Neisseria dumasiana: LVJ88_01455
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Entry
LVJ88_01455 CDS
T08094
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
ndu
Neisseria dumasiana
Pathway
ndu02020
Two-component system
ndu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ndu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LVJ88_01455 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LVJ88_01455 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndu03021
]
LVJ88_01455 (rpoN)
Transcription machinery [BR:
ndu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LVJ88_01455 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
HTH_23
HTH_Tnp_ISL3
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
UOO84709
LinkDB
All DBs
Position
329519..330874
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AA seq
451 aa
AA seq
DB search
MSQNLGLKLKQTQQLNQHLQQSLRILQMSGLELEREVDDWLQDNPLLERAESSEDESGDN
EFTQVSAALPKGKQVGGEDAEDVWATIAEEDDFNAFLHKQVCEHPMSGQEAARVHILIDF
LDDQGYFTDSLSDVLDHTPLEWMLEENDLQEALDLLQTFDPPGVGAANLAESLMLQLMRL
PASPARQLAARIIHIGLDDLGRSRQQNIARFRKQFPEADAETLQTALDLIGKLNPYPAYG
FASAEPTAYVQPDVWVKETKSGWTVAGNEQAWPKVRINSEYCQLLKEAGEISPEWKEKLS
EARQKIDSLELRKSTVLRLAEYIVEKQEDFFVFGEIGLTPMLIKDAASELGVAESTVSRA
VNHKYLSCPRGVFALRYFFTQAVSAEDGEGVSQSAVKAVIAQLIEGENKLKPYSDEALSS
LLKQQGIDIARRTVAKYREALNIPSAHQRKP
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaatctcggactaaaactcaaacaaacccagcagctcaaccagcatctgcaa
caatcgttgcgcatactgcaaatgtcgggcttggagcttgagcgcgaagtggacgactgg
cttcaagacaacccgctgctggaacgtgccgaaagcagcgaagacgaaagcggcgacaac
gaatttacccaagtttccgccgccctgcccaaaggcaaacaagtgggcggcgaagatgcc
gaagacgtgtgggcgaccattgccgaagaagacgatttcaacgcctttttgcacaaacag
gtgtgcgaacaccccatgagcgggcaagaagccgcccgcgtacatatcctgattgatttt
cttgatgaccaaggctacttcaccgacagcctgagcgatgttctcgaccatacccctttg
gaatggatgctcgaagaaaacgacctccaagaagcactcgacctgctgcaaaccttcgac
ccacccggtgtcggtgcagccaatctggccgaatcgctgatgctccaacttatgcgccta
ccggcttctcccgcccgccaactggccgccagaatcatccatatcggtttggacgactta
gggcgcagccgccagcagaatattgcccgcttccgcaaacagtttcccgaagccgatgcc
gaaacccttcagacggccttagacctgatcggcaaactcaatccttatcccgcctacgga
tttgcctcggccgaacccaccgcttatgttcagcccgacgtttgggtaaaagaaaccaaa
agcggctggacggtagccggaaacgagcaggcatggccgaaagtgcggatcaacagcgaa
tactgccaactgcttaaagaagcgggcgaaatcagccccgaatggaaagaaaaactcagc
gaagcacgccaaaaaatagacagtttggaactgcgcaaaagcaccgtgctgcggctggca
gaatatatcgtcgaaaaacaggaagattttttcgtgttcggcgaaatcggcctgaccccc
atgctgattaaagatgccgcctccgaattaggcgtggccgaaagcaccgtatcccgtgcc
gtcaaccacaaatatttgtcttgcccgcgcggtgtgtttgcgttacgctattttttcacg
caggccgtatccgccgaagacggagaaggcgtgagccaaagcgcagttaaggccgtgatt
gcccagctgatcgaaggggaaaacaagctcaaaccctattcggacgaagccttaagcagc
ctgctcaaacaacagggtatcgacatcgcacggcgcaccgtagccaaataccgtgaggcc
ttgaatattccgagcgcgcaccaacgtaaaccctaa
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