Neobacillus drentensis: L1999_05235
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Entry
L1999_05235 CDS
T08277
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ndt
Neobacillus drentensis
Pathway
ndt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ndt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1999_05235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndt03019
]
L1999_05235
Messenger RNA biogenesis [BR:
ndt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L1999_05235
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ULT57958
LinkDB
All DBs
Position
complement(1114214..1115887)
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AA seq
557 aa
AA seq
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MVSTENALSIFALGGINEIGKNMYVVQYGDDIFIIDCGGKFPDESLLGIDLIIPDMTYLE
ENQDKIRALIVTHGHEDHIGGIPYFLRKLNVPIYATRFTLGLIELKIDEHRLRGDSKLIT
IDSNSRLEFDKIEISFFKVSHSIPDCLGIVFHTPEGNVVHTGDFKFDLTPANNQYADIHK
MAEIGQQGVLVLISESTNAERKGLTPSEQMVGSHMDEAFIKAKGKIFISTFASNVNRVQQ
VVESALRTNRKLALLGRSMVNVVDVAIERGYLNVPEGMLIDASEVDKLPAEKVAILCTGS
QGEPMAALSRLASGNFRDVAIYPGDTVVLAASPIPGNEKDVSKIIDNLFLLGAKVIYGSG
STTGMHVSGHGYQEDLKLMLTLMKPTYFIPIHGEYRMLHHHRMLAESVGVEKANTFIIKN
GEVVEFKNGAARQTQSVPAGDTYVDGIGVGDVGDIVLRDRKQLSEDGMLVIVISISKGDR
KIISGPDTITRGFVYARDSDELLKEVNRLVKKTVNDMQAENIRQWNVMKQNIKKSVGQYL
FAQTKRKPMILPIIIEI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtatccaccgaaaacgcattatccatttttgctcttggcggtattaatgaaatcgga
aaaaacatgtatgttgttcagtatggagacgatatttttattattgattgtggtggtaaa
ttccctgatgaaagcttactggggattgatttaattattcctgatatgacctatttagag
gagaatcaggacaaaattagagccttaattgtaactcatggacacgaagaccatattggc
gggattccctatttcttaagaaagttaaatgtacctatttatgcaacccgctttacactt
ggattaattgaattaaaaattgatgaacatagactaagaggggattccaaacttattacg
atcgactccaattccagattggaattcgacaagattgagatttccttttttaaagtaagc
catagcatacccgactgcctcggaattgtctttcatacacctgaagggaatgtggttcac
acaggtgatttcaaatttgatttaacaccggccaacaaccaatatgccgatatacataaa
atggctgaaataggccagcaaggggtcttagttttaatatcggagagtactaatgcagaa
cgaaaagggctaacaccttctgagcagatggttggttcccacatggacgaagccttcata
aaggctaaagggaaaatctttatctcgacatttgcatcgaatgtcaatcgggttcagcaa
gtggttgagtcagcgttgaggaccaatcgtaaactggcattgctaggccgcagtatggtg
aacgttgtggatgttgccattgaacgcggttatttaaatgtgccagaagggatgttaata
gacgctagtgaagtagataaacttccggctgaaaaggtagctattctttgtacaggcagt
caaggggaaccaatggcagccttatcccgattagcaagtgggaacttccgtgatgtcgcg
atttaccccggagatacggtggttttagcagcttccccaattccaggaaacgaaaaggat
gtttcaaaaattatcgataatttatttctgcttggagctaaggtcatctacggttctggc
agcacgaccggaatgcatgtttcgggacatggatatcaagaagacctcaagctgatgctc
actttaatgaaaccgacctatttcattcctattcatggtgaatatcgtatgctgcatcat
caccgtatgttagctgaatcagttggagtggaaaaagccaatacctttattattaaaaat
ggagaggttgtcgagttcaaaaatggtgctgcccggcagacccaatctgttccagctggg
gatacatacgtggatggcattggtgttggcgatgttggcgacattgtgttacgggataga
aaacagttgtctgaagatgggatgctcgttattgtcatttcgattagcaagggagaccgg
aaaattatttctggaccggatacgattactcgagggtttgtttatgcaagagactcggat
gagctccttaaagaagtcaaccgtcttgttaaaaagacagtgaatgatatgcaagccgag
aatattcgccaatggaatgtaatgaaacaaaacattaaaaagtcggttggacagtattta
tttgcccaaaccaaacgaaagccaatgattcttccgattattattgaaatttag
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