Neisseria dumasiana: LVJ88_01500
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Entry
LVJ88_01500 CDS
T08094
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ndu
Neisseria dumasiana
Brite
KEGG Orthology (KO) [BR:
ndu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ndu03000
]
LVJ88_01500
Transcription factors [BR:
ndu03000
]
Prokaryotic type
Helix-turn-helix
Other families
LVJ88_01500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_22
HTH_23
HTH_7
HTH_11
HTH_28
HTH_29
AAA_5
HTH_30
HTH_17
PAS_4
HTH_50
HTH_Tnp_ISL3
DUF6137
Terminase_5
P22_Cro
IclR_C
PAS
HTH_36
HTH_10
Mg_chelatase
TetR_N
TrmB
HTH_38
HTH_24
AAA_2
HTH_IclR
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
UOO84717
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Position
341436..343361
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AA seq
641 aa
AA seq
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MLAKQTRHIRDVLALVYGDGLSRSPIDPSIAASWQRCVHRHGLDPEQLCEAIILPHHDLV
EHLDAMDNLTAVARHGMQVLWQQIRDMGYVVLLADEHGVVVEAFGFERQKTELCRAGLHL
GALWREHTNGTSAVGMVLATGDASIVHRADHFDATHIGLTCTAAPVFDSHNRLRAVLDVS
ALTPPSAKHSQYWVLQLVRHFAGLVETAALLQAHRRHWIVRLGHAAEFLNVSPEFLIAVD
DDGKISGANHAFHEWAAAHLDIPVGQVIGRLFDLLSDTGLTAVYSASGGHTALTLGGNRL
FAAASAPICRPVPASAREPELPDALAALYSPKSRYRRSLQRVAALADTPVPILINGETGS
GKEFLARAIHLSSSRADKPFIAVNCAAIPENLIESELYGYAPHSFSGADRKGKIGLIQAA
DGGTLFLDEIGDMPLYLQSRLLRVLSEREVVPVGSVRAVKVDIRVISATHADVQERIACG
KFREDLYYRLNSTHVQLPPLRERDDFDYIMRMILERAAEKTGRPPKALSARTLDTLRAYD
WPGNLRQLAAVLEVALLTSLGTRIEYDDLPDYIKTAARPFFHEPSVTAAEQQPAEKSVLN
RADSLQAALLNHQGNVSALAKHLGVSRMTVYRYLKKYGLDR
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgctggccaaacaaacccgacatatccgcgatgtgctggcacttgtctatggcgacgga
ttgtcccgttcaccaatcgatccgagtatcgccgcctcttggcaacgctgcgtgcaccgg
cacggccttgaccccgaacaactgtgcgaagccatcatcctgccccatcatgatttagtc
gaacatctcgatgccatggacaacctgacggctgttgcccgccacgggatgcaggtgttg
tggcagcaaatccgcgacatgggctatgtggttttgctggcagacgaacacggcgtggtg
gtggaagcgttcggattcgagcggcaaaaaaccgagttgtgccgcgcaggattgcatttg
ggcgcactttggcgcgaacacaccaacggcaccagtgcggtcggcatggtgctggcaacg
ggcgatgcttcgatagtccaccgtgccgaccacttcgatgccacccatatcggccttacc
tgcaccgctgcgcccgtgttcgattcgcataaccgcctgcgtgccgtgcttgatgtgtct
gcgctcaccccgccttcggccaagcacagccaatattgggtattgcagctggtgcgccat
ttcgccggtttggtggaaacggcggctctgttgcaggcgcaccgccgccattggattgtg
cggctcggccatgccgccgagtttttaaatgtttcgcccgaatttctgattgccgtggat
gacgacggcaaaatcagcggtgccaaccatgcctttcacgaatgggcggcagcgcatttg
gatattcctgtcgggcaggttatcggcaggctgttcgatttactctccgacaccggcctg
actgccgtttactccgcttcaggcggccacaccgccctgacgctgggcggcaaccgcctg
tttgccgcagcttccgcccccatctgccgacccgtgcccgcctctgcgcgcgagccggag
ctgcctgacgcacttgccgccttatacagcccgaaaagccgttaccgccgcagtttgcag
cgggtggccgctctggccgacacgcccgtgccgatactgattaacggcgaaaccggttcg
ggcaaagagtttctcgcccgcgccatccacctctcaagcagccgtgccgacaaaccgttt
atcgcggtcaactgtgcggcgattcctgaaaacctgattgaaagcgagctttacggatat
gcgccgcacagtttttcaggtgccgaccgcaaaggcaaaatcggcttgattcaggcggcc
gacggcggcacgctgtttctcgacgaaatcggcgacatgccgctttatctgcaatcgcgg
ctgctgcgcgtattgtccgagcgggaagtggtgccggtgggcagcgtgcgcgccgttaaa
gtggatatccgtgtgatttcggccacccatgccgatgtgcaggaacggattgcctgcggg
aaattccgcgaagacctgtattaccgcctcaacagcacccatgtgcagctgccgcccttg
cgggaacgcgatgatttcgattacatcatgcgcatgattttggagcgtgccgccgaaaaa
accggccgcccgcccaaagctttgtctgcccgcacactcgataccctccgcgcctacgat
tggcccggcaacctgcgccaactggccgctgtgcttgaagtggcgttgctcacttcactt
ggcacgcgcatcgaatatgatgatttgccggactacatcaaaaccgccgcccgcccgttt
ttccatgaaccgtctgttaccgcagcggaacagcaaccggcggaaaaatcggttctgaac
cgcgccgacagtctgcaagccgcattgctgaatcatcagggcaatgtttccgctctggcc
aaacacctcggtgtcagccgcatgacggtgtaccgttatttgaaaaaatacggtttggat
cgctga
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