Neobacillus drentensis: L1999_20755
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Entry
L1999_20755 CDS
T08277
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ndt
Neobacillus drentensis
Pathway
ndt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ndt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1999_20755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndt03019
]
L1999_20755
03400 DNA repair and recombination proteins [BR:
ndt03400
]
L1999_20755
Enzymes [BR:
ndt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1999_20755
Messenger RNA biogenesis [BR:
ndt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L1999_20755
DNA repair and recombination proteins [BR:
ndt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L1999_20755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ULT55512
LinkDB
All DBs
Position
complement(4378346..4379860)
Genome browser
AA seq
504 aa
AA seq
DB search
MELEILLKKYFGYSTFKKGQKEVVTSILSGQHTLAMLPTGTGKSLCYQLPGYIFSGQILI
ISPLLSLMQDQVEQMKRLGEKRVVALNSFLSLTERNKVLRHLREYKFIFISPEMLSVPFV
IRILQGLTISLFVVDEAHCISQWGFDFRPDYSKLGDIRKKLGYPLTLALTATATKKVRED
IVTSLGFENDEIIKIESTIDRPNIAFRFEKLTDYHDKQNRIIELVSQLQKPGIIYFSSKK
AADQMASLLMEKGICQAMAYHGGLDATTRVLIQQQFIHNQLDVVCATSAFGMGINKENIR
FIIHYHMPMQIESYLQEIGRAGRDGLPSVAILLYAPGDEQLPFQLVEGELPSEQQIDWLF
TKLINQRMLNDGVIELNQELSTLGGFSEIQWRIIKEYVNHPDHQITNLEMLKTSLKEFVR
ERFKLKHDNIFYMKKLVDAETCRREFILQYFAEDRFQKIPCCCDICGVNLNDYQTHINTP
SIQAREENWKDYLAKILIKCELSE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaattagaaattcttttaaaaaagtactttggttattctacctttaaaaaaggacaa
aaagaggtggtaacctccatactttctggtcagcatacattagctatgctcccgacagga
acaggaaaatcattgtgttaccaattacctggctatatttttagtgggcagattttgatt
atttctcccttactatctttaatgcaggatcaggtagagcaaatgaagcgattaggagag
aaaagagttgttgcattgaactcttttctttctttgacagagagaaataaggtacttcgt
catttaagagaatataagttcatctttatttcccctgaaatgttaagtgttccatttgtt
attaggattctgcaggggcttactatttctttattcgttgtagacgaagctcattgtatt
tcacaatggggatttgatttccggcccgactattcaaagttaggtgatatccgcaagaaa
ttaggctatcccttaacccttgcacttacagcaactgcaaccaaaaaggtccgcgaagat
attgtaacttcccttgggttcgaaaatgatgaaatcattaaaatagaatcaaccattgat
cggcctaacatagctttccgttttgaaaaattaacggattatcatgataagcaaaatcga
atcatcgaacttgtatcacaactgcaaaaacctggtattatctatttttctagtaaaaag
gctgctgatcaaatggcgtctctcttaatggaaaaagggatttgccaagcaatggcctat
cacgggggattggatgcaacaacgagagtattgattcaacagcagtttattcataatcaa
ctggatgttgtttgtgctacaagtgcgtttggtatgggaatcaataaagaaaatattcgt
tttattatccattatcatatgccgatgcagattgagtcgtatctccaggagattggaagg
gcggggcgggatgggcttccgagtgtcgccattcttttatatgcaccaggtgatgagcag
cttccttttcaacttgtagagggtgaattgccatctgagcagcaaatcgattggttattt
acaaaattaatcaatcagcgtatgttaaacgatggtgtaattgaattaaatcaggagtta
agtacactgggcgggttttcagaaatccaatggcgaatcataaaggaatatgtgaatcat
ccagaccaccagatcactaatcttgagatgttaaaaacttcacttaaagagtttgtaagg
gaaagatttaagctaaagcatgataatatcttctatatgaaaaaactggtcgatgccgaa
acatgcaggcgagaatttattttacagtactttgccgaagacaggttccagaagattcca
tgctgttgtgatatatgcggagtaaatttaaatgattaccaaacacatataaatacacca
tccatacaagctcgtgaagagaactggaaggactaccttgccaaaattctaattaaatgt
gagttgagtgaatga
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