Neobacillus drentensis: L1999_22295
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Entry
L1999_22295 CDS
T08277
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ndt
Neobacillus drentensis
Pathway
ndt03410
Base excision repair
ndt03430
Mismatch repair
ndt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L1999_22295 (recJ)
03430 Mismatch repair
L1999_22295 (recJ)
03440 Homologous recombination
L1999_22295 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndt03400
]
L1999_22295 (recJ)
DNA repair and recombination proteins [BR:
ndt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
L1999_22295 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L1999_22295 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
L1999_22295 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ULT55795
LinkDB
All DBs
Position
complement(4665798..4668161)
Genome browser
AA seq
787 aa
AA seq
DB search
MLKSKTNWIVRKTDHKLAQMLVNELKITPLVASLLVNRGLDTVDSARYFLFGKDGFHDPY
LLIGMETAVERIKEAIDKQEPILIFGDYDADGVSSTSVLMITLRDLGANVQFYIPNRFRE
GYGPNESAFRQAAENGIKLIITVDTGIAAVHEAAVAKELGLDLIITDHHEPGPVLPEALA
IIHPKLPDSTYPFRELAGVGVAFKLAHALYGEVPDHLFEIAVIGTIADLVSLKGENRLIA
KKGLEKLRVTQNIGLRAILKVAGVDLKAINEETIGFTIAPRINAVGRLEDADLAVHLLLT
EDPEEAQSLAEEMDALNKTRQEIVNTITAEAIAEVEKNYPIETNKVLVIGKEGWNPGVIG
IVASRLVEKFYRPTIVLNFDPDKGVAKGSARSILGYDLFKNLSTCRELLPHFGGHPMAAG
MTLKLEDVAELRERLNRLADEQLTDEHLIPLTQLDEKLHLQDISLSSLDELSLLAPFGMD
NPKPKVLIDNVAITSMRKIGSGQNHLKVLVNEEGSTLDGVGFGLGALADQISPVSKISLI
GELSINEWNNNRKPQIFIHDMAVHSWQLFDLRGQKRADHFQTIVPAENRKIIIFNQEHLE
KINPELRSETILIQTIEDAKSFDGLGANIALVDFPPTKDHVKELVSGKEPARIYTYFYKE
ASDYFSTLPTRDHFKWFYAFLLKKGPIDLKLHGETIAKHRGWSQETIKFMSKVFSELDFV
TINNGFITLNTGAPKRDLTDSQTYQTKQAQYALERELLFSSFQELKGWFDQVIQGSVESE
EAIKEWI
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaaatcaaaaactaactggattgttcgcaaaactgatcataaacttgcccaaatg
cttgtaaatgaattgaaaataacacctctggttgcatccctgcttgtaaaccgtggactg
gataccgtagattctgctcggtattttttatttggaaaagatgggtttcatgatccatat
ttacttataggaatggaaacagcggttgaacgaattaaagaggcgattgataaacaagaa
cctattcttatttttggggattacgatgccgatggagtaagcagcacctcggtgttaatg
attacacttcgcgatttaggggcaaatgtccaattttatatccctaatcgttttagagaa
ggatatggaccaaatgaatctgctttccgtcaagcggcggaaaatggtattaaattgatt
atcactgtagatacaggaatagcggctgtgcatgaggcagctgttgcaaaagaacttggc
ctggacttaattattaccgatcaccatgaacctggaccggttttaccagaggcactcgcc
atcattcatcccaaactgcctgatagcacttatccatttcgcgaactggctggagtcggt
gtcgcttttaaactggcccatgccttatatggggaagttcccgatcatttatttgaaatt
gccgtcatcggaacaattgctgacttagtgtcgttgaaaggcgaaaaccgcctgatcgcc
aaaaaaggtcttgaaaaactgagagtaacccaaaatattggcctccgagctattttaaaa
gttgctggggttgaccttaaggcaattaatgaagaaacgattgggtttaccattgcacca
cgaattaatgcggtcggcaggctcgaagatgcagatttagccgttcatttgttattaaca
gaagacccggaggaagctcaaagtctagctgaagaaatggatgcgttaaacaaaacaagg
caggagatcgtcaacaccattacggccgaagcaatcgctgaggttgaaaaaaactacccg
attgagaccaataaagtattggtgattgggaaagaaggctggaatcccggtgttattgga
attgtggcttcaagacttgtcgaaaagttctatcggccaaccatcgtgctaaattttgac
ccggacaaaggtgtcgctaagggttcggcaagaagtattctcggatatgatttatttaaa
aatttatcgacatgcagagaacttctgccccattttggcggacatccgatggcagctggg
atgacattaaaacttgaagacgttgctgaactccgtgagcgccttaaccgcctcgctgac
gagcagctgacagatgaacatttaatcccattaacgcagcttgatgagaagttacatctt
caagatatcagtttatcttccttagatgaactaagtttgctcgccccgtttggcatggat
aacccgaagccaaaagtgttaatcgataatgtggcgattacgagtatgagaaagattggc
agtggacaaaatcatttaaaggtcttagtaaatgaagaaggctccacccttgatggtgta
gggtttggtttaggtgcgcttgctgaccaaatttctcctgtctcaaaaatttcattaatt
ggagaattatctattaatgaatggaataataatcgtaaaccacaaatctttattcacgat
atggctgtccattcgtggcaattatttgatttgcgcggacaaaaacgagcggatcacttc
caaacgattgtacctgctgaaaacaggaaaattattatttttaatcaagagcaccttgaa
aaaataaacccagagttgcggtctgagacgatccttattcaaactattgaagatgccaaa
tcctttgatggattaggagccaatattgctttagttgatttcccgccaaccaaggatcat
gtaaaagaattagtatctggaaaagagcctgcaaggatttatacttatttttataaagaa
gcaagcgattatttttccactctgccaacccgcgaccacttcaaatggttctatgccttt
ctgctaaaaaaaggcccaatcgacttgaagcttcatggtgaaaccatagcgaaacatcgc
ggctggtcgcaggaaacgattaaatttatgtcaaaggtgttttctgaactagattttgtt
acaataaacaatggatttatcactttaaatacgggcgcgccaaagcgtgacctgactgat
tcccaaacttatcaaacaaaacaggcccagtatgctcttgaaagagaattattgttttcc
tcctttcaagaattaaaaggctggttcgatcaagtcattcaaggatcggttgaatctgag
gaggcaattaaagaatggatttaa
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integrated database retrieval system
