Neobacillus drentensis: L1999_19010
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Entry
L1999_19010 CDS
T08277
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ndt
Neobacillus drentensis
Pathway
ndt03420
Nucleotide excision repair
ndt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ndt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L1999_19010
03430 Mismatch repair
L1999_19010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndt03400
]
L1999_19010
Enzymes [BR:
ndt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1999_19010
DNA repair and recombination proteins [BR:
ndt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L1999_19010
MMR (mismatch excision repair)
Other MMR factors
L1999_19010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
Viral_helicase1
AAA_19
UvrD_C_2
PhoH
AAA_30
DUF3861
SLFN-g3_helicase
AAA_16
DEAD
Arg_repressor_C
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ULT55188
LinkDB
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Position
complement(4057417..4059741)
Genome browser
AA seq
774 aa
AA seq
DB search
MSDKESTDLRLEQERVGTVVKVIDQKIKSLQKNTGTVRSDVIEIRKNFWEDVTVNTDEPD
DIIETAASIKQQAELLSERERTHSHLDKNLKTLARLKYSPYFGRIDFLEEGERHVDQVYL
GIASLMDENDETFLIYDWRAPISSLYYDYSPGYAQYKIPEGTIEGEMSLKRQFIIRESDI
KAMFDTGVTIGDEMLQEVLGNNASTQMKSIVATIQREQNEIIRNERSKILIVQGAAGSGK
TSAALQRVAYLLYRYRGTLNAENIMLFSPNPLFNSYVSTVLPELGEENMQQSTFQEYLTQ
RLGKTYDVEDSFSQMEFLLSGNLEKEYQTRLEAIRFKASLEFKTLIDQYVSKLSNQGLIF
KDLSFRGDKIISKKEISEYFYGLESSYSIPNRMQLVKDWLLKELKRAVKRERSQSWVEEE
VQFLEKEDYMEAFKKLQEKNRFSDNTFDDFEREQRLLAEMVVKERFKPLFARVKNFKFID
LTQIYLQLFKEMEPSKKGFLNHWPEMCQQTIDHIQHKAVPYEDATPLVYLQDLLEGRKSN
TAIRHIFIDEAQDYTPFQFAFIQRLFPYSKMTLLGDFNQAIFSGATGSQTVLTDLDNSEK
EVETFVLTKTYRSTREIVEFSSALISDGEKIEPFNRRGEKPTVSHVDEAQLNGKVLGKIK
QYKSAGYQTIAVICRTEAESKALFEELKEEVPIHLIEKGTISYERGINVIPSYLAKGIEF
DAVILYDCSRYQKESERKLFYTACTRAMHALHMFATGENSPLMACVPKDVYDVI
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataaagaaagcaccgacttacgactggagcaggagagagtaggtacggttgta
aaggtcatcgatcaaaagataaagagtctgcaaaaaaatactgggactgtacgctctgat
gttatcgagattcgcaagaacttttgggaagatgttacggtcaacacagatgaaccagat
gacattatagaaacggcagcaagtatcaaacaacaggctgaactgctctcagagcgcgaa
cgtacgcatagtcacttggataaaaatcttaaaacactggcccgattaaaatactcacct
tattttggccggattgatttcctggaagaaggcgagaggcatgttgatcaagtctattta
ggcattgcctcattaatggatgaaaacgacgagacttttttaatttatgattggcgggca
ccgatttcgagtttatattatgattattctccaggctatgcgcaatataaaatacctgaa
ggtaccatagaaggagaaatgtcgctaaaacgtcaatttatcatccgggaatcagatata
aaggcgatgtttgatacaggtgtaacgattggtgacgaaatgcttcaggaagtacttggg
aataatgcgagtacgcaaatgaagagcattgttgccaccatccagcgggaacaaaatgaa
atcatccgaaatgagcgaagtaaaattttaatcgttcagggtgcagcagggagcggaaaa
acctcagcagcattacagcgcgttgcctatttactctatcgttatcggggtaccttgaac
gccgaaaacattatgcttttttcccctaatcctctttttaacagctatgtttcgacagta
ctgcctgaacttggcgaagaaaatatgcagcaatctacatttcaagaatatttaacgcaa
agattgggaaaaacctatgatgttgaggattcattttcacaaatggagtttcttcttagc
ggaaatttggaaaaggaatatcagacaagattggaagctattcgttttaaggccagtctt
gaatttaaaacgttaattgaccagtacgtatctaagttatcaaaccagggcttaatcttt
aaggacttatcctttagaggtgataagattatttctaaaaaagaaattagcgaatatttt
tatgggttggagagcagttattccattccaaaccgaatgcagctggtaaaggattggttg
ttaaaagaattaaagcgcgctgtgaaacgggaacgttctcaaagctgggtagaggaagag
gttcaattccttgaaaaagaggattatatggaagcatttaagaagcttcaagagaagaac
cgcttttcggataatacctttgacgattttgagcgggaacaacggctgcttgctgaaatg
gttgtaaaagaaagatttaaaccgttatttgcaagggtgaaaaactttaaatttattgat
ctaacacaaatataccttcaattgtttaaggaaatggaaccatccaaaaagggctttcta
aaccattggccagagatgtgtcaacaaacaattgatcacatccagcataaagcggttccc
tatgaagatgctacgcctcttgtttacctgcaggatttacttgagggccggaaatcaaac
accgcgattcgccacatttttattgatgaggcacaggattatacaccgttccagtttgcc
tttatccagcgcctgtttccttacagcaaaatgactttgctcggagactttaaccaggcc
atcttctcaggggcaacaggttcgcaaacagttttgactgatttggataacagcgaaaaa
gaggttgaaacttttgtccttaccaaaacctatcgttcaaccagggaaattgtggagttt
tccagtgcacttatttcagatggggaaaaaatcgaaccatttaatcgtagaggggaaaaa
ccaacagtgagccatgtggacgaggcacagttaaatggaaaagttcttgggaaaattaaa
caatataagtcagcaggatatcaaacaattgccgtaatctgtcggacggaggcagaaagt
aaagcattgtttgaggaacttaaagaagaagttccgatccatttaattgaaaaggggacc
atttcttatgaaagaggaattaatgtgattccatcttacttagctaaaggaatagaattt
gacgctgtcattctttatgattgttcccgctatcaaaaagaaagtgagcggaaattattt
tatacggcctgcacacgtgctatgcatgccctccatatgtttgctaccggtgaaaatagt
cctctcatggcttgtgtacctaaggatgtttacgatgttatttaa
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