCI
UPF0122
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ULT57800
LinkDB
All DBs
Position
921110..923236
Genome browser
AA seq
708 aa
AA seq
DB search
MFDQALSLLKTHFGYSSFRNGQEQAIRSVLTGQNTICVMPTGGGKSICYQIPALVLPGTT
IVISPLISLMKDQVDTLIQAGIPATFINSSLSYSEANSRINEAKQGKYKLLYIAPERLES
YEFSEDLRQMDIPLVAVDEAHCISQWGHDFRPSYRHIRQMVANLPQKPVVLALTATATPR
VREDICDSLEIDQANTIITGFERVNLSFSVIKGQDRLKYLLDYLKKNQQESGIIYAATRK
NVDQLYERLRKEQINVARYHAGMGDADRAREQERFLEDKASVMVATSAFGMGIDKSNIRY
VVHFQMPKNMESYYQEAGRAGRDGLDSQCILLYSPQDVQVQRFLIDQSSDRNRMTQELEK
LQQMADYCHTENCLQEFILKYFGETETESCGRCGNCLDSRSRIDVTKEAQMVLSCVIRMG
QRFGKNLTAQVLTGSKNKKVTELGFDRLSTYGIMKNQGAKEVGDFIEFLISQELIAIEQG
QYPTIFVAAKGKEVLLGSQQVYRREAVQVKEVSKNDPLFEYLREVRKRIAETENVPPFVI
FSDAALKDMCAKQPKTNEEFLQVSGVGEHKLQKYGLEFIQAIRKFLEENPEYQSEEVPAS
NPPKKSAKRAVRDSHLETYSLYNENLSLNEIAEKRDLSLKTVEEHIIQCAQQGMEVEFTE
LIPGEYLPLLEQAVEAAGRSRLKPIKELLPEEVSYFMIKAYLYFLSKK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgatcaagcactttccctattaaaaactcacttcggttacagctctttccgaaac
ggtcaggagcaggcgatccggtcggtcttaacaggccagaataccatttgtgtcatgccg
acaggcggtggtaaatcgatttgttatcaaattccagccctcgtccttccaggtaccaca
atcgtcatatccccattaatttccttaatgaaggatcaagttgataccctcatccaagca
ggaatcccagccacatttattaatagctcgttaagttattccgaagccaattcgagaatc
aacgaggccaaacaggggaagtacaagcttttgtacatagcgccggaaagattggaatcc
tatgaatttagcgaggacctaagacagatggacatcccattagtggcggtggatgaagcc
cactgtatctctcaatggggacacgatttccgaccaagctatcgtcatattcggcagatg
gttgctaacctgcctcaaaaaccagttgtactcgcccttacagcaaccgcaacaccaagg
gttcgggaagatatttgtgattctctcgaaatagatcaagcgaatacgatcatcaccgga
tttgaacgagttaacttatctttttctgttatcaagggtcaggaccgtcttaagtatctt
cttgattacttaaaaaagaatcagcaagaatccgggattatttatgcggctacacggaaa
aatgttgatcagctatatgaaagactgcgtaaggaacaaatcaatgttgcccgctatcat
gccgggatgggtgatgcagaccgagcacgggaacaggaaagatttttagaagataaagca
tccgtgatggtagctacctcagcgtttggcatggggattgataaatccaatatccgctat
gtagttcactttcagatgccgaagaatatggagagctattatcaagaagcaggccgtgcc
ggccgggatgggttagacagtcaatgtattttgttgtattctccgcaggatgtccaagtt
cagcgtttcttaattgatcaatcaagtgatcgaaacaggatgactcaagaactagaaaaa
ctgcagcaaatggcggattattgtcataccgagaactgtctgcaggaatttattttaaaa
tattttggtgaaacagaaacggaaagctgcggaagatgcgggaactgtttggattcaagg
tccagaattgatgtaaccaaagaggcacaaatggtgctgtcgtgcgtgattcgaatgggg
cagcgttttgggaaaaacttaactgcccaagttctaacgggttctaaaaataaaaaagtt
actgagctgggttttgataggttaagtacgtatggaatcatgaaaaatcagggtgctaaa
gaagtgggggattttatcgaattcctgatttcacaagaattaattgcgattgagcaagga
caatatccgaccatctttgtcgctgcaaaaggtaaggaggtcctcttaggcagccagcag
gtctaccgaagagaagctgttcaggtcaaagaagtttcgaaaaacgatccgctatttgaa
tacttgagagaagtacgcaagcgaattgctgaaacggaaaatgtaccgcctttcgtcatc
ttttcggatgcggcacttaaagatatgtgtgccaaacagccaaaaaccaacgaggaattt
ttgcaggtgagcggagtaggggagcacaagctgcaaaagtatggtctggaatttattcaa
gctattcgtaagtttcttgaggagaatccagagtatcaaagtgaagaagtaccagcatcg
aatccaccgaaaaaatcggccaaaagggcggttcgtgattctcatttagaaacgtatagc
ttatataatgagaatctgtctttaaatgaaattgctgaaaagagggacttatctctcaaa
acggttgaggaacatatcatccaatgtgcacagcaggggatggaggtggaatttacggaa
ctcattcctggggaatatctgccattactagagcaggctgtggaagcagcaggaagaagc
cgcttaaaaccgattaaggaacttctgcctgaagaagtcagttactttatgattaaagca
tatctttattttttaagtaaaaaataa
DBGET
integrated database retrieval system
