Neobacillus drentensis: L1999_06080
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Entry
L1999_06080 CDS
T08277
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ndt
Neobacillus drentensis
Brite
KEGG Orthology (KO) [BR:
ndt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndt03400
]
L1999_06080 (addA)
Enzymes [BR:
ndt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1999_06080 (addA)
DNA repair and recombination proteins [BR:
ndt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
L1999_06080 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ULT58098
LinkDB
All DBs
Position
1279496..1283275
Genome browser
AA seq
1259 aa
AA seq
DB search
MNSLVIPPKPEGVTWTNDQWKAIAARDKDILVAAAAGSGKTAVLVERIIQKILSKEEPID
VDQLLVVTFTSASAAEMRHRIGEALEKAIDQNPESRNLRKQLSLLNKATISTLHSFCMEV
IRKYYYLIDIDPGFRIADVTEAQLIRDEVMEELFEEEYGKKDNEAFFNLVDSFTSDRSDA
ALMDIVRSIYDFAQSNPLPDSYLEKIISMYQVEEIASIEDLPFIEALLFDSKLQLEAAKE
MIEQALELTKLPTGPAPRAENFLDDLQVIDTLISAEQDSWNTLYQAMQTWSFTRAKQVKG
DHYDKELTEKAQKLRDKAKKKIQGIKDELFSRRPEGFLRDMVEMRPLIETLVYLVKEFSS
RFAKAKQEKGLVDYNDLEHFCLAILTEGVSEEGEFLPSEAALAYRLHFKEVYCDEYQDTN
MVQETILKLVAKDEEENGNLFMVGDVKQSIYRFRLAEPQLFLSKYNRFTVDGSSSGLRID
LAQNFRSRKEVLDATNYLFKQIMGVKVGEIRYDEAAELRNGAPYPEDREFPVEMMLIDQN
AESHKAEEVETGDETDLVEFDTADLEQSQLEARVIAAKIKELISAGAPVYNAKTKTERPL
MYRDVVILLRSMTWAPQFMEEFKQQGIPIYANLSTGYFEATEVSIMLSLLRVIDNPYQDI
PLASVLRSPIVGLNEEELSKIRIGRKSGSFWEAVTAFCLSKTAEVNENFYEKVRAFFDLL
KEWRAVARQGSLSELIWQVYRDTQFYDFAGGLPGGKQRQANLRALYDRARQYEQTSFRGL
FRFLRFIERMMDRGDDLGAARALGEQEDVVRIMTIHSSKGLEFPVVFMAGMARNFNMTDI
RKPFMLDKELGFAAKYVNAEKRISYPSLPQIAFKQKKRMEMLAEEMRVLYVAMTRAKEKL
YVTATLKDAGKQIDKWKDVSSHNEWLLKDYERASATSYMDWIGPALIRHRDSSGLREAGE
ENWQVTPEISNHPSSWKITLQHADEIKKQAISIENEEDQLLKKVENLEQVPSESNLADEI
HARLTWEYPFLGAASHRSKQSVSEIKRTRELTDEYSSTELLGRFRKSILKRPKFMQEKQL
SPAERGTAMHMVMQHVDLKKEVNEKEIGEQLNWMVNNELLTPEQSEVIDAKLISQFFTSP
LGQRIFKAKAVHREVPFTVSLPAHDVYPDWNEGDESVFVQGIIDCILEDENGLVLIDFKS
DGITDRYKGGFPQAKEILEKRYKLQINLYTKAIEQIWKRNVTERYLFFFDGAHILKLEK
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtcttgtgattcctccgaagcctgaaggggtaacctggacgaacgaccagtgg
aaggctattgcagctagagataaggatatccttgttgcggctgccgctggttcggggaaa
acggcagtactggtcgaaagaatcatccaaaagatactctctaaagaagaaccaatcgat
gtggatcagttactagtggttacgtttacgagtgcttccgcggcagagatgagacaccga
attggagaagcgctagaaaaggcaatagatcaaaatccagagtcaagaaatttacgaaaa
cagcttagcctattaaataaggcaaccatttcgacgctgcattctttctgtatggaagtt
atccgtaaatattattatttaattgatattgaccctggtttccgcatcgctgatgtaaca
gaggcccaattaattagagatgaagtgatggaagaattatttgaagaggaatatggaaaa
aaagataatgaagcattttttaatttggtcgattcgtttacaagtgaccgaagtgatgcg
gccttaatggacattgttcgttccatttacgactttgctcagtccaatcctcttccagac
agttatttggagaaaattatttctatgtaccaggtggaggaaattgcgtcgatcgaggac
cttccttttattgaggcacttctttttgatagtaaacttcaattagaagcggctaaagaa
atgattgagcaagcgctcgagcttacaaagctgccaactggaccggcacctcgtgcagaa
aactttttagatgatttacaggtcattgacaccttaatttcagccgaacaggattcatgg
aacacgctttaccaggccatgcaaacctggtctttcacaagggctaaacaggtaaagggt
gatcactatgataaggaattaacagaaaaggcccagaaactgcgggacaaggctaagaaa
