Neobacillus drentensis: L1999_16355
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Entry
L1999_16355 CDS
T08277
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ndt
Neobacillus drentensis
Pathway
ndt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ndt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
L1999_16355
09124 Replication and repair
03420 Nucleotide excision repair
L1999_16355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndt03021
]
L1999_16355
03036 Chromosome and associated proteins [BR:
ndt03036
]
L1999_16355
03400 DNA repair and recombination proteins [BR:
ndt03400
]
L1999_16355
Enzymes [BR:
ndt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
L1999_16355
Transcription machinery [BR:
ndt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
L1999_16355
Chromosome and associated proteins [BR:
ndt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
L1999_16355
DNA repair and recombination proteins [BR:
ndt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
L1999_16355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
zf-piccolo
PhoH
Motif
Other DBs
NCBI-ProteinID:
ULT54719
LinkDB
All DBs
Position
complement(3473302..3475578)
Genome browser
AA seq
758 aa
AA seq
DB search
MASDIHISVRTLVEHVFKSGSIDARFRSQTALLDGTRIHQKIQKNYQDGDLKEVLVSTEI
EYDGLTFTIDGRCDGLLFHDDKIIIDEIKSFSQPLDQLEAEGYPVHWAQAKMYAYIVALD
KELEEIDVQLTYVHVETEEKKSLRQTYTFLELTRFVMEVIASYAPYAKLLNDHRLKRNES
CRELAFPFKTYRNGQRKLAGAVYKTIVDKKNLFAKAPTGIGKTISTLFPAMKAIGEGELN
RIFYLTAKTITRTSAEEAFARMESCGLCSKTVTITAKDKVCFQEETNCQKDICEFANGYY
DRINDAILDILSNENHLTRKVIESYARKHTVCPFEYSLDLAYSVDAIICDYNYIFDPRVS
LKRLLEEQKKSTALLVDEAHNLVDRGREMFSASLSKEPFLQLKKEYKGLNQSIYEAASKM
NAWFIQLKKSHESQKEFVLEQLEEDFLEEIRQFAMISEQVLQLDTSPSLLETYFKVNQFI
KIAELLNDHFIIYAEKERNDLKIKLFCLDPSKLLQQMGKGFRAKIFFSATLSPLRYYQDI
LGGTEEDYTLNIPSPFSEEQVEVFIKPLSTRYRDREQTKNAIVTVIQSMLTRRPGNYLIF
FPSYQYLLDVYEQFKQADDTTQTLIQEAGMTESKREDFLAAFKPDQTETLVGFAVLGGIF
SEGVDLIGDRLNGVVIIGVGLPQLCFERNLIKDHFASLGKNGYDYAYVYPGINKVLQAGG
RLIRSEQDHGTIVLIDDRFLQRQYQQLLPIEWRQFTLI
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagtgacattcatatatcagtaagaacacttgtagagcatgtttttaagagcggc
agtattgacgcacggttccgttcgcaaacagctctgttggatggaacacggatccatcaa
aaaattcaaaagaactatcaagatggtgatctgaaggaagtattggtaagtaccgagatt
gagtatgatggtctcacattcacgattgatgggagatgcgacggtcttttattccacgat
gacaagatcatcattgacgaaattaaatccttttcccagccacttgatcaactggaagca
gaaggctatcctgttcattgggctcaagctaaaatgtatgcctatatagtggcattggac
aaggaactggaagaaattgatgtccagttaacctatgttcacgttgaaacagaagagaaa
aaatcacttagacagacgtatacatttttagagcttacgagatttgtcatggaggtcatt
gcaagctatgcgccctatgccaaattgctgaatgaccatcgtttgaaacgaaatgaaagc
tgtagagaactagcatttccgtttaaaacgtaccgcaatggacagagaaaattagcagga
gctgtttataagacgatcgtcgacaaaaagaatttatttgcaaaagccccaacgggaatt
ggaaaaaccatctctaccctctttccggccatgaaggcaatcggtgaaggagagctaaac
cgaattttctatcttactgccaaaacgattacccgaacgtcggcggaagaagcgtttgcg
aggatggagtcctgcgggctttgttccaagaccgttaccattacggcaaaagacaaggtt
tgtttccaagaggaaaccaattgtcaaaaggatatttgtgagtttgcaaatggttattat
gatcggattaatgatgcgatattagatattctctcaaacgaaaaccaccttacacgtaaa
gtgattgaaagctatgcccggaagcatacagtctgcccgtttgaatattcccttgatctc
gcctattcggttgatgccattatttgtgattataattatatctttgacccgcgtgtctca
ttaaaacgattgttagaagagcaaaagaaatcaaccgctctattggtggatgaagcgcat
aatcttgtcgaccgcggccgggagatgttttctgcctctttaagcaaggagccttttctc
caattgaaaaaggaatataaaggattaaatcagtctatatacgaagctgccagcaaaatg
aatgcctggttcattcaattaaaaaagagccatgagagtcaaaaggaatttgttttagaa
cagttagaggaagactttttagaagaaatccgccaatttgcgatgatctcagaacaagtt
ctgcaactcgatacttcaccatcgttactggaaacttattttaaggtcaaccaatttatc
aaaattgctgaattactcaatgaccatttcatcatttatgcagaaaaagaacggaatgat
ctaaaaattaaactgttttgtttggatccatccaagctgcttcagcaaatgggaaaggga
ttccgcgcaaagatatttttctccgcaacactttcgccgctgcgctattatcaggatatt
ttgggcggcactgaagaggattacaccttaaacatcccctcaccgtttagtgaagagcag
gtagaagtttttattaaaccattgtcgacccgataccgggatcgcgaacaaacgaagaat
gcgatcgttaccgtcattcaatcgatgctaacaagacgaccgggaaattacctgattttc
tttccatcctatcaatatttactggacgtttacgaacagtttaaacaggccgatgatacc
acccaaacactcatccaagaagcagggatgacggagagtaaaagagaagactttttagct
gcatttaaaccggaccaaaccgagacattggttggatttgccgttcttggagggattttt
tcagagggtgttgatttaattggcgatcgtttaaatggtgtagtcatcatcggagtaggc
ttaccgcagctttgtttcgaaagaaatctgatcaaagaccattttgcttcccttgggaag
aatggctatgattatgcctatgtgtatccggggattaacaaagtgttacaggcgggcgga
agattgattcgctctgaacaggatcatgggacgattgttttaatcgacgatcgcttctta
caaaggcagtatcaacagttattgccgattgaatggagacaatttactctcatttaa
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integrated database retrieval system
