Neobacillus drentensis: L1999_07865
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Entry
L1999_07865 CDS
T08277
Symbol
rnjA
Name
(GenBank) ribonuclease J1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ndt
Neobacillus drentensis
Pathway
ndt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ndt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1999_07865 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndt03019
]
L1999_07865 (rnjA)
Messenger RNA biogenesis [BR:
ndt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L1999_07865 (rnjA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4453
Motif
Other DBs
NCBI-ProteinID:
ULT58427
LinkDB
All DBs
Position
complement(1690811..1692478)
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AA seq
555 aa
AA seq
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MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL
VKNEEKIKGLFVTHGHEDHIGGIPYLLREINIPIYGGKLALGLIKNKLEEHGLLRNAKLI
EIKEDDIIKFRKTSVTFFRTTHSIPDSYGIVVKTPPGQIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEIPDFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQQ
VVEAAVVNGRKVAVFGRSMEAAINIGLELGYIIAPKETFIESNQINRLPADKVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGAEVIHGKL
SNIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHAKLAIDCGVEEENCFIMDNGE
VLALSDSTAQVAGKIPSGSVYIDGSGVGDIGNIVLRDRRILSEEGLVVVVVSINMKEFKI
SSGPDLISRGFVYMRESGDLINDAQNLITKHLNKVMERKTSQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtaaaaaatgatcaaactgctgtttttgccttgggtggtttaggggaaata
ggcaaaaacacctatgcagttcagttccaagatgaaattatattaatcgacgccggtatt
aaattcccggaggatgaattattagggatcgattatgttatccctgattacacttattta
gttaaaaacgaagaaaaaattaaaggattatttgtaacccacggacacgaagaccacatt
ggcggtatcccttatttacttcgtgaaataaatattccgatctatggcggcaaacttgcc
cttgggttaattaaaaataaattagaagagcacggattattacgaaatgctaaactgatt
gaaataaaagaagacgatatcattaagttccgcaaaacatccgtaacgtttttccgtact
acccacagtattcctgattcctatggtattgttgtaaaaacccctccaggacaaatcgtc
catacaggtgattttaaatttgattttacccccgtaggtgaaccagctaatttaaccaaa
atggctgaaataggtaaggaaggggttctatgcctgctatcggatagtacaaacagtgaa
attcctgatttcacaatgtccgagcgccgtgtgggtgaaagcatccatgatatttttaga
aaagtggatggccggattatctttgcaacctttgcatcaaacattcacagactacagcaa
gtagtagaagcagcagttgtgaacggaagaaaggttgctgtgtttggccgcagcatggaa
gcggctattaatatcgggcttgaattaggctatattattgctcctaaagaaacatttata
gaatcaaatcaaattaaccgattacctgccgataaagtgacaatactttgtacaggcagt
cagggcgaaccaatggcggccttatcgaggattgcaaatggaacccacagacaaattcaa
attattcctggtgatactgtagtcttctcgtcctctccgattcccgggaatacgattagt
gtaagtaggaccataaatatgttgtaccgcgccggggctgaagtaatccatggtaagtta
agtaatatccatacttctggacacggtggacaagaagaacaaaaattaatgttgcgcttg
attaagcctaaattctttatgcctattcacggtgaatatcggatgcaaaaaatgcatgcc
aagcttgcgattgattgtggggttgaggaagaaaattgttttattatggacaacggtgaa
gtactggctctatccgacagtacagcacaagttgctggaaaaatcccttccggttcagtc
tatattgatggcagtggtgtaggcgacatcggcaatattgttttaagggatcgccgaatt
ctttcagaagaaggcttagtcgtggtagttgttagtatcaatatgaaagaatttaaaatt
tcatcaggacctgaccttatttcccgaggatttgtctacatgagggaatcaggcgattta
attaatgacgctcagaacctgatcaccaaacacttaaataaagtgatggaacgaaaaacg
agccaatggtctgaaattaagaatgagattactgatacacttgcacctttcctttatgaa
aaaacaaaacgcagaccaatgattttaccaatcattatggaagtataa
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