Neobacillus drentensis: L1999_25435
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Entry
L1999_25435 CDS
T08277
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
ndt
Neobacillus drentensis
Pathway
ndt02020
Two-component system
ndt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ndt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L1999_25435 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L1999_25435 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndt03021
]
L1999_25435 (rpoN)
Transcription machinery [BR:
ndt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L1999_25435 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_23
Sigma70_r4_2
HTH_Crp_2
HTH_11
HTH_21
MarR
LexA_DNA_bind
HTH_6
MarR_2
HTH_20
HTH_38
Fe_dep_repress
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ULT59948
LinkDB
All DBs
Position
complement(5339747..5341066)
Genome browser
AA seq
439 aa
AA seq
DB search
MDLKPGLWQQQTLKLTMTQELSQAIALLQYSAQELAAFLEDKALENPLLKVENVNVKPMN
PLIDRNRRKHQKSEKDWIEQIADKPFSLEEYLLSQLNIKNLTAEQMKVIRHLIKNIDENG
YFTGSLSEIALKLHVELESIEDCLAIIQTLEPAGIGARDLQECLALQCYYKNPNNELAQT
ILSTYFIPFAEKKWKPIAKELGVSLKDLQDVFDEIQQLNPKPGALLHQERTTYIIPDAII
EQTSEGLTVRMFDESLPRIRFNEPYYQKFHKQNQQVSRFLQDKVQDYQWILKSIEQRKET
LTKVVAKIVEKQPAFFQKGSQYLVPMTMKEIASELEIHESTVSRAVREKYVQTPIGTYPL
KTFFTSTIQTSDDESTSSTLVKNEIGFLVAQENKEKPLSDQEMVELLKRQKGILVSRRTV
AKYREQLGIPSSTKRKRFV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaccgggtttatggcagcagcaaacattaaaattaaccatgacgcaggag
ttgtcgcaggcaatcgccttattgcagtactctgcccaggagctggctgcatttttagaa
gataaggcattggaaaatcctctccttaaagtcgaaaatgtgaatgttaaaccgatgaat
ccgttgatcgatcgtaaccgtcggaagcatcaaaagtcggaaaaggactggattgaacag
attgcagacaagcccttttcgcttgaggaatacttactctctcaacttaacattaaaaac
ttaacggctgagcaaatgaaagtgattcggcacttgatcaaaaatatagatgaaaacggt
tactttacggggagtctttctgaaattgccctaaaattgcacgtagagttagaatccatt
gaggactgcctcgcgattattcaaacactcgagccggctggcattggggcaagagatttg
caagaatgtttagctttgcaatgttattataaaaatccaaacaacgaactagcgcaaacg
attctatcaacatactttattccctttgctgaaaaaaagtggaagccgattgcaaaagaa
ttaggtgtgagcttgaaggatctgcaagatgtctttgatgaaatccagcagctcaaccca
aaacctggtgcattactccatcaggagcgaaccacctatattattcccgatgcgattatt
gagcaaaccagtgagggattaacggttcgaatgtttgatgaatctctgccgcggattcgc
tttaatgagccttattatcaaaagtttcataaacaaaatcagcaggtcagccgtttcctg
caggataaagtccaagactaccaatggatcttaaaaagtattgaacaacggaaagaaact
cttacaaaggtagtagccaagattgtagaaaaacaaccggccttttttcaaaagggaagc
caatatttagtgcccatgacaatgaaagaaatcgccagtgaacttgaaattcatgaatct
accgtcagccgggctgtccgggaaaaatatgtgcaaacaccaataggcacctatccatta
aaaactttttttactagtacgattcaaacctcagacgatgagagtacatcttccacactg
gtaaagaatgaaattggtttcttggtggcccaggaaaataaggaaaaaccgctatcggac
caagagatggttgaactgctgaagaggcaaaagggaatcctagtttcacgaagaaccgtg
gctaagtaccgggagcagctaggaattccatcgtcaacaaaaaggaaacggtttgtgtaa
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