Neobacillus drentensis: L1999_04745
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Entry
L1999_04745 CDS
T08277
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ndt
Neobacillus drentensis
Brite
KEGG Orthology (KO) [BR:
ndt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ndt03009
]
L1999_04745 (rlmD)
Enzymes [BR:
ndt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
L1999_04745 (rlmD)
Ribosome biogenesis [BR:
ndt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L1999_04745 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
MTS
Cons_hypoth95
Methyltransf_15
Methyltransf_11
PrmA
Ubie_methyltran
TehB
UPF0020
Methyltransf_12
Methyltransf_4
TRM5-TYW2_MTfase
TPMT
Motif
Other DBs
NCBI-ProteinID:
ULT57870
LinkDB
All DBs
Position
1000944..1002332
Genome browser
AA seq
462 aa
AA seq
DB search
MKTEQGIKIQLKQTFPLTIKRLGINGEGVGYFKKQVVFVPGALPGEEVVVEATKINPKFA
EAQIKKIRVKSPHRVQPPCPVYEQCGGCQLQHLQYGQQLKEKRDIIIQSLERHTKLNVAK
LDIRETIGMENPWGYRNKSSFQVVQKNGKVLAGLYGMNSHQLIDIEHCAVQHSQTNEAVT
TVKSILQDLQIPIYNEKTRKGIVRTIVARVGVETGELQVVLITTQNDLPKKVSIIEEIQK
RLPKVKSIVQNINGEKTSLIFGEETLALAGEEFIQETLGDLQFELSARTFFQLNPIQTVK
LYDEVKKAADLTGNEKVLDAYCGVGTIGLWLADQAAEVRGMDVIPESIDDAKKNAKRHGF
TNTKYVPGKSEEVLPKWVKKGWKPDVIVVDPPRTGLDNQLLQTILQVKPEKLIYVSCNPS
TLAKDIQTLSAKFEVKYIQPVDMFPHTAHVECVSQLILKEGS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgaacaaggtattaaaatacaattaaaacaaacctttccgttaaccatcaaa
aggctcgggatcaatggagaaggcgtgggttattttaaaaagcaggtcgtttttgtgcca
ggtgctcttcctggtgaagaagtggtcgtagaggcaaccaaaattaaccccaaatttgcc
gaggcacaaattaaaaaaattcgtgtaaagtcacctcatcgtgttcagccaccctgtccg
gtttacgagcaatgcggcggctgccagttacagcatttacaatatggccagcaattgaaa
gaaaaacgcgatatcattattcaatccctggaacggcatacgaagctgaatgtggctaaa
cttgatatccgcgaaacgattgggatggaaaatccttggggttaccggaataaaagcagt
tttcaggtagtacagaaaaatggcaaagtcttagctggattatatggcatgaattcacac
cagcttattgatattgagcattgtgcggtccagcattcgcaaacaaatgaagcggtaaca
actgtaaagtcgatcctccaagacttgcagatccctatatataatgaaaaaactagaaaa
ggaattgttagaacgattgttgcacgtgtaggtgtggaaacaggcgagctgcaggtagtc
ctgattaccacccaaaatgatttgcctaaaaaggtatctattattgaggaaatccaaaaa
aggctccctaaagtgaaatctattgttcaaaacataaatggtgaaaaaacctcattaatt
tttggagaagaaactctcgcgctggcgggtgaagaattcattcaggaaacactaggagat
cttcaatttgaattatcagcaagaacgttctttcagctgaaccctattcaaaccgtcaag
ctttatgatgaagtgaaaaaagccgcagacctgacaggaaacgagaaggtccttgatgct
tactgtggtgttgggacaattggattatggcttgctgaccaagcggcagaggtccgcgga
atggacgttatccctgaatcgattgatgatgctaagaaaaatgccaagcgtcacgggttt
actaatacaaaatatgtcccgggtaaatcggaagaggtattgccgaaatgggtcaaaaaa
gggtggaaaccggatgtgattgtggtcgatccaccaagaaccggactagacaatcagctc
cttcaaaccattttgcaggtgaagccagagaagcttatttatgtatcttgtaatccttct
acgttagcaaaggatattcaaactttaagtgcgaagtttgaggtgaaatatattcaacct
gtggacatgttcccgcatacggcgcatgtagagtgtgtttcacaactcattttaaaagaa
ggaagctaa
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