aaaattcaaggtataaaggatgaactcttttcacgacgtcctgaaggctttttacgggat
atggtagaaatgcgtccattaatcgaaacactagtctaccttgtaaaagagttttccagc
cggtttgcaaaggcaaaacaggaaaaaggactggtcgattataacgacctggaacatttt
tgtcttgctattttaacagaaggagtttcggaggaaggtgaattccttccatcagaggca
gctctcgcgtatcggcttcattttaaggaagtttactgcgatgagtaccaagatacgaat
atggtacaggagaccattttgaagctggtggcaaaggatgaggaagaaaacggcaatctt
tttatggttggggacgtaaagcagtctatttaccgttttcgcttagcagaaccacagctt
tttctttccaaatataatcgtttcacagtggatgggtcctcatccggactccgaattgat
ttggctcaaaacttccgaagccggaaagaggtccttgatgctacaaattatctctttaaa
cagattatgggggtcaaggtaggagaaatccgttatgatgaggcggctgaacttcgaaat
ggtgcaccatatcctgaagatagagaatttccagtagagatgatgctcattgaccaaaat
gcggaaagtcataaggcggaagaagtggaaacaggcgacgaaacagatttagtagaattc
gacacagccgatcttgaacaatcacagttagaggcaagggtgattgctgctaaaattaag
gagctgatcagcgctggggcccctgtatataacgccaaaacaaaaacagaaagaccttta
atgtatcgggatgtggtaatccttctccgctcaatgacatgggcaccgcaatttatggag
gagttcaaacaacaaggaatccccatttatgccaatttatcaaccggttattttgaagca
acagaagtatccattatgttgtcacttcttagggttattgataatccgtaccaagatatt
ccccttgcctctgtcttgcgttccccaattgttgggttaaacgaggaggaactgtcgaaa
attcggatcggcaggaagagcggttcgttttgggaggctgttaccgccttttgtttaagt
aaaacagctgaagtgaatgaaaacttttatgaaaaggttcgtgctttttttgacttgtta
aaagaatggcgagcggtagccagacaaggttcactctcagaactgatctggcaggtatat
cgtgacactcaattttatgactttgctggcgggctgcctggcggtaagcagcggcaggca
aatttacgcgctttatatgacagggcccgtcaatatgagcagacatctttccgcggattg
tttcggtttttgcgatttattgagcgcatgatggatagaggagacgatctcggcgcggct
agagcacttggtgagcaagaggatgttgtccgaatcatgaccatccatagcagtaaggga
ttggaatttcccgttgtatttatggcgggaatggcacggaattttaatatgactgacatt
cgtaaaccatttatgcttgataaagagcttggatttgcagcgaaatatgtgaatgctgaa
aaacgaatttcttatccatcactgcctcaaattgcctttaaacagaagaaaaggatggaa
atgctcgctgaagaaatgcgcgtgttatatgtggcaatgacaagagcaaaagaaaagctg
tatgtgaccgcaacattaaaagatgccggaaaacaaatcgacaagtggaaagatgtttcc
tcccataacgaatggctattgaaggattatgaaagagcttctgccacgagttatatggac
tggattggacctgcactcatccgtcatcgtgattctagcgggctaagggaagcgggtgag
gaaaattggcaggtaacgccggagatttcaaaccatccttcttcctggaagatcacgttg
caacatgctgatgaaataaaaaaacaggctatttccattgaaaatgaagaggatcaactg
cttaaaaaagttgaaaatttagagcaggtgccatctgaatcaaacctagcagatgaaata
catgcccggcttacttgggaatatcctttccttggtgctgccagccatcgttcaaagcaa
tctgtttctgaaataaaacgtacccgggaactaacagatgaatacagcagtacagaactc
cttgggcgttttcgaaagtccatcttgaaacggcctaagttcatgcaggagaaacaatta
agccccgctgaacgtgggacagccatgcacatggttatgcagcatgtagatttgaagaaa
gaagtgaatgaaaaagaaattggtgaacagttaaactggatggtaaacaatgaattatta
actcctgaacaaagtgaagtaattgatgcaaaattaatttctcaattttttacttcaccg
ctcggacagaggatttttaaagctaaagcggttcatcgggaagttccttttacggtttcc
ttacctgcacatgatgtttatcctgattggaatgagggggatgaatcagtgttcgtacaa
gggattatcgactgcatccttgaggatgaaaatggccttgtgttaatagattttaaatct
gatggaataactgacaggtataaagggggctttcctcaagccaaggaaatccttgaaaag
cgttataaattacaaattaacttatacacaaaagcgatagaacagatttggaaaagaaat
gtgacggaacgatatttatttttctttgacggtgcacacatcttgaagctggaaaaatga
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